##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3548837_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 375233 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.302681267372538 31.0 31.0 34.0 30.0 34.0 2 31.499574930776344 31.0 31.0 34.0 30.0 34.0 3 31.469263097861862 31.0 31.0 34.0 30.0 34.0 4 35.447529934733886 37.0 35.0 37.0 33.0 37.0 5 35.127656682647846 37.0 35.0 37.0 32.0 37.0 6 35.182689155804525 37.0 35.0 37.0 32.0 37.0 7 35.06979663302535 37.0 35.0 37.0 32.0 37.0 8 35.423640777863355 37.0 35.0 37.0 33.0 37.0 9 35.895294390418755 39.0 37.0 39.0 32.0 39.0 10 35.80789802602649 38.0 35.0 39.0 30.0 39.0 11 36.17463549314692 38.0 35.0 39.0 32.0 39.0 12 35.615422950540065 37.0 35.0 39.0 31.0 39.0 13 35.2012802711915 37.0 34.0 39.0 30.0 39.0 14 36.12145786751165 38.0 35.0 40.0 30.0 41.0 15 36.38908891275554 38.0 35.0 40.0 31.0 41.0 16 36.47242646568932 38.0 35.0 40.0 31.0 41.0 17 36.48029091257965 38.0 35.0 40.0 31.0 41.0 18 36.278251113308265 38.0 35.0 40.0 31.0 41.0 19 36.27066382754182 38.0 35.0 40.0 31.0 41.0 20 36.27172983186447 38.0 35.0 40.0 31.0 41.0 21 36.27788867183857 38.0 35.0 40.0 31.0 41.0 22 36.24983143806648 38.0 35.0 40.0 31.0 41.0 23 36.250657591416534 38.0 35.0 40.0 31.0 41.0 24 35.849115083161664 37.0 34.0 40.0 30.0 41.0 25 35.9302646622232 37.0 34.0 40.0 30.0 41.0 26 35.83240013538255 37.0 34.0 40.0 30.0 41.0 27 35.708967494863195 37.0 34.0 40.0 30.0 41.0 28 35.58729909149782 37.0 34.0 40.0 29.0 41.0 29 35.42088782170012 37.0 34.0 40.0 29.0 41.0 30 35.41422795969438 37.0 34.0 40.0 29.0 41.0 31 35.24779536981023 37.0 34.0 40.0 29.0 41.0 32 35.140752545751575 37.0 34.0 40.0 28.0 41.0 33 35.01918541279685 37.0 34.0 40.0 27.0 41.0 34 35.087940026596804 37.0 34.0 40.0 28.0 41.0 35 34.84995989158736 36.0 34.0 40.0 27.0 41.0 36 34.73196387311351 36.0 34.0 40.0 26.0 41.0 37 34.52414100039176 36.0 33.0 40.0 25.0 41.0 38 34.496901924937305 36.0 33.0 40.0 26.0 41.0 39 34.46789594731807 36.0 33.0 40.0 25.0 41.0 40 34.2222592362612 36.0 33.0 40.0 24.0 41.0 41 34.365921973813606 36.0 33.0 40.0 25.0 41.0 42 34.369010721338476 36.0 33.0 40.0 25.0 41.0 43 34.26324976747781 35.0 33.0 40.0 25.0 41.0 44 34.23488072744135 35.0 33.0 39.0 25.0 41.0 45 34.016205930715046 35.0 33.0 39.0 24.0 41.0 46 33.87843553205608 35.0 33.0 39.0 23.0 41.0 47 33.7904262151783 35.0 33.0 39.0 23.0 40.0 48 33.77061185983109 35.0 33.0 39.0 23.0 40.0 49 33.650505152798395 35.0 33.0 39.0 23.0 40.0 50 33.4766052026341 35.0 33.0 39.0 23.0 40.0 51 31.633211897674244 34.0 30.0 38.0 18.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 2.0 9 3.0 10 8.0 11 6.0 12 10.0 13 16.0 14 14.0 15 25.0 16 69.0 17 150.0 18 339.0 19 641.0 20 1089.0 21 1575.0 22 2069.0 23 2775.0 24 3341.0 25 3839.0 26 4467.0 27 5349.0 28 6622.0 29 8191.0 30 10759.0 31 14201.0 32 18898.0 33 26992.0 34 45863.0 35 47049.0 36 35469.0 37 45430.0 38 53572.0 39 36399.0 40 1.