##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3548531_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 571354 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.76651603034196 31.0 31.0 34.0 30.0 34.0 2 31.970643418966176 33.0 31.0 34.0 30.0 34.0 3 32.1246372651631 34.0 31.0 34.0 30.0 34.0 4 35.735451226385045 37.0 35.0 37.0 33.0 37.0 5 35.55008803648876 37.0 35.0 37.0 33.0 37.0 6 35.559521767590674 37.0 35.0 37.0 33.0 37.0 7 35.657830346860266 37.0 35.0 37.0 35.0 37.0 8 35.88308474255891 37.0 35.0 37.0 35.0 37.0 9 37.46534897804163 39.0 37.0 39.0 35.0 39.0 10 36.98786041578426 39.0 37.0 39.0 33.0 39.0 11 37.05327695264232 39.0 37.0 39.0 33.0 39.0 12 37.04113736842658 39.0 37.0 39.0 33.0 39.0 13 36.979767359640434 39.0 37.0 39.0 33.0 39.0 14 38.13281083181355 40.0 37.0 41.0 33.0 41.0 15 38.11897002558834 40.0 37.0 41.0 33.0 41.0 16 38.07131480658226 40.0 37.0 41.0 33.0 41.0 17 38.063459781501486 40.0 37.0 41.0 33.0 41.0 18 38.01273641210178 40.0 37.0 41.0 33.0 41.0 19 37.997350154195125 40.0 37.0 41.0 33.0 41.0 20 37.942443738907926 40.0 37.0 41.0 33.0 41.0 21 37.93344756490722 40.0 37.0 41.0 33.0 41.0 22 37.92227585699934 40.0 37.0 41.0 33.0 41.0 23 37.802225940485236 39.0 37.0 41.0 33.0 41.0 24 37.73736947671671 39.0 37.0 41.0 33.0 41.0 25 37.743556534127706 39.0 37.0 41.0 33.0 41.0 26 37.68258907787466 39.0 37.0 41.0 33.0 41.0 27 37.65665069291543 40.0 37.0 41.0 33.0 41.0 28 37.61569359801454 39.0 37.0 41.0 32.0 41.0 29 37.475995617428076 39.0 36.0 41.0 32.0 41.0 30 37.49943992691046 39.0 36.0 41.0 32.0 41.0 31 37.37677516915957 39.0 36.0 41.0 32.0 41.0 32 37.28844464202579 39.0 36.0 41.0 31.0 41.0 33 37.29831067954368 39.0 36.0 41.0 32.0 41.0 34 37.1641784252845 39.0 36.0 41.0 31.0 41.0 35 37.12757939911158 39.0 36.0 41.0 31.0 41.0 36 37.05187676991847 39.0 36.0 41.0 31.0 41.0 37 36.88227788726429 39.0 35.0 41.0 31.0 41.0 38 36.794001617211045 39.0 35.0 40.0 30.0 41.0 39 36.66062196116593 39.0 35.0 40.0 30.0 41.0 40 36.59303689131432 39.0 35.0 40.0 30.0 41.0 41 36.5517770068994 39.0 35.0 40.0 30.0 41.0 42 36.495997227638206 39.0 35.0 40.0 30.0 41.0 43 36.443273347171804 39.0 35.0 40.0 30.0 41.0 44 36.39464325094425 39.0 35.0 40.0 30.0 41.0 45 36.19245686562096 39.0 35.0 40.0 29.0 41.0 46 35.98172761545381 38.0 35.0 40.0 28.0 41.0 47 35.88030888030888 38.0 35.0 40.0 28.0 41.0 48 35.82663287559026 38.0 35.0 40.0 28.0 41.0 49 35.69944552764136 38.0 34.0 40.0 27.0 41.0 50 35.518106112847725 38.0 34.0 40.0 27.0 41.0 51 34.22738267343888 37.0 32.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 2.0 11 0.0 12 2.0 13 1.0 14 2.0 15 7.0 16 33.0 17 65.0 18 138.0 19 244.0 20 499.0 21 853.0 22 1201.0 23 1643.0 24 2230.0 25 2821.0 26 3662.0 27 4643.0 28 5936.0 29 7916.0 30 10538.0 31 13655.0 32 17719.0 33 23008.0 34 32674.0 35 42456.0 36 52440.0 37 76003.0 38 120224.0 39 150700.0 40 39.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 18.599152189360712 34.47372382095863 19.90079705401555 27.026326935665107 2 21.084301501345927 32.531320337304024 20.530704256905526 25.85367390444453 3 20.409238405611934 31.23615131774697 22.150715668394724 26.203894608246376 4 21.509957049394945 30.873153946590033 19.976406921103205 27.64048208291182 5 17.903611421290478 34.8291952099749 18.46560976207395 28.801583606660667 6 20.812316007238945 35.511609265009085 20.302824518599678 23.373250209152292 7 82.3330194590394 5.478739975566811 6.679221638423814 5.509018926969969 8 84.17548490077955 4.171844425697554 5.053259450358272 6.599411223164623 9 75.25072021898858 9.256432964501867 10.395831656031113 5.097015160478442 10 26.027646607882325 45.09183448440021 12.90460905148122 15.975909856236239 11 19.469715797911626 25.663774122522987 