##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3548586_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1129174 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.78297676000333 31.0 31.0 34.0 30.0 34.0 2 31.986553002460205 33.0 31.0 34.0 30.0 34.0 3 32.15533655574783 34.0 31.0 34.0 30.0 34.0 4 35.863594981818565 37.0 35.0 37.0 35.0 37.0 5 35.61412235846734 37.0 35.0 37.0 33.0 37.0 6 34.17152272369006 37.0 35.0 37.0 32.0 37.0 7 35.00394978984638 37.0 35.0 37.0 32.0 37.0 8 35.72435072008388 37.0 35.0 37.0 33.0 37.0 9 37.44813465418084 39.0 37.0 39.0 35.0 39.0 10 36.85343091498741 39.0 37.0 39.0 32.0 39.0 11 36.88804825474196 39.0 37.0 39.0 33.0 39.0 12 36.82873764362268 39.0 37.0 39.0 33.0 39.0 13 36.811633105261016 39.0 37.0 39.0 33.0 39.0 14 37.986713296622135 40.0 37.0 41.0 33.0 41.0 15 37.9777545356163 40.0 37.0 41.0 33.0 41.0 16 37.89862855503226 40.0 37.0 41.0 33.0 41.0 17 37.887358369923504 40.0 37.0 41.0 33.0 41.0 18 37.79750596453691 39.0 37.0 41.0 33.0 41.0 19 37.80917909905825 40.0 36.0 41.0 33.0 41.0 20 37.68604838581122 39.0 36.0 41.0 33.0 41.0 21 37.64562680330932 39.0 36.0 41.0 33.0 41.0 22 37.5781305626945 39.0 36.0 41.0 32.0 41.0 23 37.45333491561088 39.0 36.0 41.0 32.0 41.0 24 37.27072886906712 39.0 36.0 41.0 32.0 41.0 25 37.29133508210426 39.0 36.0 41.0 32.0 41.0 26 37.2620039072809 39.0 36.0 41.0 32.0 41.0 27 37.21679563999879 39.0 35.0 41.0 32.0 41.0 28 37.11369018415231 39.0 35.0 41.0 31.0 41.0 29 36.96652508825035 39.0 35.0 40.0 31.0 41.0 30 36.96260895132194 39.0 35.0 40.0 31.0 41.0 31 36.92516033844208 39.0 35.0 40.0 31.0 41.0 32 36.844516434136814 39.0 35.0 40.0 31.0 41.0 33 36.82023054020018 39.0 35.0 40.0 31.0 41.0 34 36.686421224718245 39.0 35.0 40.0 31.0 41.0 35 36.603612906425404 39.0 35.0 40.0 30.0 41.0 36 36.535111506286896 39.0 35.0 40.0 30.0 41.0 37 36.51991544261558 39.0 35.0 40.0 30.0 41.0 38 36.428865701831604 39.0 35.0 40.0 30.0 41.0 39 36.399700134788795 39.0 35.0 40.0 30.0 41.0 40 36.25448336571689 38.0 35.0 40.0 30.0 41.0 41 36.15054012933348 38.0 35.0 40.0 30.0 41.0 42 36.08246381868516 38.0 35.0 40.0 30.0 41.0 43 36.0027701665111 38.0 35.0 40.0 30.0 41.0 44 35.873316247097435 38.0 35.0 40.0 29.0 41.0 45 35.736790786893785 38.0 35.0 40.0 29.0 41.0 46 35.566853292760904 38.0 34.0 40.0 28.0 41.0 47 35.452397947526244 38.0 34.0 40.0 28.0 41.0 48 35.33276979455779 38.0 34.0 40.0 28.0 41.0 49 35.15599721566384 37.0 34.0 40.0 27.0 41.0 50 35.071161751864636 37.0 34.0 40.0 27.0 41.0 51 33.89060764771417 36.0 32.0 39.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 2.0 9 7.0 10 13.0 11 15.0 12 13.0 13 24.0 14 35.0 15 88.0 16 127.0 17 275.0 18 495.0 19 962.0 20 1583.0 21 2454.0 22 3334.0 23 4326.0 24 5455.0 25 6786.0 26 8211.0 27 9904.0 28 12687.0 29 16542.0 30 21479.0 31 27828.0 32 37193.0 33 50858.0 34 75998.0 35 100711.0 36 114979.0 37 158642.0 38 226826.0 39 241287.0 40 35.