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 18.09622288018378 35.749520964307514 20.023292194449848 26.13096396105886 2 22.529201855913524 36.58793336406979 20.443830899734298 20.439033880282384 3 20.814267401854313 31.005801728526013 22.49295770894351 25.686973160676168 4 21.84189556888653 33.107695751706274 18.36965298894287 26.680755690464323 5 17.259942489066795 37.47351645510923 17.27646555606783 27.990075499756152 6 18.959419880447616 37.480978485367764 21.87520820396927 21.68439343021536 7 77.87108276724062 10.15848819266962 6.460785698486007 5.50964334160375 8 80.20723124032268 6.974066779840793 4.974775672715353 7.843926307121175 9 74.36899206626283 11.807330378724686 8.653290089091312 5.170387465921174 10 48.24868814843044 25.908702059786854 11.92672286286121 13.915886928921498 11 40.30695594470636 24.521030932780434 19.052695258679275 16.11931786383394 12 37.3304053747938 23.928332529388406 24.473060738261292 14.268201357556503 13 24.27718244397481 37.528948679886895 20.11683407376217 18.077034802376126 14 15.754477884407821 40.232868644282355 28.002068048385937 16.01058542292389 15 14.821990603171894 27.64469009921835 37.282168679193994 20.251150618415757 16 15.71716773311516 24.64975095474012 39.13248568222944 20.50059562991528 17 16.42099708714319 24.79526054478151 26.093920310846862 32.68982205722844 18 21.933838441714883 26.284202082439446 27.32302329485946 24.458936180986214 19 24.267854906151644 30.70305650089411 25.26563495214973 19.763453640804514 20 28.605959497165763 27.979681957610335 22.18301695213374 21.23134159309016 21 21.430417900344587 30.41416932945663 23.87796382514331 24.277448945055472 22 19.67737379175073 30.873084190356394 24.077839635639723 25.371702382253158 23 21.111949108953638 30.213760516798892 20.277800726481946 28.39648964776552 24 18.987668994997776 30.78780384454459 28.561453816695227 21.66307334376241 25 18.00694501816205 26.234099879275007 30.20576548437904 25.553189618183904 26 20.70580146202493 33.79020501928135 22.839942115965282 22.66405140272844 27 17.630112490106146 33.422433527967954 26.38813750389758 22.559316478028318 28 18.34966540789323 30.04879634786919 31.989190716168352 19.612347528069225 29 20.52937774662676 29.744452113753322 28.872727078908305 20.85344306071161 30 21.474657079734456 30.93517894215061 25.27869350510216 22.31147047301277 31 27.45574083302908 31.772258836509582 19.32692487068035 21.44507545978099 32 29.238633062657073 29.238899563737732 20.969637531880192 20.55282984172501 33 25.522808494988446 29.431046842894947 23.703938619471103 21.342206042645504 34 22.58916459906245 28.75413409801377 22.30320893951225 26.353492363411533 35 21.40083628039112 30.31822894041835 25.887648474414565 22.393286304775966 36 28.021522627274255 27.7478260174345 25.17209307283741 19.058558282453834 37 22.15316883109961 34.08655422097737 22.169425397019985 21.59085155090304 38 23.181596501373814 31.705367065263452 21.88720075259905 23.225835680763684 39 24.331815165510495 26.8438543518294 24.416562509160975 24.407767973499134 40 24.364328297351246 27.271055584130394 21.65907582755248 26.705540290965878 41 19.19260832602676 23.368946761079116 28.38742861102302 29.0510163018711 42 26.16854061343219 26.665032126705274 21.499441680236014 25.666985579626527 43 22.916161425034577 26.11177588325121 25.734676854114642 25.237385837599575 44 21.462398030024012 27.031471112615364 25.50015590313219 26.00597495422844 45 22.54838993372118 31.686978490697783 22.82128704031895 22.943344535262092 46 20.904877769279352 28.175027249735496 28.527341678370504 