##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3548675_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 303202 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.999812006517107 31.0 31.0 33.0 28.0 34.0 2 31.244744427807206 31.0 31.0 34.0 28.0 34.0 3 31.47699553433025 31.0 31.0 34.0 30.0 34.0 4 35.44262900640497 37.0 35.0 37.0 33.0 37.0 5 34.728534112571815 35.0 35.0 37.0 32.0 37.0 6 34.80324008416831 35.0 35.0 37.0 32.0 37.0 7 34.77805555372326 35.0 35.0 37.0 32.0 37.0 8 35.16782211199135 36.0 35.0 37.0 32.0 37.0 9 36.63209015771664 39.0 35.0 39.0 32.0 39.0 10 35.96037625081629 37.0 35.0 39.0 31.0 39.0 11 36.20074735654778 37.0 35.0 39.0 32.0 39.0 12 35.987269213263765 37.0 35.0 39.0 32.0 39.0 13 35.70015039478631 37.0 35.0 39.0 30.0 39.0 14 36.630447688339785 38.0 35.0 40.0 31.0 41.0 15 36.7158165183607 38.0 35.0 40.0 31.0 41.0 16 36.527315123251164 38.0 35.0 40.0 31.0 41.0 17 36.46878978370855 38.0 35.0 40.0 31.0 41.0 18 36.30907118026926 38.0 35.0 40.0 31.0 41.0 19 36.35691057446851 38.0 35.0 40.0 31.0 41.0 20 36.23416402266476 38.0 34.0 40.0 30.0 41.0 21 36.32152822210935 38.0 34.0 40.0 30.0 41.0 22 36.254975231034095 38.0 34.0 40.0 30.0 41.0 23 36.14637766241648 38.0 34.0 40.0 30.0 41.0 24 35.75186179510689 38.0 34.0 40.0 29.0 41.0 25 35.79335888285697 38.0 34.0 40.0 29.0 41.0 26 35.74229721439832 38.0 34.0 40.0 29.0 41.0 27 35.57532931840819 38.0 34.0 40.0 28.0 41.0 28 35.39626057875608 38.0 34.0 40.0 27.0 41.0 29 35.10253230519588 37.0 34.0 40.0 26.0 41.0 30 35.06936959518737 37.0 34.0 40.0 26.0 41.0 31 34.98027717495267 37.0 34.0 40.0 26.0 41.0 32 34.92272478413731 37.0 34.0 40.0 25.0 41.0 33 34.839948285301546 37.0 34.0 40.0 25.0 41.0 34 34.86478651196232 37.0 34.0 40.0 25.0 41.0 35 34.71993588432794 37.0 33.0 40.0 25.0 41.0 36 34.80724071740951 37.0 33.0 40.0 25.0 41.0 37 34.71960936933134 37.0 33.0 40.0 25.0 41.0 38 34.67952388176859 37.0 33.0 40.0 25.0 41.0 39 34.623894301488775 37.0 33.0 40.0 24.0 41.0 40 34.341465425689805 37.0 33.0 40.0 24.0 41.0 41 34.457671783167655 37.0 33.0 40.0 24.0 41.0 42 34.3669072103746 37.0 33.0 40.0 24.0 41.0 43 34.38470062862382 37.0 33.0 40.0 24.0 41.0 44 34.207630556526674 37.0 33.0 40.0 23.0 41.0 45 34.07675081298936 37.0 33.0 40.0 23.0 41.0 46 33.992836458862406 37.0 33.0 40.0 23.0 41.0 47 33.93006972249523 37.0 33.0 40.0 23.0 41.0 48 33.95678788398494 37.0 33.0 40.0 23.0 41.0 49 33.76472450709428 36.0 33.0 40.0 22.0 41.0 50 33.67983720424008 36.0 33.0 40.0 22.0 41.0 51 32.3357827454964 35.0 31.0 39.0 18.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 2.0 10 2.0 11 6.0 12 9.0 13 4.0 14 18.0 15 24.0 16 74.0 17 155.0 18 318.0 19 621.0 20 1133.0 21 1749.0 22 2363.0 23 2870.0 24 3172.0 25 3394.0 26 3637.0 27 4324.0 28 5098.0 29 6345.0 30 8278.0 31 10750.0 32 14144.0 33 19333.0 34 29583.0 35 32930.0 36 34783.0 37 45077.0 38 49135.0 39 23871.