##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3548810_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 364224 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.372136377613778 31.0 31.0 34.0 30.0 34.0 2 31.559315146722895 31.0 31.0 34.0 30.0 34.0 3 31.733438762959057 31.0 31.0 34.0 30.0 34.0 4 35.53582410824108 37.0 35.0 37.0 33.0 37.0 5 35.1195692760499 37.0 35.0 37.0 32.0 37.0 6 35.133519482516256 37.0 35.0 37.0 32.0 37.0 7 35.09194067387102 37.0 35.0 37.0 32.0 37.0 8 35.41943693990511 37.0 35.0 37.0 33.0 37.0 9 36.35903180460376 39.0 37.0 39.0 32.0 39.0 10 36.08349257599719 38.0 35.0 39.0 31.0 39.0 11 36.271368718151464 38.0 35.0 39.0 32.0 39.0 12 35.73589329643296 37.0 35.0 39.0 31.0 39.0 13 35.44613479616939 37.0 35.0 39.0 30.0 39.0 14 36.41584574327886 38.0 35.0 40.0 31.0 41.0 15 36.48064927077842 38.0 35.0 40.0 31.0 41.0 16 36.513085354067826 38.0 35.0 40.0 31.0 41.0 17 36.47069660428747 38.0 35.0 40.0 31.0 41.0 18 36.27260422157793 38.0 35.0 40.0 30.0 41.0 19 36.24299606835354 38.0 34.0 40.0 30.0 41.0 20 36.2606692584783 38.0 34.0 40.0 30.0 41.0 21 36.307055548234054 38.0 35.0 40.0 31.0 41.0 22 36.3126372781585 38.0 35.0 40.0 31.0 41.0 23 36.258417896678964 38.0 35.0 40.0 31.0 41.0 24 35.92559523809524 38.0 34.0 40.0 30.0 41.0 25 36.01121287998594 38.0 34.0 40.0 30.0 41.0 26 35.86969282639255 38.0 34.0 40.0 30.0 41.0 27 35.80840911087682 38.0 34.0 40.0 30.0 41.0 28 35.70274336671938 38.0 34.0 40.0 30.0 41.0 29 35.41571121068353 37.0 34.0 40.0 29.0 41.0 30 35.461861382006674 37.0 34.0 40.0 29.0 41.0 31 35.08597181953962 37.0 34.0 40.0 27.0 41.0 32 35.12225992795642 37.0 34.0 40.0 27.0 41.0 33 35.06567936215077 37.0 34.0 40.0 27.0 41.0 34 34.785747232472325 37.0 34.0 40.0 26.0 41.0 35 34.817985635213496 37.0 33.0 40.0 26.0 41.0 36 34.3716504129327 36.0 33.0 40.0 24.0 41.0 37 34.4201315673871 36.0 33.0 40.0 25.0 41.0 38 34.313694319978914 36.0 33.0 40.0 24.0 41.0 39 34.27512739413108 36.0 33.0 40.0 24.0 41.0 40 34.177432019855914 36.0 33.0 40.0 24.0 41.0 41 34.1748868827974 36.0 33.0 40.0 24.0 41.0 42 34.132067079599366 36.0 33.0 40.0 24.0 41.0 43 33.99517879107363 36.0 33.0 39.0 23.0 41.0 44 33.87400336056932 35.0 33.0 39.0 23.0 41.0 45 33.60534725882973 35.0 33.0 39.0 23.0 41.0 46 33.482667259708315 35.0 32.0 39.0 23.0 40.0 47 33.38581202776314 35.0 32.0 39.0 22.0 40.0 48 33.38663295115094 35.0 32.0 39.0 23.0 40.0 49 33.28444858109295 35.0 32.0 39.0 22.0 40.0 50 33.00230352749956 35.0 32.0 39.0 20.0 40.0 51 31.091797904586187 34.0 28.0 38.0 13.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 3.0 9 4.0 10 2.0 11 15.0 12 13.0 13 18.0 14 31.0 15 55.0 16 82.0 17 203.0 18 406.0 19 734.0 20 1112.0 21 1688.0 22 2269.0 23 2946.0 24 3599.0 25 4223.0 26 4961.0 27 5790.0 28 6854.0 29 8721.0 30 10818.0 31 13974.0 32 18043.0 33 24717.0 34 40691.0 35 41387.0 36 34730.0 37 44547.0 38 54425.0 39 37163.