##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3548585_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1115696 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.763069868494643 31.0 31.0 34.0 30.0 34.0 2 31.976418307495948 33.0 31.0 34.0 30.0 34.0 3 32.14198670605613 34.0 31.0 34.0 30.0 34.0 4 35.862170340307756 37.0 35.0 37.0 35.0 37.0 5 35.6277794309561 37.0 35.0 37.0 33.0 37.0 6 32.67240897161951 37.0 35.0 37.0 26.0 37.0 7 34.2510271615207 37.0 35.0 37.0 27.0 37.0 8 35.421637256026735 37.0 35.0 37.0 32.0 37.0 9 37.31790649065695 39.0 37.0 39.0 34.0 39.0 10 36.8132833675123 39.0 37.0 39.0 32.0 39.0 11 36.89211935867835 39.0 37.0 39.0 33.0 39.0 12 36.846538842121866 39.0 37.0 39.0 33.0 39.0 13 36.84633807058554 39.0 37.0 39.0 33.0 39.0 14 38.00018732701381 40.0 37.0 41.0 33.0 41.0 15 38.0253608509845 40.0 37.0 41.0 33.0 41.0 16 37.975490635441915 40.0 37.0 41.0 33.0 41.0 17 37.97060937746483 40.0 37.0 41.0 33.0 41.0 18 37.88781173366222 40.0 37.0 41.0 33.0 41.0 19 37.89548407451492 40.0 37.0 41.0 33.0 41.0 20 37.76791437811016 39.0 36.0 41.0 33.0 41.0 21 37.71715682408111 39.0 36.0 41.0 33.0 41.0 22 37.614053469762375 39.0 36.0 41.0 33.0 41.0 23 37.493304627783914 39.0 36.0 41.0 32.0 41.0 24 37.3749399477994 39.0 36.0 41.0 32.0 41.0 25 37.36432146391132 39.0 36.0 41.0 32.0 41.0 26 37.336709999856595 39.0 36.0 41.0 32.0 41.0 27 37.26619616813182 39.0 36.0 41.0 32.0 41.0 28 37.198235003083276 39.0 35.0 41.0 32.0 41.0 29 37.02233314451249 39.0 35.0 41.0 31.0 41.0 30 37.019907752649466 39.0 35.0 40.0 31.0 41.0 31 36.69415414234702 39.0 35.0 40.0 31.0 41.0 32 36.79090451162324 39.0 35.0 40.0 31.0 41.0 33 36.81422358778735 39.0 35.0 40.0 31.0 41.0 34 36.71009576085242 39.0 35.0 40.0 31.0 41.0 35 36.70100995253187 39.0 35.0 40.0 31.0 41.0 36 36.620849227746625 39.0 35.0 40.0 31.0 41.0 37 36.584333008274655 39.0 35.0 40.0 31.0 41.0 38 36.48234286042076 39.0 35.0 40.0 30.0 41.0 39 36.44266717815606 39.0 35.0 40.0 30.0 41.0 40 36.31517545998193 39.0 35.0 40.0 30.0 41.0 41 36.265299866630336 38.0 35.0 40.0 30.0 41.0 42 36.18886775609126 38.0 35.0 40.0 30.0 41.0 43 36.118885431156876 38.0 35.0 40.0 30.0 41.0 44 35.94473315311698 38.0 35.0 40.0 30.0 41.0 45 35.79742151984053 38.0 35.0 40.0 29.0 41.0 46 35.53712391188998 38.0 34.0 40.0 28.0 41.0 47 35.48898624714976 38.0 34.0 40.0 28.0 41.0 48 35.47304014713686 38.0 34.0 40.0 28.0 41.0 49 35.33422993360198 38.0 34.0 40.0 28.0 41.0 50 35.21675617730995 37.0 34.0 40.0 27.0 41.0 51 34.11915163270282 36.0 33.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 7.0 10 5.0 11 11.0 12 13.0 13 28.0 14 39.0 15 89.0 16 140.0 17 253.0 18 525.0 19 913.0 20 1546.0 21 2404.0 22 3291.0 23 4274.0 24 5245.0 25 6555.0 26 7728.0 27 9592.0 28 12146.0 29 15597.0 30 21014.0 31 27537.0 32 36408.0 33 51176.0 34 76058.0 35 100870.0 36 117288.0 37 162049.0 38 220972.0 39 231891.0 40 31.