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 19.18753834077612 36.967434251752955 17.735700951840688 26.10932645563024 2 19.541098013865344 38.04889149807719 19.17467562878873 23.23533485926874 3 18.333322339562404 35.581229675265995 22.24952342003021 23.835924565141394 4 19.4569956662555 33.83486916313217 18.7868153903998 27.921319780212535 5 15.940198283652482 37.30021569778563 19.228764981761334 27.53082103680055 6 19.193145163950106 36.41367801003951 21.753814288823953 22.63936253718643 7 71.88244140869783 12.222214893041603 9.253896742105923 6.641446956154643 8 74.13110731459554 9.199807389133317 7.170797026404839 9.498288269866293 9 69.47546520141688 12.23870554943569 12.624257095929448 5.661572153217986 10 32.46119748550471 39.70818134445023 12.491672218520986 15.338948951524067 11 23.61824790073944 28.618544732554536 31.024531500451847 16.73867586625418 12 24.955640134299905 24.565141390887923 34.33123792059419 16.14798055421798 13 22.798002651697548 33.57893417589594 25.385056826801932 18.23800634560458 14 13.24595484198653 37.24249840040633 32.326963542456845 17.184583215150294 15 12.186265262102493 32.16502529666691 35.49152050448216 20.157188936748437 16 13.515082354338032 33.2309813259807 32.13567192828543 21.118264391395837 17 14.00089709170784 30.3009214978793 28.165711307972902 27.53247010243996 18 19.257128910759164 28.98661618327056 26.656156621658166 25.10009828431211 19 19.584303533617852 33.73460597225612 28.044669890040304 18.636420604085725 20 19.87519871240955 32.798596315327735 25.864275301614104 21.461929670648612 21 18.40225328328969 33.55848576196727 26.136371132116544 21.902889822626502 22 15.562892065355769 33.602680721103425 26.852395432747805 23.982031780793005 23 17.69876188151793 31.731321033502418 23.183884011319186 27.386033073660464 24 14.00716354113759 33.44898780351053 27.30786736235249 25.235981292999387 25 14.788161027961557 33.644896801472285 27.12218257135507 24.44475959921109 26 19.46985837824289 34.04693900436013 24.056899360822158 22.426303256574826 27 14.562898661618325 33.016272979729685 27.167696783002746 25.253131575649235 28 19.222828345459465 31.978021253157962 29.3091734223389 19.489976979043675 29 20.196436698966366 30.58785891913642 26.537753708748625 22.677950673148594 30 20.62123600767805 31.388645193633284 27.136364535853986 20.853754262834677 31 22.67894011253224 33.38599349608512 22.292069313526955 21.642997077855686 32 22.078350406659585 29.08457068225144 24.002810007849554 24.834268903239426 33 23.41937058462675 28.94176159787864 26.77950673148594 20.85936108600867 34 18.30825654184339 28.302583756043827 25.913747270796367 27.475412431316414 35 20.53383552878939 28.078970455340002 29.069069465240993 22.318124550629616 36 22.719507127261693 25.08162874915073 32.387649157987084 19.81121496560049 37 18.58068218547371 27.487945330175922 29.830607977519936 24.10076450683043 38 21.565161179675595 26.299298817290122 30.821036800548807 21.314503202485472 39 22.254140803820555 24.08955086048245 28.061490359562274 25.59481797613472 40 24.543043911319845 26.78511355465993 24.108020395643827 24.563822138376395 41 18.958318216898306 23.32471421692469 31.12215618630484 26.594811379872162 42 24.658478506078456 26.287425544686382 26.83854328137677 22.21555266785839 43 20.923015019689846 24.847791241482575 30.062796419548683 24.166397319278897 44 20.347820924664084 24.60076120869915 28.389984234932484 26.661433631704277 45 23.43058423097473 26.873833286060115 27.09975527865911 22.59582720430604 46 19.124544033350706 25.30062466606421 31.760014775628132 23.814816524956957 47 21.852098600932713 24.851748999017158 27.008067229107986 26.288085170942143 48 21.412127888338468 21.107380558175738 