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 19.803747144614302 36.66781980319803 18.644295817958177 24.884137234229485 2 22.794489105605344 34.85602266736953 19.359240467404675 22.990247759620452 3 19.913569671411 31.030354946406607 23.87843744508874 25.177637937093657 4 21.92332191179055 33.714417501317875 18.20720216130733 26.155058425584254 5 16.814927077842206 37.62135389211035 19.295543401862588 26.268175628184853 6 20.10328808645229 37.01348620629064 21.385191530486733 21.49803417677034 7 76.72943024073098 10.869959146020031 7.124461869618696 5.276148743630293 8 78.82182393252504 6.664854594974521 5.521052978386927 8.992268494113514 9 74.3984471094711 10.017736338077667 9.64928176067475 5.934534791776489 10 44.54044763661923 27.420763046916186 12.485997627833422 15.55279168863117 11 37.8357823756809 24.031090757336145 20.8077995958531 17.325327271129854 12 34.76157529432437 23.513826656123705 26.099598049551926 15.625 13 25.940355385696712 33.625461254612546 21.268779652082234 19.165403707608505 14 17.345918994904235 33.90825426111404 29.86294148655772 18.882885257424004 15 15.53631830961167 28.405596555965563 34.09275610613249 21.965329028290284 16 17.844238710244245 25.53950316288877 34.788756369706554 21.827501757160427 17 17.523007819363908 27.125340449833068 27.28156299420137 28.07008873660165 18 23.366389913899138 26.05319803198032 26.22809040590406 24.35232164821648 19 23.85729660868037 30.40079731154454 25.316288877174486 20.425617202600595 20 27.474850641363556 30.061720260059744 21.93842250922509 20.52500658935161 21 21.30611931119311 31.40430065014936 23.14921586715867 24.140364171498856 22 20.44044324371815 30.396404410472677 24.455554823405375 24.707597522403795 23 22.846654805833772 30.305251713231417 21.511761992619927 25.336331488314883 24 19.42513398348269 30.897195132665612 27.086078896503253 22.591591987348444 25 20.76167413459849 27.857582147250042 25.35637409945528 26.024369618696184 26 22.862853628536286 31.682975311895976 22.85873528378141 22.595435775786328 27 20.189498769987697 29.00962045334739 25.744047619047617 25.05683315761729 28 22.852695044807593 29.201809875241608 27.237908539799683 20.707586540151116 29 20.06347742048849 29.312456070989278 29.469502284308557 21.154564224213672 30 26.580895273238447 26.612743806009487 23.717272887014584 23.089088033737482 31 27.72414777719206 31.114918292040063 20.77485283781409 20.386081092953788 32 28.36715867158672 24.94179406079775 24.962934897206114 21.72811237040942 33 28.64171498857846 26.5325733614479 21.252855385696716 23.57285626427693 34 21.806360920752066 28.923409769811986 26.02491873133017 23.245310578105784 35 27.806789228606572 25.17489237392374 25.724005007907223 21.294313389562465 36 25.525500790722194 28.735887805306625 27.2538328061852 18.48477859778598 37 25.438740994552806 30.14243981725532 22.7027872957301 21.716031892461782 38 24.607933579335793 30.656958355297835 23.17914250571077 21.555965559655597 39 22.886740028114566 27.858680372518013 26.050452468810402 23.20412713055702 40 26.31924310314532 26.456521261641186 21.621859075733614 25.60237655947988 41 21.40715603584607 25.4521942540854 26.921070549991217 26.219579160077316 42 29.171334124055527 24.712814092426637 20.973906167633103 25.14194561588473 43 23.880908451941664 24.540392725355826 25.715493762080477 25.863205060622036 44 22.76758258654015 25.035143208574944 24.526390353189246 27.67088385169566 45 26.19377086628009 27.332905025478826 23.370508258654016 23.102815849587067 46 