##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3548653_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 423287 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.229662144124436 31.0 31.0 33.0 30.0 34.0 2 31.48690604719729 31.0 31.0 34.0 30.0 34.0 3 31.653679418456036 31.0 31.0 34.0 30.0 34.0 4 35.56368846669045 37.0 35.0 37.0 33.0 37.0 5 34.92819292820238 35.0 35.0 37.0 32.0 37.0 6 35.00221835303234 35.0 35.0 37.0 32.0 37.0 7 34.97931190894121 36.0 35.0 37.0 32.0 37.0 8 35.342604426783716 37.0 35.0 37.0 33.0 37.0 9 36.88435505933327 39.0 37.0 39.0 33.0 39.0 10 36.27610817246927 38.0 35.0 39.0 32.0 39.0 11 36.46590374852051 38.0 35.0 39.0 32.0 39.0 12 36.18585262481484 37.0 35.0 39.0 32.0 39.0 13 35.971000763075644 37.0 35.0 39.0 31.0 39.0 14 36.95563766427979 39.0 35.0 40.0 32.0 41.0 15 37.00893483617498 38.0 35.0 40.0 32.0 41.0 16 36.84218508954917 38.0 35.0 40.0 32.0 41.0 17 36.79366718089618 38.0 35.0 40.0 32.0 41.0 18 36.637345347246665 38.0 35.0 40.0 31.0 41.0 19 36.7703236810958 38.0 35.0 40.0 31.0 41.0 20 36.645845490175695 38.0 35.0 40.0 31.0 41.0 21 36.777616605282 38.0 35.0 40.0 31.0 41.0 22 36.731461159922226 38.0 35.0 40.0 31.0 41.0 23 36.6334283831065 38.0 35.0 40.0 31.0 41.0 24 36.22170773021614 38.0 35.0 40.0 30.0 41.0 25 36.40293465190285 38.0 35.0 40.0 31.0 41.0 26 36.29855629868151 38.0 35.0 40.0 30.0 41.0 27 36.16750573487965 38.0 35.0 40.0 30.0 41.0 28 36.102301747986594 38.0 35.0 40.0 30.0 41.0 29 35.73464103551491 38.0 34.0 40.0 29.0 41.0 30 35.83195326102621 38.0 34.0 40.0 29.0 41.0 31 35.664622348430264 38.0 34.0 40.0 29.0 41.0 32 35.71642880598743 38.0 34.0 40.0 29.0 41.0 33 35.64598723797329 38.0 34.0 40.0 29.0 41.0 34 35.516611660646326 38.0 34.0 40.0 28.0 41.0 35 35.54685355326291 38.0 34.0 40.0 28.0 41.0 36 35.470529451648645 38.0 34.0 40.0 28.0 41.0 37 35.35958581293543 38.0 34.0 40.0 27.0 41.0 38 35.26531644014581 38.0 34.0 40.0 27.0 41.0 39 35.16137514263372 38.0 34.0 40.0 27.0 41.0 40 34.935183457087035 37.0 34.0 40.0 26.0 41.0 41 34.9439505583682 37.0 34.0 40.0 26.0 41.0 42 34.97542801928715 37.0 34.0 40.0 26.0 41.0 43 34.96375981308191 37.0 34.0 40.0 26.0 41.0 44 34.87443507596501 37.0 34.0 40.0 26.0 41.0 45 34.7027666807627 37.0 33.0 40.0 25.0 41.0 46 34.569516663634836 37.0 33.0 40.0 25.0 41.0 47 34.50873520802671 37.0 33.0 40.0 25.0 41.0 48 34.49671026986418 37.0 33.0 40.0 25.0 41.0 49 34.34767427301098 37.0 33.0 40.0 24.0 41.0 50 34.21284140547666 37.0 33.0 40.0 24.0 41.0 51 32.93825938429482 35.0 31.0 39.0 20.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 2.0 9 2.0 10 5.0 11 9.0 12 12.0 13 14.0 14 28.0 15 35.0 16 77.0 17 169.0 18 334.0 19 694.0 20 1168.0 21 1764.0 22 2363.0 23 2847.0 24 3465.0 25 3739.0 26 4192.0 27 5080.0 28 5974.0 29 7677.0 30 10078.0 31 13265.0 32 17994.0 33 25052.0 34 39512.0 35 42987.0 36 47996.0 37 63720.0 38 76989.0 39 46040.0 40 3.