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 21.12322812958853 32.45124312107788 20.14047436444693 26.285054384886653 2 23.60389098580024 30.16257901793701 20.135426426750882 26.09810356951187 3 20.751009144737658 32.00578475947905 20.523409146863106 26.719796948920184 4 20.663157316764288 32.900421015715914 18.689325117298132 27.747096550221666 5 18.560558425893618 35.55395359793973 16.477619923944406 29.40786805222224 6 18.32534224131976 42.29764411862122 17.36348870944602 22.013524930612995 7 86.38385226723251 6.890612075729692 3.683666113459928 3.041869543577872 8 87.44294501998806 6.434880718117846 3.154783939410578 2.9673903224835145 9 80.57252469504257 9.695582788835026 5.545026718645665 4.18686579747674 10 35.161277181373286 37.33800105209649 12.277115838657284 15.22360592787294 11 25.91407524438218 29.955436451778027 24.291561796499035 19.838926507340766 12 25.372971747489757 26.964666207333853 28.17767677966372 19.484685265512667 13 27.04773577854255 24.96665704311293 27.275867138279843 20.709740040064684 14 21.772729446480348 29.411144783709155 27.08484254862404 21.73128322118646 15 20.092208995247855 31.497094336213905 27.88578199639737 20.524914672140877 16 22.55967636520147 29.45675334359452 27.139130018934193 20.844440272269818 17 22.30320570611792 28.272082070610903 27.562979664781512 21.861732558489656 18 21.956226409747302 29.61456781682894 26.739988699704387 21.689217073719373 19 22.271855356216136 31.83893713457802 24.846303581201834 21.04290392800401 20 23.246638693416603 30.30817216832835 26.109882090802657 20.335307047452385 21 25.32665470512073 29.4098163790523 25.86448147052624 19.399047445300724 22 22.862995428516776 28.564065414187716 25.176544978896075 23.396394178399433 23 21.747135516758267 30.201014192675352 25.693294390412813 22.35855590015356 24 21.061501593199985 30.901260567459044 25.770607541441798 22.266630297899173 25 22.55604539247273 30.56933652386612 24.58894731901372 22.285670764647435 26 22.938006011473874 30.228733569848405 24.629153699961208 22.204106718716513 27 21.623948124912545 28.9521366946104 26.259106213922745 23.16480896655431 28 20.563704088121053 30.719711931022147 28.141721293618165 20.57486268723864 29 22.749461110510868 29.823127347955232 24.954612840890775 22.472798700643125 30 22.833504845134588 29.7615779321876 26.00865765595028 21.396259566727537 31 22.04620368517164 29.71729777695909 23.602208339901555 24.63429019796772 32 22.251132243569195 29.265551633317806 26.638232902989266 21.845083220123737 33 21.618545945974667 29.361019647990478 25.812585128598425 23.207849277436427 34 21.059907507611758 30.469086252428767 26.754158349377512 21.716847890581963 35 22.484134420381626 28.502958799972365 26.539045355277395 22.47386142436861 36 22.881770214333663 31.280475816836024 25.18035307224573 20.657400896584583 37 21.748109680173293 30.119273026123523 24.92264256881579 23.209974724887395 38 21.2961864159111 29.717474897579997 26.2270473815373 22.759291304971597 39 21.132881203428347 28.166783861477505 25.360838984957145 25.339495950137003 40 21.466842134161784 28.71196113265095 26.740520061567132 23.08067667162014 41 20.368605724184228 27.917486587540978 27.997456547883676 23.71645114039112 42 21.219404626744858 29.310983072582257 25.24943011440221 