20.96841504129327 25.476904322614658 30.46751449657354 23.08716613951854 47 23.145646635037778 26.774732033034613 23.709310753821825 26.370310578105784 48 23.115994552802672 21.657825953259533 31.61735635213495 23.608823141802844 49 24.25265770514848 20.83305877701634 28.849554120541203 26.064729397293974 50 19.811434721490073 25.708080741521698 25.192738534528203 29.287746002460025 51 20.774029168863116 24.118399666139517 29.15293885081708 25.954632314180287 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 2731.0 1 2206.5 2 1682.0 3 1187.0 4 692.0 5 689.5 6 687.0 7 719.5 8 752.0 9 811.0 10 870.0 11 901.5 12 933.0 13 957.5 14 982.0 15 1043.0 16 1104.0 17 1040.0 18 976.0 19 950.5 20 925.0 21 941.0 22 957.0 23 990.5 24 1024.0 25 1223.0 26 1789.0 27 2156.0 28 2232.0 29 2308.0 30 2781.5 31 3255.0 32 3822.5 33 4390.0 34 4861.0 35 5332.0 36 6419.0 37 7506.0 38 8136.5 39 8767.0 40 11698.5 41 14630.0 42 18325.5 43 22021.0 44 30569.5 45 39118.0 46 38106.0 47 37094.0 48 35801.0 49 34508.0 50 32284.5 51 30061.0 52 27650.0 53 25239.0 54 23359.5 55 21480.0 56 19794.0 57 18108.0 58 16682.0 59 15256.0 60 14709.5 61 14163.0 62 13190.0 63 12217.0 64 11286.5 65 10356.0 66 8522.0 67 6688.0 68 5299.0 69 3910.0 70 3442.5 71 2975.0 72 2679.5 73 2384.0 74 2111.0 75 1537.0 76 1236.0 77 909.5 78 583.0 79 545.0 80 507.0 81 345.0 82 183.0 83 147.5 84 112.0 85 79.5 86 47.0 87 33.5 88 20.0 89 18.0 90 16.0 91 13.0 92 10.0 93 8.5 94 7.0 95 6.0 96 5.0 97 3.0 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 364224.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 28.457898905033733 #Duplication Level Percentage of deduplicated Percentage of total 1 77.7352743035322 22.12182577484986 2 9.444640520557018 5.375492502567936 3 3.072491113596366 2.6230992449201973 4 1.463710093510052 1.6661645546954613 5 0.8753390360727682 1.2455154898094258 6 0.6078182738719504 1.0378338594288044 7 0.40421148133247153 0.8052106630409385 8 0.35031629614473664 0.797541259237822 9 0.29043313128345966 0.7438605019863378 >10 4.479257271993261 31.223962855586258 >50 1.1687188646299922 22.1323346858834 >100 0.09581298975617357 3.9933861927457603 >500 0.006986363836387656 1.4309160482968093 >1k 0.00499025988313404 4.802856366950982 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source AATGATACGGCTGTCTCTTATACACATCTGACGCGTGATCAGTCGTATGCC 4327 1.1880051836232648 No Hit AATCTGTCTCTTATACACATCTGACGCGTGATCAGTCGTATGCCGTCTTCT 3957 1.0864193463363205 No Hit AATGATACCTGTCTCTTATACACATCTGACGCGTGATCAGTCGTATGCCGT 3526 0.96808557371288 No Hit CTGTCTCTTATACACATCTGACGCGTGATCAGTCGTATGCCGTCTTCTGCT 2801 0.7690322438938675 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 2299 0.6312049727640133 No Hit AAACTGTCTCTTATACACATCTGACGCGTGATCAGTCGTATGCCGTCTTCT 998 0.2740072043577579 No Hit AATGACTGTCTCTTATACACATCTGACGCGTGATCAGTCGTATGCCGTCTT 892 0.24490423475663328 No Hit AAAAACTGTCTCTTATACACATCTGACGCGTGATCAGTCGTATGCCGTCTT 791 0.21717404674046742 No Hit AATGATCTGTCTCTTATACACATCTGACGCGTGATCAGTCGTATGCCGTCT 728 0.19987699876998768 No Hit AACTGTCTCTTATACACATCTGACGCGTGATCAGTCGTATGCCGTCTTCTG 579 0.15896810753821825 No Hit CAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 533 0.14633851695659814 