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 21.166428848001605 32.499802813669675 20.11381236465847 26.219955973670245 2 23.74024823966385 30.009608352095913 20.09346632057478 26.156677087665457 3 20.79849708164231 32.02745192238746 20.55739197774304 26.61665901822719 4 20.72786852332535 32.89032137786637 18.650241642884797 27.731568455923476 5 18.61931924108359 35.42156644820811 16.453227402446544 29.505886908261747 6 17.543130028251426 44.765599231331834 16.57700663980152 21.11426410061522 7 86.44200570764797 6.858230198907229 3.6773458002896846 3.0224182931551247 8 87.31661671279632 6.472372402518249 3.1087321277480604 3.1022787569373733 9 80.55581448710043 9.73885359452754 5.5331380591128765 4.172193859259153 10 35.1914858527771 37.31061149273637 12.331136797120362 15.166765857366164 11 25.979209390371572 29.934050135520785 24.383344566978817 19.703395907128822 12 25.465180479270337 26.86574120548967 28.123341842222256 19.54573647301774 13 27.041237039480286 24.981984339820166 27.340332850525588 20.636445770173953 14 21.815082244625778 29.32501326526222 27.036845162123015 21.823059327988986 15 20.123582051024652 31.494062898854168 27.920777702886806 20.46157734723437 16 22.514914456984698 29.465642970845106 27.19575941833618 20.82368315383402 17 22.29549984942135 28.353063917052673 27.506776039351223 21.844660194174757 18 21.968529061679885 29.529997418651675 26.807391977743038 21.6940815419254 19 22.230697250864033 31.846040498487042 24.89226455952159 21.030997691127332 20 23.32077913696921 30.138406877859204 26.17200384334084 20.36881014183075 21 25.365153231704696 29.389636603519236 25.903920064246893 19.341290100529175 22 22.757991424187235 28.603759447017822 25.39168375614863 23.246565372646312 23 21.872176650270326 30.22167328734709 25.70225222641293 22.203897835969656 24 21.065505298934475 30.856882161448993 25.85435459121481 22.223257948401713 25 22.43227545854785 30.725036210580658 24.593975419827625 22.24871291104387 26 22.946304369649077 30.231442973713268 24.666755101748148 22.155497554889504 27 21.636270095079663 29.014444794997917 26.218790781718315 23.130494328204097 28 20.58141285798282 30.7086338931035 28.205353429608067 20.504599819305618 29 22.72904088568929 29.761332836184767 25.002778534654603 22.50684774347134 30 22.852013451692933 29.7878633606287 26.07600995253187 21.284113235146492 31 22.10270539645208 29.673136768438713 23.679030847112475 24.545126987996728 32 22.242438800533478 29.373144655891924 26.68155124693465 21.702865296639946 33 21.599073582768067 29.407562633548924 25.84808048070442 23.14528330297859 34 21.125916020134518 30.48904002523985 26.737838981227863 21.64720497339777 35 22.4777179446731 28.427456941675867 26.659681490298432 22.435143623352598 36 22.92864723006984 31.376916292610176 25.143318610087334 20.55111786723265 37 21.640572342286788 30.00109348783181 25.14699344624342 23.21134072363798 38 21.219579527039624 29.783650743571727 26.326615852346873 22.670153877041773 39 21.15307395562949 28.166543574593796 25.515283733203308 25.165098736573405 40 21.57084008547131 28.71508009350217 26.73506044657326 22.979019374453255 41 20.31637650399392 28.018295306248298 28.024300526308245 23.64102766344954 42 21.145724283317318 29.38838178141716 25.2650363539889 24.20085758127662 43 21.069269765240712 