24.220182186270673 43 21.051582838428796 28.2473737439934 26.44942232109489 24.251621096482918 44 21.618988747526956 27.91031320239396 26.478470102924796 23.99222794715429 45 22.758494262177486 27.145772042218468 27.222642391695167 22.873091303908875 46 22.617506247929903 27.370006748295655 27.77295616087512 22.23953084289932 47 21.00181194395195 29.056637860949685 27.47468503525586 22.466865159842506 48 20.74498704362658 28.502958799972365 27.539953984062688 23.212100172338364 49 20.229211795524872 28.749422143974268 27.971331256298853 23.05003480420201 50 21.217810541156634 27.039145428428213 28.11302775303009 23.630016277385064 51 21.561778786971715 26.733346676420112 27.910933124567162 23.793941412041015 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 18522.0 1 13540.5 2 8559.0 3 5478.0 4 2397.0 5 2034.0 6 1671.0 7 1706.0 8 1741.0 9 1791.5 10 1842.0 11 2111.0 12 2380.0 13 2619.0 14 2858.0 15 2532.0 16 2206.0 17 2557.5 18 2909.0 19 3422.0 20 3935.0 21 4177.5 22 4420.0 23 6107.0 24 7794.0 25 7424.0 26 10047.5 27 13041.0 28 15020.5 29 17000.0 30 22385.0 31 27770.0 32 28566.5 33 29363.0 34 34993.0 35 40623.0 36 41138.0 37 41653.0 38 43463.0 39 45273.0 40 48714.5 41 52156.0 42 54511.5 43 56867.0 44 61627.5 45 66388.0 46 71280.0 47 76172.0 48 76541.5 49 76911.0 50 77772.0 51 78633.0 52 75583.5 53 72534.0 54 67227.0 55 61920.0 56 61405.5 57 60891.0 58 56476.5 59 52062.0 60 48565.5 61 45069.0 62 41250.0 63 37431.0 64 33376.5 65 29322.0 66 26052.5 67 22783.0 68 19783.0 69 16783.0 70 15752.5 71 14722.0 72 12341.5 73 9961.0 74 7799.0 75 4834.5 76 4032.0 77 3566.5 78 3101.0 79 2267.0 80 1433.0 81 1031.0 82 629.0 83 463.0 84 297.0 85 274.0 86 251.0 87 174.5 88 98.0 89 63.0 90 28.0 91 23.0 92 18.0 93 17.5 94 17.0 95 13.5 96 10.0 97 7.0 98 4.0 99 3.5 100 3.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1129174.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 19.352139864668814 #Duplication Level Percentage of deduplicated Percentage of total 1 77.0957054889377 14.919668755872378 2 9.280417287028529 3.591918666821329 3 3.5289120630601243 2.048759994433695 4 1.7652565149044612 1.3664596389379586 5 1.0701781113191722 1.0355118245177868 6 0.7244697551995691 0.8412024018206664 7 0.501265438140467 0.6790391207753168 8 0.38039076348740014 0.5889100206589059 9 0.29808961214621793 0.519180467981264 >10 3.0092026938749874 13.560032197070662 >50 1.0896679601540684 15.332158462108572 >100 1.2461379079969277 42.0404561177175 >500 0.007027093466148088 0.8294440436234898 >1k 0.0028108373864592353 1.1922634842816169 >5k 0.0 0.0 >10k+ 4.6847289774320583E-4 1.4549948033788813 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 16049 1.4213044225247835 No Hit CAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 3286 0.291009180161782 No Hit GAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 2627 0.23264793557060295 No Hit CTGTCTCTTATACACATCTGACGCATACGCACTCGTATGCCGTCTTCTGCT 2146 0.19005042624077423 TruSeq Adapter, Index 13 (95% over 22bp) TGCAAAGGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGG 2138 0.18934194375711805 