22.392753302614643 47 21.55514040609435 26.82333376861843 24.890401430577803 26.731124394709422 48 23.115237732289003 22.184615958617712 31.42234291760053 23.277803391492753 49 22.40234734151847 21.676398397795506 29.63518667068195 26.286067590004077 50 20.672488826942192 26.60533588463701 26.329773767232627 26.39240152118817 51 18.66813419928418 27.487187960547182 28.57850988585759 25.266167954311054 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 3511.0 1 2685.0 2 1859.0 3 1296.0 4 733.0 5 669.0 6 605.0 7 617.0 8 629.0 9 693.5 10 758.0 11 820.0 12 882.0 13 968.5 14 1055.0 15 1094.5 16 1134.0 17 1085.0 18 1036.0 19 1131.5 20 1227.0 21 1187.0 22 1147.0 23 1302.5 24 1458.0 25 1536.0 26 1677.5 27 1741.0 28 2301.0 29 2861.0 30 3287.0 31 3713.0 32 4470.0 33 5227.0 34 5416.0 35 5605.0 36 6317.5 37 7030.0 38 8470.0 39 9910.0 40 12170.5 41 14431.0 42 20086.0 43 25741.0 44 34713.0 45 43685.0 46 43358.5 47 43032.0 48 40317.0 49 37602.0 50 34368.5 51 31135.0 52 28797.0 53 26459.0 54 23460.5 55 20462.0 56 19078.5 57 17695.0 58 16415.0 59 15135.0 60 14492.5 61 13850.0 62 11908.0 63 9966.0 64 8892.5 65 7819.0 66 6195.0 67 4571.0 68 4008.5 69 3446.0 70 2809.5 71 2173.0 72 1817.0 73 1461.0 74 1392.5 75 976.0 76 628.0 77 441.0 78 254.0 79 283.0 80 312.0 81 243.5 82 175.0 83 123.5 84 72.0 85 52.0 86 32.0 87 30.0 88 28.0 89 16.0 90 4.0 91 3.0 92 2.0 93 2.0 94 2.0 95 1.0 96 0.0 97 0.0 98 0.0 99 1.0 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 375233.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 27.17282431894003 #Duplication Level Percentage of deduplicated Percentage of total 1 79.60627179787949 21.63127238249569 2 9.170179343099734 4.98359344526444 3 3.093756513153335 2.521983066524762 4 1.5130884677583172 1.6445954845364363 5 0.8264662088354255 1.122871054911271 6 0.48768326204404094 0.795103896168619 7 0.35377012952299264 0.6729053505171857 8 0.2678259671297027 0.5822070362292494 9 0.16789090442300847 0.4105863045570925 >10 2.6872538208928956 18.58527596890336 >50 1.4270726873304864 27.890812663307518 >100 0.3877480410953983 13.403253185558542 >500 0.004996753106899463 0.8716812416557178 >1k 0.005996103728279355 4.8838589193701205 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source AATGATACGGCTGTCTCTTATACACATCTGACGCTGAAGCCATCGTATGCC 3862 1.0292271735161886 No Hit AATGATACCTGTCTCTTATACACATCTGACGCTGAAGCCATCGTATGCCGT 3532 0.9412818168977676 No Hit CTGTCTCTTATACACATCTGACGCTGAAGCCATCGTATGCCGTCTTCTGCT 3258 0.8682605207964118 No Hit AATCTGTCTCTTATACACATCTGACGCTGAAGCCATCGTATGCCGTCTTCT 3213 0.8562679721666272 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 3102 0.8266863522131582 No Hit AAACTGTCTCTTATACACATCTGACGCTGAAGCCATCGTATGCCGTCTTCT 1018 0.27129810011379596 No Hit AAAAACTGTCTCTTATACACATCTGACGCTGAAGCCATCGTATGCCGTCTT 730 0.19454578888317392 No Hit AATGACTGTCTCTTATACACATCTGACGCTGAAGCCATCGTATGCCGTCTT 727 0.1937462856411883 No Hit CAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 603 0.1607001516391149 No Hit CTTCGAGGGAGGCTGGAGAGATGGCTCAGAGGTTAAGAGCACTGACTGCTC 601 0.16016714947779115 No Hit AATGATCTGTCTCTTATACACATCTGACGCTGAAGCCATCGTATGCCGTCT 549 0.14630909328337327 No Hit TGCAAAGGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGG 496 0.13218453600829352 