28.284407222038976 26.47943525834994 24.166887754370368 44 21.63582194432892 27.956002351895137 26.47181669558733 23.93635900818861 45 22.732894982145673 27.012286500982345 27.364353730765366 22.89046478610661 46 22.48757726118943 27.498798955988015 27.74124851213951 22.272375270683053 47 20.94405644548336 29.100758629590857 27.576329035866397 22.378855889059384 48 20.797959300741418 28.62527068305345 27.54451033256371 23.032259683641424 49 20.16759045474753 28.89846338070586 27.99301960390644 22.94092656064017 50 21.1838170971304 27.19333940428217 28.17828512426324 23.44455837432419 51 21.525128708895615 26.786060002007716 27.938434842466048 23.75037644663062 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 18234.0 1 13289.0 2 8344.0 3 5400.0 4 2456.0 5 2014.0 6 1572.0 7 1591.5 8 1611.0 9 1698.0 10 1785.0 11 2070.5 12 2356.0 13 2573.0 14 2790.0 15 2564.5 16 2339.0 17 2619.0 18 2899.0 19 3436.0 20 3973.0 21 4248.5 22 4524.0 23 6356.5 24 8189.0 25 7709.0 26 10031.5 27 12834.0 28 15016.0 29 17198.0 30 22385.0 31 27572.0 32 28693.0 33 29814.0 34 35222.5 35 40631.0 36 40998.0 37 41365.0 38 43040.0 39 44715.0 40 48347.0 41 51979.0 42 54121.0 43 56263.0 44 60835.0 45 65407.0 46 70497.5 47 75588.0 48 75560.0 49 75532.0 50 76514.0 51 77496.0 52 74220.5 53 70945.0 54 66019.5 55 61094.0 56 60320.0 57 59546.0 58 55444.5 59 51343.0 60 47899.0 61 44455.0 62 40628.0 63 36801.0 64 32802.5 65 28804.0 66 25475.5 67 22147.0 68 19415.0 69 16683.0 70 15533.0 71 14383.0 72 12081.0 73 9779.0 74 7543.0 75 4680.0 76 4053.0 77 3545.5 78 3038.0 79 2224.5 80 1411.0 81 999.5 82 588.0 83 423.0 84 258.0 85 236.5 86 215.0 87 152.0 88 89.0 89 58.0 90 27.0 91 19.0 92 11.0 93 13.5 94 16.0 95 9.5 96 3.0 97 2.5 98 2.0 99 2.5 100 3.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1115696.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 19.4629970884548 #Duplication Level Percentage of deduplicated Percentage of total 1 75.6743943424908 14.728505167584787 2 9.338802332979187 3.6352216523285756 3 3.5604744341437304 2.0789251063577154 4 1.861784115574253 1.449435952830123 5 1.2529715870987401 1.2193291175809684 6 0.887042947731314 1.0358708585417356 7 0.6402959283162889 0.8723454451998576 8 0.5080197493682437 0.7910069522265332 9 0.41378303699175906 0.7248112239800333 >10 3.580955603086494 15.426752740986686 >50 1.1120504188490568 15.697136182346949 >100 1.1586968290273136 38.886724939233616 >500 0.007463425629805563 0.8703835451874923 >1k 0.0027987846111770863 1.1579088072724812 >5k 0.0 0.0 >10k+ 4.664641018628477E-4 1.425642308342463 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 15703 1.4074622477807575 No Hit CAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 3124 0.2800045890636876 No Hit GAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 2484 0.222641292968694 No Hit TGCAAAGGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGG 2131 0.19100184996629904 No Hit CTGTCTCTTATACACATCTGACGCATACGCACTCGTATGCCGTCTTCTGCT 1960 0.17567509429091796 TruSeq Adapter, Index 13 (95% over 22bp) TAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1760 