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 20.424440155261088 36.14946832763586 18.2694011391798 25.15669037792325 2 23.13702050854385 36.153012022575695 18.029138622258657 22.680828846621797 3 20.222449543690217 31.287991362834198 23.557775221067505 24.931783872408083 4 22.686735004854864 31.351541625421998 18.61172207036833 27.35000129935481 5 17.15290098680092 36.070798299971415 19.165955958959287 27.61034475426838 6 20.01124532527576 35.84754551876151 22.763515061884725 21.377694094078013 7 74.83504100055045 10.80283590093719 8.256100470838934 6.106022627673423 8 75.76632403074038 7.398526295397685 7.067072695357996 9.768076978503947 9 71.82904270624894 10.156938436569042 11.53000210259233 6.4840167545896765 10 34.00765910599664 34.510391294795255 14.696884147162564 16.78506545204554 11 27.90730639022696 28.683611828381217 25.781561918981684 17.62751986241014 12 27.699409620423022 24.400938370420068 31.955859735829357 15.943792273327553 13 24.700971208659844 31.58566173778075 24.351562887591633 19.361804165967772 14 16.05648177241446 34.50991880213661 30.474359004646967 18.95924042080196 15 15.067554637869815 29.907131567943264 32.82926241533522 22.1960513788517 16 16.688913196011217 30.568621290046703 32.12642958560031 20.616035928341763 17 17.24716327220066 26.982638257258078 28.085908615194892 27.68428985534637 18 21.07529879254501 26.862625121962168 27.685943579651628 24.37613250584119 19 22.202902522402056 30.60996439767817 27.70342580802151 19.48370727189826 20 23.047010657071915 30.50318105682433 24.80799079584301 21.641817490260745 21 20.062510778738776 30.01863983538356 27.81139038052196 22.107459005355704 22 18.34476371823373 31.11624028141663 25.955439217363157 24.583556782986484 23 20.020695178448662 30.94307172202312 22.763278815555406 26.272954283972812 24 16.582129855157376 32.171080141842296 27.13123719840203 24.1155528045983 25 18.078041612428446 29.037745076035883 27.57963273145643 25.30458058007924 26 20.6904535220784 31.39217599406549 24.75554411073338 23.161826373122725 27 17.337645616331237 29.374159848991344 27.780914604039342 25.507279930638077 28 19.343613198609926 28.21608034265168 30.6269741333894 21.813332325348995 29 20.00510292071337 29.740341659441466 29.856338607138895 20.39821681270627 30 20.970641668655073 27.034139957050417 28.91678695542268 23.07843141887183 31 22.75052151377198 30.68981565698923 23.27687833550286 23.282784493735928 32 25.365768379373804 26.69370899649647 25.586422450961166 22.354100173168558 33 22.004691852100347 25.35182984594377 27.083987932537497 25.559490369418388 34 20.208511010260178 27.775717184794242 28.4405143555082 23.575257449437377 35 21.739623470600325 25.59374608717017 30.090458719497647 22.576171722731857 36 21.7497820627612 26.432656802594927 30.98134362737339 20.83621750727048 37 21.844516840819587 28.543281508763556 26.098132000274042 23.51406965014281 38 22.80556690850416 26.93822394734542 25.33954503681899 24.91666410733143 39 23.96742635611299 24.955880997998996 26.319258564520055 24.75743408136796 40 24.721524639310914 26.32587346174109 24.437084058806434 24.51551784014156 41 20.10834256662737 25.238195361539574 28.96120126533534 25.692260806497718 42 26.95334371242207 24.174141894270317 26.433838034241543 22.438676359066072 43 21.592678253761633 24.96651208281851 28.521783092795193 24.91902657062466 44 21.79325138735657 23.76378202023686 27.457020886537975 26.9859457058686 45 25.100227505215138 26.08088601823349 25.723209075638987 23.095677400912386 46 20.778809649245076 25.567050251956708 30.721236418789143 22.932903680009073 47 21.3942313371306 25.455305738187096 25.87747792868668 27.272984995995625 48 21.20925046127096 24.252103182946794 32.49213890339179 