SRR3548951_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3548951_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1688666
Sequences flagged as poor quality	0
Sequence length	51
%GC	40

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	12595	0.7458550121812129	No Hit
AAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG	2002	0.11855511984015786	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ATCGTAG	45	3.8562575E-10	45.000004	1
GTCGACG	20	7.034228E-4	45.0	1
TACGCTA	25	3.8915863E-5	45.0	1
TCTACCG	20	7.034228E-4	45.0	32
TCGCTAA	20	7.034228E-4	45.0	12
CAGTCCG	55	1.8189894E-12	45.0	38
CGCAACA	25	3.8915863E-5	45.0	27
TTCGACA	20	7.034228E-4	45.0	12
ACGACCG	40	6.8175723E-9	45.0	1
TGCGTCG	20	7.034228E-4	45.0	2
TACGGGT	115	0.0	44.999996	4
ACGGGTA	125	0.0	44.999996	5
CGTTTTT	9750	0.0	42.876923	1
ACGTTCG	80	0.0	42.1875	13
GGCGATT	655	0.0	41.908398	8
ACGGCAT	60	3.6379788E-12	41.249996	45
GGATGCC	2860	0.0	41.145103	8
TTTACGG	115	0.0	41.086956	2
TAGCGGA	115	0.0	41.086956	3
CACGACG	115	0.0	41.086956	26