34.335525491256654 23.14496606222914 49 21.707310637792627 20.588584508017757 31.799262537846058 25.904842316343558 50 19.36069023291403 22.31350716683927 28.7329898879295 29.5928127123172 51 18.78714520352768 22.455326811828417 33.73526559851188 25.022262386132017 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 4903.0 1 3863.5 2 2824.0 3 1926.5 4 1029.0 5 1156.0 6 1283.0 7 1211.0 8 1139.0 9 1159.5 10 1180.0 11 1169.5 12 1159.0 13 1241.5 14 1324.0 15 1371.0 16 1418.0 17 1366.0 18 1314.0 19 1240.5 20 1167.0 21 1226.0 22 1285.0 23 1338.5 24 1392.0 25 1560.5 26 2183.0 27 2637.0 28 2759.0 29 2881.0 30 3106.5 31 3332.0 32 4237.0 33 5142.0 34 5749.0 35 6356.0 36 7123.5 37 7891.0 38 8604.0 39 9317.0 40 10950.0 41 12583.0 42 16336.5 43 20090.0 44 27043.5 45 33997.0 46 34328.5 47 34660.0 48 36300.5 49 37941.0 50 34865.5 51 31790.0 52 27402.5 53 23015.0 54 18944.0 55 14873.0 56 12612.5 57 10352.0 58 8997.0 59 7642.0 60 6501.0 61 5360.0 62 4696.5 63 4033.0 64 3282.5 65 2532.0 66 2016.0 67 1500.0 68 1078.5 69 657.0 70 640.0 71 623.0 72 491.0 73 359.0 74 247.5 75 138.0 76 140.0 77 112.0 78 84.0 79 83.0 80 82.0 81 53.0 82 24.0 83 18.5 84 13.0 85 9.0 86 5.0 87 6.5 88 8.0 89 4.0 90 0.0 91 0.5 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 303202.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 41.96250175645177 #Duplication Level Percentage of deduplicated Percentage of total 1 80.18173971560294 33.646263936513485 2 9.157302124762005 7.685266129893703 3 3.1453738787932584 3.959632707406789 4 1.5056470134724118 2.527228617897298 5 0.8799559710098532 1.8462576989550596 6 0.5997880775605565 1.5101164954880213 7 0.4446286211255302 1.3060410506464157 8 0.3729951135628666 1.2521446486423777 9 0.31082480896133213 1.173868793278982 >10 3.1223971833366813 27.6846765898141 >50 0.2281993595088531 6.17805233837916 >100 0.040131611499832784 3.5073902692818506 >500 0.004721366058803856 1.2996693748722807 >1k 0.006295154745071809 6.423391348930507 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 4255 1.4033548591368132 No Hit CTGTCTCTTATACACATCTGACGCAGTTCGCTTCGTATGCCGTCTTCTGCT 4141 1.3657561625582946 No Hit AATCTGTCTCTTATACACATCTGACGCAGTTCGCTTCGTATGCCGTCTTCT 2497 0.8235433803207104 No Hit AATGATACGGCTGTCTCTTATACACATCTGACGCAGTTCGCTTCGTATGCC 2491 0.8215645015534198 No Hit AATGATACCTGTCTCTTATACACATCTGACGCAGTTCGCTTCGTATGCCGT 2319 0.7648366435577602 No Hit AAACTGTCTCTTATACACATCTGACGCAGTTCGCTTCGTATGCCGTCTTCT 1617 0.5333078277847771 No Hit AAAAACTGTCTCTTATACACATCTGACGCAGTTCGCTTCGTATGCCGTCTT 1117 0.36840126384390603 No Hit CAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1016 0.3350901379278501 No Hit GAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 789 0.26022255789869464 No Hit CCTGTCTCTTATACACATCTGACGCAGTTCGCTTCGTATGCCGTCTTCTGC 678 0.2236133007038212 No Hit AATGACTGTCTCTTATACACATCTGACGCAGTTCGCTTCGTATGCCGTCTT 674 0.22229404819229426 No Hit AAAAAACTGTCTCTTATACACATCTGACGCAGTTCGCTTCGTATGCCGTCT 645 0.21272946748372373 No Hit AACTGTCTCTTATACACATCTGACGCAGTTCGCTTCGTATGCCGTCTTCTG 631 0.20811208369337933 No Hit AATGATCTGTCTCTTATACACATCTGACGCAGTTCGCTTCGTATGCCGTCT 519 0.1711730133706242 No Hit TAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 492 0.16226805891781715 No Hit GGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 451 