0.15774906426123245 No Hit ATAAGCAAACCAATTTGAAATAAAATATGAACATGTGCCATTGTATTATAA 1295 0.11607104444221365 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.6889045044528256E-4 0.0 0.0 0.20928640059657827 0.0 2 2.6889045044528256E-4 0.0 0.0 0.282603863417992 0.0 3 2.6889045044528256E-4 0.0 0.0 0.36739398545840446 0.0 4 2.6889045044528256E-4 0.0 0.0 0.7636488792646026 0.0 5 3.585206005937101E-4 0.0 0.0 0.8298855602242905 0.0 6 3.585206005937101E-4 0.0 0.0 1.2489961423183376 0.0 7 3.585206005937101E-4 0.0 0.0 1.564583900990951 0.0 8 3.585206005937101E-4 0.0 0.0 1.8904791269306334 0.0 9 3.585206005937101E-4 0.0 0.0 2.3347757812163885 0.0 10 3.585206005937101E-4 0.0 0.0 3.0730593279889864 0.0 11 3.585206005937101E-4 0.0 0.0 3.6542212215513903 0.0 12 3.585206005937101E-4 0.0 0.0 3.9511659089931306 0.0 13 3.585206005937101E-4 0.0 0.0 4.073242173495289 0.0 14 3.585206005937101E-4 0.0 0.0 4.2068807273665945 0.0 15 3.585206005937101E-4 0.0 0.0 4.331377005922761 0.0 16 3.585206005937101E-4 0.0 0.0 4.576694726879007 0.0 17 3.585206005937101E-4 0.0 0.0 4.872026071618075 0.0 18 3.585206005937101E-4 0.0 0.0 5.300906340078301 0.0 19 3.585206005937101E-4 0.0 0.0 5.468425090705712 0.0 20 4.4815075074213764E-4 0.0 0.0 5.696623452983609 0.0 21 4.4815075074213764E-4 0.0 0.0 5.8994564827695 0.0 22 4.4815075074213764E-4 0.0 0.0 6.151586095137026 0.0 23 4.4815075074213764E-4 0.0 0.0 6.419580244080825 0.0 24 4.4815075074213764E-4 0.0 0.0 6.601170928281539 0.0 25 4.4815075074213764E-4 0.0 0.0 6.7642081714015285 0.0 26 4.4815075074213764E-4 0.0 0.0 6.907616411639013 0.0 27 4.4815075074213764E-4 0.0 0.0 7.0702055040082605 0.0 28 4.4815075074213764E-4 0.0 0.0 7.237544994335375 0.0 29 4.4815075074213764E-4 0.0 0.0 7.412144526824512 0.0 30 4.4815075074213764E-4 0.0 0.0 7.622596119373019 0.0 31 4.4815075074213764E-4 0.0 0.0 7.795044528258594 0.0 32 4.4815075074213764E-4 0.0 0.0 7.9791448566634635 0.0 33 4.4815075074213764E-4 0.0 0.0 8.170057076479614 0.0 34 4.4815075074213764E-4 0.0 0.0 8.354157404884484 0.0 35 4.4815075074213764E-4 0.0 0.0 8.569717915991452 0.0 36 4.4815075074213764E-4 0.0 0.0 8.751577490642612 0.0 37 4.4815075074213764E-4 0.0 0.0 8.949570492320488 0.0 38 5.377809008905651E-4 0.0 0.0 9.167102866730723 0.0 39 5.377809008905651E-4 0.0 0.0 9.377912979879824 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGCACA 20 7.033197E-4 45.000004 23 TCCGCAA 20 7.033197E-4 45.000004 19 GATCGAC 20 7.033197E-4 45.000004 36 ACGTTGT 20 7.033197E-4 45.000004 40 CCGATAT 40 6.8139343E-9 45.000004 21 CCTAGCG 40 6.8139343E-9 45.000004 1 TAAACCG 40 6.8139343E-9 45.000004 1 ATCACGC 20 7.033197E-4 45.000004 42 AACGGCC 20 7.033197E-4 45.000004 33 TAACACG 55 1.8189894E-12 45.000004 1 CGAATTG 20 7.033197E-4 45.000004 2 CGTCGGA 20 7.033197E-4 45.000004 14 TTCGGAT 40 6.8139343E-9 45.000004 17 TAGGCGT 20 7.033197E-4 45.000004 33 ATACGTT 20 7.033197E-4 45.000004 17 CACGTAT 20 7.033197E-4 45.000004 45 ATCGGCG 20 7.033197E-4 45.000004 38 CCTATCG 20 7.033197E-4 45.000004 12 GATTCGC 40 6.8139343E-9 45.000004 23 TATACGA 40 6.8139343E-9 45.000004 23 >>END_MODULE