No Hit AACTGTCTCTTATACACATCTGACGCTGAAGCCATCGTATGCCGTCTTCTG 496 0.13218453600829352 No Hit GAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 482 0.12845352087902717 No Hit AATGCTGTCTCTTATACACATCTGACGCTGAAGCCATCGTATGCCGTCTTC 473 0.12605501115307022 No Hit AATGATACGGCGACTGTCTCTTATACACATCTGACGCTGAAGCCATCGTAT 408 0.1087324409100479 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.665010806618821E-4 0.0 0.0 1.120637044183214 0.0 2 2.665010806618821E-4 0.0 0.0 1.340233934648605 0.0 3 2.665010806618821E-4 0.0 0.0 1.7303915167376003 0.0 4 2.665010806618821E-4 0.0 0.0 4.0814640503367245 0.0 5 2.665010806618821E-4 0.0 0.0 4.450834548134092 0.0 6 2.665010806618821E-4 0.0 0.0 5.8305106427206566 0.0 7 2.665010806618821E-4 0.0 0.0 6.857339306510888 0.0 8 2.665010806618821E-4 0.0 0.0 7.428984124530625 0.0 9 2.665010806618821E-4 0.0 0.0 9.32300730479462 0.0 10 2.665010806618821E-4 0.0 0.0 10.534254716402875 0.0 11 2.665010806618821E-4 0.0 0.0 13.010582757913083 0.0 12 2.665010806618821E-4 0.0 0.0 13.708549088166553 0.0 13 2.665010806618821E-4 0.0 0.0 14.074455071915317 0.0 14 2.665010806618821E-4 0.0 0.0 14.532836930653755 0.0 15 2.665010806618821E-4 0.0 0.0 14.79560699618637 0.0 16 2.665010806618821E-4 0.0 0.0 15.314751101315716 0.0 17 2.665010806618821E-4 0.0 0.0 15.890926437706705 0.0 18 2.665010806618821E-4 0.0 0.0 16.787702574133938 0.0 19 2.665010806618821E-4 0.0 0.0 17.120562423880628 0.0 20 2.665010806618821E-4 0.0 0.0 17.447026247691433 0.0 21 2.665010806618821E-4 0.0 0.0 17.788947134180628 0.0 22 2.665010806618821E-4 0.0 0.0 18.107149424490917 0.0 23 2.665010806618821E-4 0.0 0.0 18.444273291528198 0.0 24 2.665010806618821E-4 0.0 0.0 18.670532709010136 0.0 25 2.665010806618821E-4 0.0 0.0 18.872274027071178 0.0 26 2.665010806618821E-4 0.0 0.0 19.068685323518988 0.0 27 2.665010806618821E-4 0.0 0.0 19.249639557288404 0.0 28 2.665010806618821E-4 0.0 0.0 19.439121825639003 0.0 29 2.665010806618821E-4 0.0 0.0 19.642995152345343 0.0 30 2.665010806618821E-4 0.0 0.0 19.938278349718708 0.0 31 2.665010806618821E-4 0.0 0.0 20.1802613309597 0.0 32 2.665010806618821E-4 0.0 0.0 20.38013714145611 0.0 33 2.665010806618821E-4 0.0 0.0 20.59680252003422 0.0 34 2.665010806618821E-4 0.0 0.0 20.803074356466514 0.0 35 2.665010806618821E-4 0.0 0.0 21.067443428483102 0.0 36 2.665010806618821E-4 0.0 0.0 21.27264926059275 0.0 37 2.665010806618821E-4 0.0 0.0 21.472525071089162 0.0 38 2.665010806618821E-4 0.0 0.0 21.663872847004395 0.0 39 2.665010806618821E-4 0.0 0.0 21.898926800148175 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATAGCGG 45 3.8380676E-10 45.000004 2 CTAACGG 45 3.8380676E-10 45.000004 2 TCTACAG 45 3.8380676E-10 45.000004 1 CGGTAGT 45 3.8380676E-10 45.000004 12 TCGACAA 45 3.8380676E-10 45.000004 19 ATCGACA 45 3.8380676E-10 45.000004 18 TGCAACG 45 3.8380676E-10 45.000004 1 TAATCAC 25 3.885766E-5 45.0 38 AACGTTG 20 7.027207E-4 45.0 1 AAACTTG 25 3.885766E-5 45.0 44 TTTAGCG 20 7.027207E-4 45.0 41 ATCCTAC 20 7.027207E-4 45.0 28 CGGGTAT 75 0.0 45.0 6 CTAGAAC 25 3.885766E-5 45.0 13 TCGTTTG 20 7.027207E-4 45.0 41 TCGTTTA 20 7.027207E-4 45.0 10 AGCCGAA 20 7.027207E-4 45.0 25 GGTACGT 25 3.885766E-5 45.0 8 GGTACCT 25 3.885766E-5 45.0 8 AAATCGA 25 3.885766E-5 45.0 28 >>END_MODULE