0.14874572067466574 No Hit AATGCTGTCTCTTATACACATCTGACGCAGTTCGCTTCGTATGCCGTCTTC 414 0.13654263494304125 No Hit AATGATACGGCGACTGTCTCTTATACACATCTGACGCAGTTCGCTTCGTAT 375 0.12367992295565333 No Hit GAAAAACTGTCTCTTATACACATCTGACGCAGTTCGCTTCGTATGCCGTCT 361 0.11906253916530894 No Hit GCTGTCTCTTATACACATCTGACGCAGTTCGCTTCGTATGCCGTCTTCTGC 359 0.11840291290954544 No Hit AACCTGTCTCTTATACACATCTGACGCAGTTCGCTTCGTATGCCGTCTTCT 317 0.10455076153851228 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 3.2981312788174223E-4 0.0 0.0 1.5999234833543314 0.0 2 3.2981312788174223E-4 0.0 0.0 2.187650477239596 0.0 3 3.2981312788174223E-4 0.0 0.0 2.9214846867764726 0.0 4 3.2981312788174223E-4 0.0 0.0 6.512160210025 0.0 5 6.596262557634845E-4 0.0 0.0 7.177393288962474 0.0 6 6.596262557634845E-4 0.0 0.0 9.935620477437483 0.0 7 6.596262557634845E-4 0.0 0.0 12.050712066543097 0.0 8 6.596262557634845E-4 0.0 0.0 13.435597390518533 0.0 9 6.596262557634845E-4 0.0 0.0 15.901610147690318 0.0 10 6.596262557634845E-4 0.0 0.0 18.51999656994347 0.0 11 6.596262557634845E-4 0.0 0.0 21.73237643551164 0.0 12 6.596262557634845E-4 0.0 0.0 23.25281495504647 0.0 13 6.596262557634845E-4 0.0 0.0 23.94509271047025 0.0 14 6.596262557634845E-4 0.0 0.0 24.654850561671758 0.0 15 6.596262557634845E-4 0.0 0.0 25.142644177808855 0.0 16 6.596262557634845E-4 0.0 0.0 26.06216317834315 0.0 17 6.596262557634845E-4 0.0 0.0 27.19012407569871 0.0 18 6.596262557634845E-4 0.0 0.0 29.032790021174 0.0 19 6.596262557634845E-4 0.0 0.0 29.669329357985767 0.0 20 6.596262557634845E-4 0.0 0.0 30.477701334423916 0.0 21 6.596262557634845E-4 0.0 0.0 31.105665529910752 0.0 22 6.596262557634845E-4 0.0 0.0 31.776175618894335 0.0 23 6.596262557634845E-4 0.0 0.0 32.43778075342511 0.0 24 6.596262557634845E-4 0.0 0.0 32.85829249147433 0.0 25 6.596262557634845E-4 0.0 0.0 33.23922665417774 0.0 26 6.596262557634845E-4 0.0 0.0 33.57794473651229 0.0 27 6.596262557634845E-4 0.0 0.0 34.078930877764655 0.0 28 6.596262557634845E-4 0.0 0.0 34.52714691855595 0.0 29 6.596262557634845E-4 0.0 0.0 34.91599659632852 0.0 30 6.596262557634845E-4 0.0 0.0 35.57199490768531 0.0 31 6.596262557634845E-4 0.0 0.0 35.99580477701335 0.0 32 6.596262557634845E-4 0.0 0.0 36.350353889486215 0.0 33 6.596262557634845E-4 0.0 0.0 36.73491599659633 0.0 34 6.596262557634845E-4 0.0 0.0 37.13695819948417 0.0 35 6.596262557634845E-4 0.0 0.0 37.53405320545379 0.0 36 6.596262557634845E-4 0.0 0.0 37.890911009821835 0.0 37 6.596262557634845E-4 0.0 0.0 38.25700358177057 0.0 38 6.596262557634845E-4 0.0 0.0 38.60957381547615 0.0 39 6.596262557634845E-4 0.0 0.0 38.98786947315651 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTATGTA 20 7.0250634E-4 45.0 45 CGTGGGA 40 6.7866495E-9 45.0 4 CGAACAG 20 7.0250634E-4 45.0 1 GATCGTG 20 7.0250634E-4 45.0 29 AGGAGTA 20 7.0250634E-4 45.0 35 CTATCGG 20 7.0250634E-4 45.0 2 GCAACTC 20 7.0250634E-4 45.0 21 TTCACGG 40 6.7866495E-9 45.0 2 CAACCCG 40 6.7866495E-9 45.0 1 CCTACCG 20 7.0250634E-4 45.0 1 TATGCTC 20 7.0250634E-4 45.0 24 TCGATTG 20 7.0250634E-4 45.0 1 ACGGGTG 20 7.0250634E-4 45.0 5 CGTTCCG 20 7.0250634E-4 45.0 1 CCGTCAA 20 7.0250634E-4 45.0 13 ATCGTGA 20 7.0250634E-4 45.0 30 TAGCACG 20 7.0250634E-4 45.0 1 GTTACGG 20 7.0250634E-4 45.0 2 GGCCAAT 20 7.0250634E-4 45.0 22 TCGTGAG 20 7.0250634E-4 45.0 31 >>END_MODULE