SRR3548995_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3548995_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	200843
Sequences flagged as poor quality	0
Sequence length	51
%GC	49

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	463	0.23052832311805738	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	426	0.21210597332244588	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTTGATG	20	7.0193695E-4	45.000004	1
GGTACAT	20	7.0193695E-4	45.000004	8
CCCTCGT	20	7.0193695E-4	45.000004	14
GTACACT	20	7.0193695E-4	45.000004	18
GGATACA	20	7.0193695E-4	45.000004	8
GTTGTAG	20	7.0193695E-4	45.000004	1
GCTAGTT	20	7.0193695E-4	45.000004	9
TGAGCTT	20	7.0193695E-4	45.000004	30
CGATCTG	20	7.0193695E-4	45.000004	10
CGATAGT	20	7.0193695E-4	45.000004	12
TACGTAG	20	7.0193695E-4	45.000004	1
CTAGCGA	20	7.0193695E-4	45.000004	14
ACTATAG	25	3.879275E-5	45.0	1
CGACAGG	25	3.879275E-5	45.0	2
CAGGGCG	55	1.8189894E-12	45.0	5
AATGCGG	25	3.879275E-5	45.0	2
CTTGCGG	25	3.879275E-5	45.0	2
GTACTGG	25	3.879275E-5	45.0	2
GCGATTG	25	3.879275E-5	45.0	9
GCGATCT	25	3.879275E-5	45.0	9