No Hit TAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1726 0.152855095848824 No Hit ATAAGCAAACCAATTTGAAATAAAATATGAACATGTGCCATTGTATTATAA 1228 0.1087520612412259 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 8.856031045702434E-5 0.0 0.0 0.2237033442144435 0.0 2 8.856031045702434E-5 0.0 0.0 0.2964999194101175 0.0 3 8.856031045702434E-5 0.0 0.0 0.39028528818410624 0.0 4 8.856031045702434E-5 0.0 0.0 0.8160832608614793 0.0 5 8.856031045702434E-5 0.0 0.0 0.8850717427075012 0.0 6 8.856031045702434E-5 0.0 0.0 1.3259249681625684 0.0 7 8.856031045702434E-5 0.0 0.0 1.6619227860365187 0.0 8 8.856031045702434E-5 0.0 0.0 1.9924298646621335 0.0 9 8.856031045702434E-5 0.0 0.0 2.4691500158522954 0.0 10 8.856031045702434E-5 0.0 0.0 3.2309458064036187 0.0 11 8.856031045702434E-5 0.0 0.0 3.8464399640799383 0.0 12 8.856031045702434E-5 0.0 0.0 4.141700039143657 0.0 13 8.856031045702434E-5 0.0 0.0 4.26780992123446 0.0 14 8.856031045702434E-5 0.0 0.0 4.405786884926504 0.0 15 8.856031045702434E-5 0.0 0.0 4.53269380981142 0.0 16 8.856031045702434E-5 0.0 0.0 4.792175519450501 0.0 17 8.856031045702434E-5 0.0 0.0 5.095937384318095 0.0 18 8.856031045702434E-5 0.0 0.0 5.539181738155501 0.0 19 8.856031045702434E-5 0.0 0.0 5.713556989445382 0.0 20 8.856031045702434E-5 0.0 0.0 5.958160566927684 0.0 21 8.856031045702434E-5 0.0 0.0 6.160875117563812 0.0 22 8.856031045702434E-5 0.0 0.0 6.419205543166952 0.0 23 8.856031045702434E-5 0.0 0.0 6.688783128198134 0.0 24 8.856031045702434E-5 0.0 0.0 6.883438690582674 0.0 25 8.856031045702434E-5 0.0 0.0 7.048692229895481 0.0 26 8.856031045702434E-5 0.0 0.0 7.203938454126645 0.0 27 8.856031045702434E-5 0.0 0.0 7.37344288834139 0.0 28 8.856031045702434E-5 0.0 0.0 7.550652069565895 0.0 29 8.856031045702434E-5 0.0 0.0 7.721750589368866 0.0 30 8.856031045702434E-5 0.0 0.0 7.941114478370915 0.0 31 8.856031045702434E-5 0.0 0.0 8.116109651833996 0.0 32 8.856031045702434E-5 0.0 0.0 8.30137782131009 0.0 33 8.856031045702434E-5 0.0 0.0 8.497716029593313 0.0 34 8.856031045702434E-5 0.0 0.0 8.677759140752444 0.0 35 8.856031045702434E-5 0.0 0.0 8.901019683414603 0.0 36 8.856031045702434E-5 0.0 0.0 9.094081160210916 0.0 37 8.856031045702434E-5 0.0 0.0 9.29360753967059 0.0 38 8.856031045702434E-5 0.0 0.0 9.5112002224635 0.0 39 8.856031045702434E-5 0.0 0.0 9.730741232086464 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AATTTCG 35 1.2119017E-7 45.000004 13 CGTATAG 50 2.1827873E-11 45.000004 1 CGTCTAA 35 1.2119017E-7 45.000004 35 CCTCGCG 25 3.8907616E-5 45.000004 1 TATCTCG 25 3.8907616E-5 45.000004 1 CGTAGGA 25 3.8907616E-5 45.000004 26 CTCGCAC 25 3.8907616E-5 45.000004 38 TATAACG 25 3.8907616E-5 45.000004 1 TATCGGA 25 3.8907616E-5 45.000004 14 TCGCGAC 35 1.2119017E-7 45.000004 36 ATTTCGA 35 1.2119017E-7 45.000004 14 CCGATTA 20 7.0332346E-4 45.0 19 CGCGATT 20 7.0332346E-4 45.0 29 ATCCGTA 20 7.0332346E-4 45.0 11 GTAATCG 45 3.8562575E-10 45.0 30 CTAACGG 135 0.0 45.0 2 GCATTAG 40 6.8157533E-9 45.0 1 CCGTAAC 20 7.0332346E-4 45.0 13 TACCTCG 20 7.0332346E-4 45.0 29 CGAATGT 20 7.0332346E-4 45.0 40 >>END_MODULE