35.801972157366535 19.064537922198845 12 23.359948473275765 22.60805035057075 35.823850012426625 18.208151163726864 13 24.35915386957998 24.50319766729558 30.78389229794488 20.353756165179558 14 18.341693591013627 27.456708100407102 33.37615558830427 20.825442720274996 15 16.536508014295865 31.24017684307802 31.326113057754036 20.897202084872077 16 20.31175068346419 28.238535128834314 29.51147624765032 21.938237940051177 17 18.741095712990546 28.161175033341852 31.11888601462491 21.978843239042696 18 18.395075557360236 26.765542903348887 30.760789283001433 24.078592256289447 19 18.559422004571598 31.05255235808273 31.33713949670432 19.050886140641353 20 20.246817209645858 29.77558571393567 29.58796122894038 20.389635847478097 21 20.06496847838643 28.76097830766915 28.535373866289547 22.638679347654868 22 18.81915589984493 25.9028553226196 29.795013249229026 25.482975528306444 23 19.194404869835513 28.444186966399116 27.19592406809089 25.165484095674483 24 16.523556324100294 30.17778820136028 29.357456148027318 23.941199326512113 25 19.340548941636886 28.18357795692338 28.074713750144394 24.40115935129534 26 20.574459967025696 28.823286438880274 27.2963871785268 23.30586641556723 27 17.601171952939858 26.853229346429707 28.708471455524947 26.837127245105485 28 20.618040654305386 26.208270179258392 31.351316346783253 21.822372819652966 29 20.93395688137302 27.838082869814514 26.575293075746387 24.652667173066085 30 22.06197908827102 25.367810499270156 27.876762917560743 24.693447494898084 31 22.27253156536928 28.44121157811094 25.039292627687914 24.246964228831864 32 19.31114510443613 29.71222744568166 25.316178761328352 25.660448688553856 33 22.517038473520795 26.129334878201604 27.239504755370575 24.114121892907026 34 18.18627330866678 28.100792153376013 28.60205756851269 25.11087696944451 35 21.052097298697483 27.365521200516667 27.357995218375997 24.224386282409853 36 21.373789279500972 27.741120216188214 28.03270826842903 22.852382235881784 37 21.63422326613623 29.962160061888078 24.427587800207927 23.976028871767767 38 22.79479972136364 29.96023481064279 26.271103378990958 20.973862089002616 39 22.181869734000287 27.98230169037059 26.09590551566979 23.739923059959324 40 21.732411079645892 30.52485849403347 25.655898094701357 22.086832331619277 41 19.225208889760115 27.18192224085243 30.610269640188044 22.982599229199412 42 21.202266895829904 28.309419379228988 27.29988763533641 23.188426089604693 43 19.989883679820217 24.82278937401331 28.865466943436118 26.321860002730357 44 21.47040188744631 24.69974831715539 27.321590467556018 26.508259327842282 45 24.14125043318153 25.093724731077405 27.959373698267626 22.80565113747344 46 19.477241780052296 26.224722326263578 31.62190165816639 22.676134235517736 47 20.648669651389508 26.364740598648122 28.224183255914898 24.76240649404747 48 20.438642242812687 25.732208053150934 31.004246054110062 22.824903649926316 49 20.863772722340265 24.070891251308296 29.404712314957106 25.660623711394337 50 20.544531061303502 23.475113502312052 27.333316997868224 28.647038438516226 51 20.006160803984923 21.978843239042696 32.59712892532475 25.417867031647628 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1947.0 1 1566.0 2 1185.0 3 828.0 4 471.0 5 417.5 6 364.0 7 377.5 8 391.0 9 495.0 10 599.0 11 599.5 12 600.0 13 641.0 14 682.0 15 771.5 16 861.0 17 996.5 18 1132.0 19 1381.5 20 1631.0 21 1974.0 22 2317.0 23 2419.0 24 2521.0 25 3756.5 26 5492.0 27 5992.0 28 7004.5 29 8017.0 30 9778.0 31 11539.0 32 13644.5 33 15750.0 34 16702.5 35 17655.0 36 19429.5 37 21204.0 38 23306.0 39 25408.0 40 26612.5 41 27817.0 42 30810.5 43 33804.0 44 42160.0 45 50516.0 46 54374.0 47 58232.0 48 62815.5 49 67399.0 50 61584.0 51 55769.0 52 48776.5 53 41784.0 54 35780.5 55 29777.0 56 25882.5 57 21988.0 58 19434.5 59 16881.0 60 15510.0 61 14139.0 62 11953.0 63 9767.0 64 8539.5 65 7312.0 66 5847.0 67 4382.0 68 3455.5 69 2529.0 70 2009.5 71 1490.0 72 1279.0 73 1068.0 74 862.0 75 559.5 76 463.0 77 310.5 78 158.0 79 109.5 80 61.0 81 56.0 82 51.0 83 35.5 84 20.0 85 17.0 86 14.0 87 13.0 88 12.0 89 9.0 90 6.0 91 3.5 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 571354.