No Hit ACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATACA 517 0.1419456158847303 No Hit AATGATACGGCGACTGTCTCTTATACACATCTGACGCGTGATCAGTCGTAT 444 0.12190300474433316 No Hit GAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 444 0.12190300474433316 No Hit AAAAAACTGTCTCTTATACACATCTGACGCGTGATCAGTCGTATGCCGTCT 430 0.11805921630644878 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 5.491126339834827E-4 0.0 0.0 1.085870233702337 0.0 2 5.491126339834827E-4 0.0 0.0 1.3678395712528555 0.0 3 5.491126339834827E-4 0.0 0.0 1.8570989281321384 0.0 4 5.491126339834827E-4 0.0 0.0 4.689971006852925 0.0 5 5.491126339834827E-4 0.0 0.0 5.04689421894219 0.0 6 5.491126339834827E-4 0.0 0.0 6.71043094359515 0.0 7 5.491126339834827E-4 0.0 0.0 8.007434985064137 0.0 8 5.491126339834827E-4 0.0 0.0 8.831653048673344 0.0 9 5.491126339834827E-4 0.0 0.0 10.974015990159902 0.0 10 5.491126339834827E-4 0.0 0.0 12.509060358460728 0.0 11 5.491126339834827E-4 0.0 0.0 15.419082762256194 0.0 12 5.491126339834827E-4 0.0 0.0 16.217217975751186 0.0 13 5.491126339834827E-4 0.0 0.0 16.62932700755579 0.0 14 5.491126339834827E-4 0.0 0.0 17.126273941310842 0.0 15 5.491126339834827E-4 0.0 0.0 17.414008961518185 0.0 16 5.491126339834827E-4 0.0 0.0 17.966141714988577 0.0 17 5.491126339834827E-4 0.0 0.0 18.544357318573187 0.0 18 5.491126339834827E-4 0.0 0.0 19.41113161131611 0.0 19 5.491126339834827E-4 0.0 0.0 19.738128184853277 0.0 20 5.491126339834827E-4 0.0 0.0 20.106308205939204 0.0 21 5.491126339834827E-4 0.0 0.0 20.468173431734318 0.0 22 5.491126339834827E-4 0.0 0.0 20.833607889650324 0.0 23 5.491126339834827E-4 0.0 0.0 21.190531101739587 0.0 24 5.491126339834827E-4 0.0 0.0 21.44449569495695 0.0 25 5.491126339834827E-4 0.0 0.0 21.673475663328063 0.0 26 5.491126339834827E-4 0.0 0.0 21.89394438587243 0.0 27 5.491126339834827E-4 0.0 0.0 22.140495958531012 0.0 28 5.491126339834827E-4 0.0 0.0 22.356571780003513 0.0 29 5.491126339834827E-4 0.0 0.0 22.585277192057635 0.0 30 5.491126339834827E-4 0.0 0.0 22.989424090669477 0.0 31 5.491126339834827E-4 0.0 0.0 23.23707388859603 0.0 32 5.491126339834827E-4 0.0 0.0 23.464955631699173 0.0 33 5.491126339834827E-4 0.0 0.0 23.706016078017925 0.0 34 5.491126339834827E-4 0.0 0.0 23.938565278509927 0.0 35 5.491126339834827E-4 0.0 0.0 24.21833816552451 0.0 36 5.491126339834827E-4 0.0 0.0 24.42919741697417 0.0 37 5.491126339834827E-4 0.0 0.0 24.669983306975926 0.0 38 5.491126339834827E-4 0.0 0.0 24.90555262695484 0.0 39 5.491126339834827E-4 0.0 0.0 25.16226278334212 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTATCGG 35 1.208864E-7 45.000004 2 GCTTGCG 35 1.208864E-7 45.000004 1 CCTTCGT 25 3.885541E-5 45.0 32 GTTTGAC 20 7.0269336E-4 45.0 29 AACCGTT 20 7.0269336E-4 45.0 16 TTAGGAT 25 3.885541E-5 45.0 39 TAATAGG 80 0.0 45.0 2 ACTATCG 25 3.885541E-5 45.0 1 GTACCTT 20 7.0269336E-4 45.0 7 AATCCGA 25 3.885541E-5 45.0 27 CTCACCG 20 7.0269336E-4 45.0 1 GCCCACG 20 7.0269336E-4 45.0 1 TACCCCC 20 7.0269336E-4 45.0 24 ACCGGGT 75 0.0 45.0 4 CTACTTG 20 7.0269336E-4 45.0 1 GTCGATA 20 7.0269336E-4 45.0 44 GGTAATC 25 3.885541E-5 45.0 8 GATCGCG 20 7.0269336E-4 45.0 9 ATAGGCG 20 7.0269336E-4 45.0 1 GTTTCGA 25 3.885541E-5 45.0 23 >>END_MODULE