##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3548630_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 263964 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.860962100892547 31.0 30.0 33.0 28.0 34.0 2 31.020665696837447 31.0 31.0 34.0 28.0 34.0 3 31.09227773484263 31.0 31.0 34.0 28.0 34.0 4 34.95265263445015 35.0 35.0 37.0 32.0 37.0 5 34.40470670242912 35.0 35.0 37.0 30.0 37.0 6 34.434945674410145 35.0 35.0 37.0 30.0 37.0 7 33.27926914276189 35.0 33.0 37.0 28.0 37.0 8 33.98229303995999 35.0 35.0 37.0 29.0 37.0 9 35.55607961691746 37.0 35.0 39.0 31.0 39.0 10 35.32255156006122 37.0 34.0 39.0 30.0 39.0 11 35.75886484520616 37.0 35.0 39.0 30.0 39.0 12 34.943090724492734 37.0 33.0 39.0 29.0 39.0 13 35.33189374308618 37.0 34.0 39.0 30.0 39.0 14 36.14485687442227 38.0 34.0 40.0 30.0 41.0 15 36.41290100165174 38.0 35.0 40.0 31.0 41.0 16 36.115436195844886 38.0 34.0 40.0 30.0 41.0 17 35.967389492506555 38.0 34.0 40.0 30.0 41.0 18 35.5049021836311 37.0 34.0 40.0 27.0 41.0 19 35.32680213968572 37.0 33.0 40.0 27.0 41.0 20 35.81293661256838 37.0 34.0 40.0 30.0 41.0 21 36.25945583488657 38.0 34.0 40.0 31.0 41.0 22 36.22167795608492 38.0 34.0 40.0 30.0 41.0 23 36.262475186010214 38.0 35.0 40.0 31.0 41.0 24 35.91328741798124 38.0 34.0 40.0 30.0 41.0 25 35.77628009880135 37.0 34.0 40.0 29.0 41.0 26 35.81993756724402 38.0 34.0 40.0 30.0 41.0 27 35.5542270915731 38.0 34.0 40.0 29.0 41.0 28 35.58720886181449 38.0 34.0 40.0 29.0 41.0 29 35.348990771468834 37.0 34.0 40.0 27.0 41.0 30 35.35154793835523 37.0 34.0 40.0 27.0 41.0 31 35.31980876180085 37.0 34.0 40.0 28.0 41.0 32 34.4205194647755 37.0 33.0 40.0 25.0 41.0 33 34.87325923231956 37.0 33.0 40.0 26.0 41.0 34 34.863564728523585 37.0 33.0 40.0 26.0 41.0 35 34.790823748693 37.0 33.0 40.0 25.0 41.0 36 35.06786531496719 37.0 34.0 40.0 27.0 41.0 37 34.4240843448349 37.0 33.0 40.0 24.0 41.0 38 34.67474352563228 37.0 33.0 40.0 25.0 41.0 39 33.955111303056476 37.0 33.0 40.0 23.0 40.0 40 33.74596157051719 36.0 32.0 39.0 23.0 40.0 41 34.324752617781215 37.0 33.0 40.0 24.0 40.0 42 34.38407888954554 37.0 33.0 40.0 24.0 40.0 43 34.58311360640087 37.0 33.0 40.0 25.0 40.0 44 34.48474413177554 37.0 33.0 40.0 24.0 40.0 45 34.0800450061372 37.0 33.0 40.0 23.0 40.0 46 33.655415132366535 36.0 32.0 39.0 23.0 40.0 47 33.674398781652044 36.0 32.0 39.0 23.0 40.0 48 33.565327090057735 36.0 32.0 39.0 22.0 40.0 49 33.48189147004894 36.0 32.0 39.0 21.0 40.0 50 33.38137018684366 36.0 32.0 39.0 21.0 40.0 51 30.54406661514449 34.0 26.0 38.0 11.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 2.0 10 8.0 11 1.0 12 5.0 13 3.0 14 9.0 15 30.0 16 51.0 17 100.0 18 241.0 19 421.0 20 672.0 21 1098.0 22 1499.0 23 1982.0 24 2346.0 25 2858.0 26 3410.0 27 4150.0 28 5446.0 29 7236.0 30 9218.0 31 12219.0 32 16208.0 33 20573.0 34 28158.0 35 29447.0 36 30294.0 37 34214.0 38 34781.0 39 17283.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 14.647073085723811 52.34804746101741 14.026533921292298 18.978345531966482 2 17.74598051249413 52.02868572987226 14.52584443333182 15.6994893243018 3 16.074919307178252 23.04177842433059 41.146898819536 19.736403448955162 4 33.21248352048006 24.38665878680426 16.40640390356261 25.994453789153066 5 14.00607658620115 43.922277280235186 21.17561485657135 20.896031276992318 6 21.217666045369825 27.502992832355925 34.939991817065966 16.339349305208287 7 54.696852601112276 23.88204452122259 13.61511418223697 7.805988695428165 8 58.0567804700641 