22.04650745239046 49 24.061216148854086 21.532435439784354 29.732545530573816 24.67380288078774 50 19.725859759453986 24.39833966079752 27.876358121085694 27.9994424586628 51 20.186303855303848 23.29010812994493 31.43611781131951 25.087470203431717 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 4480.0 1 3620.0 2 2760.0 3 1830.0 4 900.0 5 1139.0 6 1378.0 7 1246.5 8 1115.0 9 1082.5 10 1050.0 11 1109.5 12 1169.0 13 1142.5 14 1116.0 15 1137.0 16 1158.0 17 1171.0 18 1184.0 19 1193.5 20 1203.0 21 1187.5 22 1172.0 23 1476.5 24 1781.0 25 2188.0 26 3098.5 27 3602.0 28 4143.0 29 4684.0 30 5265.0 31 5846.0 32 6741.5 33 7637.0 34 8663.0 35 9689.0 36 10586.0 37 11483.0 38 12370.5 39 13258.0 40 14257.0 41 15256.0 42 19534.0 43 23812.0 44 33236.5 45 42661.0 46 44642.0 47 46623.0 48 46827.5 49 47032.0 50 43272.5 51 39513.0 52 35081.5 53 30650.0 54 27416.0 55 24182.0 56 20703.5 57 17225.0 58 15687.0 59 14149.0 60 13319.5 61 12490.0 62 11220.5 63 9951.0 64 8070.0 65 6189.0 66 5137.5 67 4086.0 68 3533.0 69 2980.0 70 2616.0 71 2252.0 72 1881.5 73 1511.0 74 1400.5 75 1286.5 76 1283.0 77 867.0 78 451.0 79 342.5 80 234.0 81 165.5 82 97.0 83 79.5 84 62.0 85 45.5 86 29.0 87 20.0 88 11.0 89 7.0 90 3.0 91 2.5 92 2.0 93 1.0 94 0.0 95 0.5 96 1.0 97 1.5 98 2.0 99 1.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 423287.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 33.669893664158415 #Duplication Level Percentage of deduplicated Percentage of total 1 79.29573881276983 26.69879093846839 2 8.854034555019998 5.962288039326149 3 3.0745990610644958 3.1056427033788854 4 1.4976736475673973 2.017060498288261 5 0.8878924287632176 1.494762183083444 6 0.6306309071337713 1.2739965350715503 7 0.4367679838332913 1.0294152100103044 8 0.3710764221078548 0.9995282938918265 9 0.3203247551381663 0.9706770399149676 >10 3.871001692705284 30.778394947712645 >50 0.6800100953187855 14.88183990543365 >100 0.06828258721109959 3.713112441207294 >500 0.007743386178578304 2.001610785522507 >1k 0.0042236651883154385 5.072880478690139 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source AATGATACGGCTGTCTCTTATACACATCTGACGCTTTCGCAGTCGTATGCC 4271 1.009008072537073 No Hit AATCTGTCTCTTATACACATCTGACGCTTTCGCAGTCGTATGCCGTCTTCT 4188 0.9893996272032922 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 4010 0.9473477805838592 No Hit CTGTCTCTTATACACATCTGACGCTTTCGCAGTCGTATGCCGTCTTCTGCT 3941 0.9310467838605958 No Hit AATGATACCTGTCTCTTATACACATCTGACGCTTTCGCAGTCGTATGCCGT 3688 0.8712764625419632 No Hit AAACTGTCTCTTATACACATCTGACGCTTTCGCAGTCGTATGCCGTCTTCT 1305 0.3083014597660689 No Hit CAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 946 0.22348902753923464 No Hit AATGATCTGTCTCTTATACACATCTGACGCTTTCGCAGTCGTATGCCGTCT 887 0.2095504941091978 No Hit AATGACTGTCTCTTATACACATCTGACGCTTTCGCAGTCGTATGCCGTCTT 885 0.20907800145055247 No Hit AACTGTCTCTTATACACATCTGACGCTTTCGCAGTCGTATGCCGTCTTCTG 879 0.20766052347461653 No Hit AATGCTGTCTCTTATACACATCTGACGCTTTCGCAGTCGTATGCCGTCTTC 877 0.2071880308159712 No Hit AAAAACTGTCTCTTATACACATCTGACGCTTTCGCAGTCGTATGCCGTCTT 815 0.1925407583979664 No Hit GAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 785 0.18545336851828664 No Hit CCTGTCTCTTATACACATCTGACGCTTTCGCAGTCGTATGCCGTCTTCTGC 670 0.15828504064618096 No Hit AATGATACGGCGACTGTCTCTTATACACATCTGACGCTTTCGCAGTCGTAT 