SRR3548984_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3548984_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2166219
Sequences flagged as poor quality	0
Sequence length	51
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2294	0.10589880339891766	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGTGCTA	35	1.2125929E-7	45.000004	35
ACGTTAG	30	2.1663946E-6	45.000004	1
ATAGCCG	20	7.034669E-4	45.000004	2
GAACGTA	35	1.2125929E-7	45.000004	9
CACGTTA	30	2.1663946E-6	45.000004	38
CACGTGC	30	2.1663946E-6	45.000004	37
CAGTACG	70	0.0	45.000004	1
TACGTTC	20	7.034669E-4	45.000004	31
CGAATCT	25	3.8919534E-5	45.0	38
TAGTCCG	25	3.8919534E-5	45.0	24
TAACTCG	25	3.8919534E-5	45.0	38
AAGTACG	60	3.6379788E-12	41.250004	1
TACGGGT	60	3.6379788E-12	41.250004	4
CGAATAT	250	0.0	40.499996	14
GGACTAA	560	0.0	40.178574	8
CTATGCG	45	1.929584E-8	40.0	1
ATACGTA	45	1.929584E-8	40.0	36
TGTCCGA	45	1.929584E-8	40.0	41
CTACCTT	350	0.0	39.857143	17
GACTAAT	530	0.0	39.481133	9