6.055371186980043 8.893637011107575 26.994211331848284 9 62.3641860253671 8.851585822309103 16.758724674576836 12.025503477746966 10 35.80753436074616 25.120092133775817 18.96546498764983 20.106908517828188 11 28.795972178024275 19.680714036762588 29.09866496946553 22.424648815747602 12 23.625191313967058 21.648785440438846 40.64834598657392 14.077677259020168 13 23.13383643224076 33.84438787107333 20.591444287857435 22.430331408828476 14 13.303708081405041 28.53570941492022 43.07784394841721 15.082738555257535 15 11.480353381521722 32.16991710990892 24.84164507281296 31.508084435756388 16 14.145489536451942 27.390098649815886 35.59500537952145 22.869406434210727 17 13.493127850767529 30.30981497476929 28.28491764028428 27.912139534178905 18 16.168871512782047 29.96090375960358 25.09357336606507 28.776651361549305 19 16.989437953660346 32.55557576033095 33.42804321801458 17.02694306799412 20 19.607976845327393 37.273643375611826 25.22995560000606 17.888424179054716 21 15.10736312527466 26.647573153914927 27.877286296616205 30.36777742419421 22 17.770226242972527 34.41075298146717 27.74734433483354 20.071676440726765 23 24.33627312815384 25.855040838902276 18.80635238138534 31.002333651558544 24 13.835977633313634 42.98502826142958 22.57201739631162 20.60697670894516 25 16.854571077874255 23.13383643224076 26.656665302844328 33.35492718704066 26 27.30751163037384 31.60658271582489 16.024912488066555 25.060993165734725 27 13.959858162476701 27.475337546029007 29.99272628085648 28.572078010637814 28 24.695034171326395 22.332969647376157 19.8993044506069 33.07269173069055 29 24.562819172311375 33.01927535573033 24.276795320574017 18.14111015138428 30 24.390826021730234 32.000196996560135 18.429785879892712 25.179191101816915 31 36.4405752299556 29.557060811322756 14.937264172387144 19.0650997863345 32 20.786925489839522 33.04958251882832 18.355912169841343 27.80757982149081 33 25.98460396114622 31.96079768453274 17.21636283735661 24.838235516964435 34 23.31567941082875 23.785440438847722 18.737403585337393 34.16147656498613 35 16.1029534330439 30.566289342486098 28.67739540240336 24.653361822066646 36 30.693579427497692 23.073979785122216 27.30448091406404 18.92795987331606 37 17.693700656150078 35.89731933142398 19.34278916821991 27.066190844206027 38 30.976193723386526 29.68738161264415 22.298874088890912 17.03755057507842 39 17.942219393553664 29.2740676758952 26.545286478459186 26.23842645209195 40 19.652301071358217 35.115015683956905 25.255337849100634 19.977345395584244 41 18.36500431877074 19.187843796881392 35.03470170174721 27.412450182600658 42 26.55096907154006 20.874437423284995 25.993317270536892 26.581276234638057 43 23.521389280356413 20.687290691154857 28.167856222818262 27.62346380567047 44 19.538270370201996 19.818232789319758 25.986876998378566 34.65661984209968 45 32.46503311057569 26.892682335469985 21.379809367944112 19.262475186010214 46 16.12606264490612 20.14820202754921 42.11975875498174 21.605976572562927 47 23.178160658271583 26.54793835523026 20.616447697413285 29.657453289084874 48 17.62134230425361 17.92782349108212 40.36307981391402 24.087754390750256 49 23.739222015123275 17.94562894940219 32.31955872770529 25.99559030776924 50 21.285478322801595 20.134184964616388 23.342577018078224 35.237759694503794 51 16.26964283008289 19.235956418299466 38.30976951402464 26.184631237593003 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1785.0 1 1431.0 2 