633 0.1495439264612426 No Hit GGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 563 0.13300668340865654 No Hit AATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCTTTCGCAGTC 505 0.11930439630794237 No Hit AAAAAACTGTCTCTTATACACATCTGACGCTTTCGCAGTCGTATGCCGTCT 449 0.10607460186587352 No Hit TGCAAAGGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGG 433 0.10229466059671098 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 1.101616633631555 0.0 2 0.0 0.0 0.0 1.5136302319702708 0.0 3 0.0 0.0 0.0 2.161417666972999 0.0 4 0.0 0.0 0.0 5.028739365962101 0.0 5 2.3624632932265816E-4 0.0 0.0 5.611086567742453 0.0 6 2.3624632932265816E-4 0.0 0.0 7.430183303526921 0.0 7 2.3624632932265816E-4 0.0 0.0 8.894910545327402 0.0 8 2.3624632932265816E-4 0.0 0.0 9.892342547727665 0.0 9 2.3624632932265816E-4 0.0 0.0 11.962332885252795 0.0 10 2.3624632932265816E-4 0.0 0.0 13.844743637295736 0.0 11 2.3624632932265816E-4 0.0 0.0 16.676155894227794 0.0 12 2.3624632932265816E-4 0.0 0.0 17.713749772612907 0.0 13 2.3624632932265816E-4 0.0 0.0 18.289245830842905 0.0 14 2.3624632932265816E-4 0.0 0.0 18.89143772428636 0.0 15 2.3624632932265816E-4 0.0 0.0 19.25691079574851 0.0 16 2.3624632932265816E-4 0.0 0.0 19.96872098599768 0.0 17 2.3624632932265816E-4 0.0 0.0 20.696359680311467 0.0 18 2.3624632932265816E-4 0.0 0.0 22.039892555169423 0.0 19 2.3624632932265816E-4 0.0 0.0 22.4859256249306 0.0 20 2.3624632932265816E-4 0.0 0.0 22.96739564409018 0.0 21 2.3624632932265816E-4 0.0 0.0 23.437998332100914 0.0 22 2.3624632932265816E-4 0.0 0.0 23.89891492060942 0.0 23 2.3624632932265816E-4 0.0 0.0 24.33620687618566 0.0 24 2.3624632932265816E-4 0.0 0.0 24.67994528535013 0.0 25 2.3624632932265816E-4 0.0 0.0 24.978560645613967 0.0 26 2.3624632932265816E-4 0.0 0.0 25.25780380687335 0.0 27 2.3624632932265816E-4 0.0 0.0 25.577445090446908 0.0 28 2.3624632932265816E-4 0.0 0.0 25.920238514294084 0.0 29 2.3624632932265816E-4 0.0 0.0 26.201135399858725 0.0 30 2.3624632932265816E-4 0.0 0.0 26.650948410889065 0.0 31 2.3624632932265816E-4 0.0 0.0 26.94200388861458 0.0 32 2.3624632932265816E-4 0.0 0.0 27.25762898458965 0.0 33 2.3624632932265816E-4 0.0 0.0 27.565930444355722 0.0 34 4.724926586453163E-4 0.0 0.0 27.886989205905213 0.0 35 4.724926586453163E-4 0.0 0.0 28.228128905447132 0.0 36 4.724926586453163E-4 0.0 0.0 28.480912477822375 0.0 37 4.724926586453163E-4 0.0 0.0 28.7407834400773 0.0 38 4.724926586453163E-4 0.0 0.0 29.0233340499472 0.0 39 4.724926586453163E-4 0.0 0.0 29.347464013777884 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTATCCG 30 2.16224E-6 45.000004 1 TAGACGG 25 3.8866146E-5 45.000004 2 TTGTCGC 30 2.16224E-6 45.000004 38 GGTTTCG 30 2.16224E-6 45.000004 8 ACGGGTA 30 2.16224E-6 45.000004 5 CCTCGAC 25 3.8866146E-5 45.000004 30 TAGCACG 30 2.16224E-6 45.000004 1 CCCGTTC 25 3.8866146E-5 45.000004 16 ACGATAA 25 3.8866146E-5 45.000004 34 ATATCCG 25 3.8866146E-5 45.000004 1 CCGTAGT 25 3.8866146E-5 45.000004 27 TACGATA 25 3.8866146E-5 45.000004 33 TCGCTCG 30 2.16224E-6 45.000004 21 GCGGGTC 30 2.16224E-6 45.000004 5 TGCCTAG 30 2.16224E-6 45.000004 1 TCCCGCG 30 2.16224E-6 45.000004 15 CTCGACT 25 3.8866146E-5 45.000004 31 TACTACG 30 2.16224E-6 45.000004 1 TTTGCGG 35 1.2095006E-7 45.000004 2 CGAGACG 25 3.8866146E-5 45.000004 1 >>END_MODULE