1077.0 3 767.5 4 458.0 5 440.0 6 422.0 7 474.0 8 526.0 9 570.5 10 615.0 11 644.5 12 674.0 13 729.0 14 784.0 15 752.5 16 721.0 17 705.5 18 690.0 19 628.5 20 567.0 21 578.0 22 589.0 23 611.0 24 633.0 25 815.0 26 1259.0 27 1521.0 28 1866.5 29 2212.0 30 2521.0 31 2830.0 32 3034.0 33 3238.0 34 3622.5 35 4007.0 36 4642.5 37 5278.0 38 5817.5 39 6357.0 40 6967.0 41 7577.0 42 10525.0 43 13473.0 44 35095.0 45 56717.0 46 50583.5 47 44450.0 48 34784.0 49 25118.0 50 21162.0 51 17206.0 52 15350.0 53 13494.0 54 12403.5 55 11313.0 56 10032.5 57 8752.0 58 7910.5 59 7069.0 60 6484.0 61 5899.0 62 5321.5 63 4744.0 64 4089.5 65 3435.0 66 2996.0 67 2557.0 68 2126.0 69 1695.0 70 1656.0 71 1617.0 72 1335.0 73 1053.0 74 935.0 75 597.5 76 378.0 77 299.0 78 220.0 79 180.0 80 140.0 81 130.5 82 121.0 83 79.0 84 37.0 85 38.0 86 39.0 87 30.0 88 21.0 89 26.0 90 31.0 91 18.5 92 6.0 93 5.0 94 4.0 95 2.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 263964.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 29.386583018896516 #Duplication Level Percentage of deduplicated Percentage of total 1 79.82983112027846 23.459259596005516 2 7.719479180095398 4.536982315770333 3 2.551244037643419 2.2491703414101925 4 1.3059172360448628 1.5350578109136095 5 0.910145674874307 1.337303571699171 6 0.7296635297150961 1.286539073510024 7 0.5775428645094752 1.18804079344153 8 0.5582054918138455 1.3123001621433226 9 0.4860126337501611 1.2854025548938492 >10 5.123114606162176 30.69888318103984 >50 0.12633750161144774 2.388204452122259 >100 0.06703622534484982 4.433937961237138 >500 0.0025783163594173004 0.4053583064357261 >1k 0.00902410725796055 7.040732827203709 >5k 0.0 0.0 >10k+ 0.003867474539125951 16.84282705217378 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source AATCTGTCTCTTATACACATCTGACGCCGAGAACTTCGTATGCCGTCTTCT 16718 6.3334394084041765 No Hit AATGATACGGCTGTCTCTTATACACATCTGACGCCGAGAACTTCGTATGCC 14159 5.363989028806959 No Hit AATGATACCTGTCTCTTATACACATCTGACGCCGAGAACTTCGTATGCCGT 13582 5.145398614962646 No Hit CTGTCTCTTATACACATCTGACGCCGAGAACTTCGTATGCCGTCTTCTGCT 3712 1.406252367747117 No Hit AATGACTGTCTCTTATACACATCTGACGCCGAGAACTTCGTATGCCGTCTT 3509 1.3293479413859466 No Hit AACTGTCTCTTATACACATCTGACGCCGAGAACTTCGTATGCCGTCTTCTG 3320 1.2577472685669258 No Hit AATGATCTGTCTCTTATACACATCTGACGCCGAGAACTTCGTATGCCGTCT 3095 1.172508372353806 No Hit AATGCTGTCTCTTATACACATCTGACGCCGAGAACTTCGTATGCCGTCTTC 1796 0.6803958115500598 No Hit AATGATACGGCGACTGTCTCTTATACACATCTGACGCCGAGAACTTCGTAT 1626 0.6159930899668137 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1527 0.5784879756330409 No Hit AATCTGTCTCTTATACACATCTGACGCCGAGAACTTCGTATGCCGTCTTCC 559 0.2117713021472625 No Hit AATGATACCTGTCTCTTATACACATCTGACGCCGAGAACTTCGTATGCCGG 511 0.1935870042884636 No Hit AATGATACGGCGCTGTCTCTTATACACATCTGACGCCGAGAACTTCGTATG 486 0.18411601582033915 No Hit AATGATACGGCCTGTCTCTTATACACATCTGACGCCGAGAACTTCGTATGC 468 0.17729690412328955 No Hit AATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCCGAGAACTTC 433 0.16403752026791532 No Hit AATGATACGGCGACCTGTCTCTTATACACATCTGACGCCGAGAACTTCGTA 418 0.15835492718704064 No Hit AATCTGACTCTTATACACATCTGACGCCGAGAACTTCGTATGCCGTCTTCT 403 0.15267233410616599 No Hit AATGATACGGCTGTCTCTTATACACATCTGACGCCGAGCACTTCGTATGCC 394 0.1492627782576412 No Hit AATGATACCTGTCTCTTCTACACATCTGACGCCGAGAACTTCGTATGCCGT 376 0.1424436665605916 No Hit CAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 360 0.13638223394099194 No Hit TGCAAAGGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGG 311 0.11781909654346805 No Hit AATGATACCTGTCTCTTATACACATCTGACGCCGAGAACTTCGTATGCCGC 300 0.11365186161749329 No Hit AATCTGTCTCTTATACCCATCTGACGCCGAGAACTTCGTATGCCGTCTTCT 298 0.11289418254004334 No Hit AAACTGTCTCTTATACACATCTGACGCCGAGAACTTCGTATGCCGTCTTCT 297 0.11251534300131835 No Hit AACTGTCTCTTATACACATCTGACGCCGAGAACTTCGTATGCCGTCTTCTT 292 0.11062114530769346 No Hit GAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 292 0.11062114530769346 No Hit AATCTGTATCTTATACACATCTGACGCCGAGAACTTCGTATGCCGTCTTCT 272 0.10304435453319391 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 3.7883953872497767E-4 0.0 0.0 1.763498052764771 0.0 2 3.7883953872497767E-4 0.0 0.0 1.9665560455213589 0.0 3 3.7883953872497767E-4 0.0 0.0 3.8285523783546243 0.0 4 3.7883953872497767E-4 0.0 0.0 12.507766210543862 0.0 5 3.7883953872497767E-4 0.0 0.0 13.550332621115 0.0 6 3.7883953872497767E-4 0.0 0.0 15.977178706187207 0.0 7 3.7883953872497767E-4 0.0 0.0 18.031246685154038 0.0 8 3.7883953872497767E-4 0.0 0.0 18.536618629813155 0.0 9 3.7883953872497767E-4 0.0 0.0 25.341334424391206 0.0 10 3.7883953872497767E-4 0.0 0.0 26.19031383067388 0.0 11 3.7883953872497767E-4 0.0 0.0 33.4844903092846 0.0 12 3.7883953872497767E-4 0.0 0.0 34.21375642133018 0.0 13 3.7883953872497767E-4 0.0 0.0 34.74072221969663 0.0 14 3.7883953872497767E-4 0.0 0.0 35.76283129517662 0.0 15 3.7883953872497767E-4 0.0 0.0 36.15720325498932 0.0 16 3.7883953872497767E-4 0.0 0.0 36.576578624357865 0.0 17 3.7883953872497767E-4 0.0 0.0 36.967541028322046 0.0 18 3.7883953872497767E-4 0.0 0.0 37.73999484778227 0.0 19 3.7883953872497767E-4 0.0 0.0 37.999499931808884 0.0 20 3.7883953872497767E-4 0.0 0.0 38.23475928535709 0.0 21 3.7883953872497767E-4 0.0 0.0 38.53896743495325 0.0 22 3.7883953872497767E-4 0.0 0.0 38.79013804912791 0.0 23 3.7883953872497767E-4 0.0 0.0 39.06441787516479 0.0 24 3.7883953872497767E-4 0.0 0.0 39.26141443530178 0.0 25 3.7883953872497767E-4 0.0 0.0 39.436059462654 0.0 26 3.7883953872497767E-4 0.0 0.0 39.62244851570669 0.0 27 3.7883953872497767E-4 0.0 0.0 39.78610719643588 0.0 28 3.7883953872497767E-4 0.0 0.0 39.95772150747829 0.0 29 3.7883953872497767E-4 0.0 0.0 40.15396038853783 0.0 30 3.7883953872497767E-4 0.0 0.0 40.44301495658499 0.0 31 3.7883953872497767E-4 0.0 0.0 40.624857935172976 0.0 32 3.7883953872497767E-4 0.0 0.0 40.83284084193299 0.0 33 3.7883953872497767E-4 0.0 0.0 41.020366413601856 0.0 34 3.7883953872497767E-4 0.0 0.0 41.18970768741192 0.0 35 3.7883953872497767E-4 0.0 0.0 41.413980694337106 0.0 36 3.7883953872497767E-4 0.0 0.0 41.57422981921777 0.0 37 3.7883953872497767E-4 0.0 0.0 41.748496007031264 0.0 38 3.7883953872497767E-4 0.0 0.0 41.9250352320771 0.0 39 3.7883953872497767E-4 0.0 0.0 42.13263929929839 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CATGGGA 90 0.0 45.000004 4 TTAGGGA 90 0.0 45.000004 4 AATCCGG 30 2.1591277E-6 45.000004 2 TCCTATA 60 0.0 45.000004 16 CCTATAC 60 0.0 45.000004 17 GTTTGTC 25 3.8826154E-5 45.0 36 TTCTACG 35 1.2071723E-7 45.0 1 CTAGACG 20 7.0234045E-4 45.0 1 CGGGTCA 20 7.0234045E-4 45.0 6 TAATAGC 20 7.0234045E-4 45.0 17 TAGACGG 20 7.0234045E-4 45.0 2 CGGCCGT 20 7.0234045E-4 45.0 34 CGGCCAG 20 7.0234045E-4 45.0 42 GCGCGAC 25 3.8826154E-5 45.0 9 GGCCGTG 20 7.0234045E-4 45.0 35 GACCGAT 20 7.0234045E-4 45.0 9 CACGCCG 35 1.2071723E-7 45.0 26 CGACCCG 25 3.8826154E-5 45.0 32 TATGCCA 20 7.0234045E-4 45.0 10 AAACGCG 20 7.0234045E-4 45.0 1 >>END_MODULE