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 28.752365072367493 #Duplication Level Percentage of deduplicated Percentage of total 1 72.27842180885796 20.781755707028523 2 11.729291836860591 6.744897618675114 3 4.705357043483901 4.0587043053025464 4 2.3251529293871473 2.674145834992959 5 1.4027329835586755 2.0165945421165157 6 0.8687964723888327 1.4987972008625257 7 0.6328997623895055 1.273815551570639 8 0.5042426574027519 1.159853517656372 9 0.3360181572465147 0.8695185055286379 >10 3.9534767357510137 26.957181176540914 >50 1.1056584110889467 21.70664528935201 >100 0.14754356427045193 6.070784436112169 >500 0.004897711677027449 0.787892343308921 >1k 0.004897711677027449 2.3325204292195068 >5k 6.122139596284311E-4 1.0668935417326564 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CTGTCTCTTATACACATCTGACGCTCCGAGAATCGTATGCCGTCTTCTGCT 6061 1.060813436153418 No Hit AATGATACGGCTGTCTCTTATACACATCTGACGCTCCGAGAATCGTATGCC 2655 0.4646856414762126 No Hit AATCTGTCTCTTATACACATCTGACGCTCCGAGAATCGTATGCCGTCTTCT 2210 0.38680047746230883 No Hit AATGATACCTGTCTCTTATACACATCTGACGCTCCGAGAATCGTATGCCGT 2183 0.3820748607693304 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1579 0.276361065118998 No Hit CCCGACGGGATAACAGATAACCAACCATTCCCTTAAAAATCTCACATGCAC 1296 0.2268296012629648 No Hit AAACTGTCTCTTATACACATCTGACGCTCCGAGAATCGTATGCCGTCTTCT 1271 0.22245403025094776 No Hit AAAAACTGTCTCTTATACACATCTGACGCTCCGAGAATCGTATGCCGTCTT 1051 0.18394900534519756 No Hit CCTGTCTCTTATACACATCTGACGCTCCGAGAATCGTATGCCGTCTTCTGC 1006 0.17607297752356685 No Hit AATGACTGTCTCTTATACACATCTGACGCTCCGAGAATCGTATGCCGTCTT 649 0.11358982347196309 No Hit ACCTGTCTCTTATACACATCTGACGCTCCGAGAATCGTATGCCGTCTTCTG 616 0.10781406973610055 No Hit AAAAAACTGTCTCTTATACACATCTGACGCTCCGAGAATCGTATGCCGTCT 578 0.10116320179783461 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.7502284048068274E-4 0.0 0.0 1.2391617106032338 0.0 2 1.7502284048068274E-4 0.0 0.0 1.6765437889644599 0.0 3 1.7502284048068274E-4 0.0 0.0 2.1874354603275727 0.0 4 1.7502284048068274E-4 0.0 0.0 4.580697781060429 0.0 5 1.7502284048068274E-4 0.0 0.0 4.911140903887957 0.0 6 1.7502284048068274E-4 0.0 0.0 6.7921113705338545 0.0 7 1.7502284048068274E-4 0.0 0.0 8.203145510489119 0.0 8 1.7502284048068274E-4 0.0 0.0 9.403977219027084 0.0 9 1.7502284048068274E-4 0.0 0.0 11.329228464314593 0.0 10 1.7502284048068274E-4 0.0 0.0 13.756270193260221 0.0 11 1.7502284048068274E-4 0.0 0.0 16.176661054267583 0.0 12 1.7502284048068274E-4 0.0 0.0 17.28315545178646 0.0 13 1.7502284048068274E-4 0.0 0.0 17.728413557969315 0.0 14 1.7502284048068274E-4 0.0 0.0 18.2268786076583 0.0 15 1.7502284048068274E-4 0.0 0.0 18.6726617823626 0.0 16 1.7502284048068274E-4 0.0 0.0 19.52677324390833 0.0 17 1.7502284048068274E-4 0.0 0.0 20.67509810030209 0.0 18 1.7502284048068274E-4 0.0 0.0 22.177144117307307 0.0 19 1.7502284048068274E-4 0.0 0.0 22.80232570350431 0.0 20 1.7502284048068274E-4 0.0 0.0 23.502067019746075 0.0 21 1.7502284048068274E-4 0.0 0.0 24.16942911049892 0.0 22 1.7502284048068274E-4 0.0 0.0 24.95930718958824 0.0 23 1.7502284048068274E-4 0.0 0.0 25.69965380482153 0.0 24 1.7502284048068274E-4 0.0 0.0 26.221396892294443 0.0 25 1.7502284048068274E-4 0.0 0.0 26.700959475211516 0.0 26 1.7502284048068274E-4 0.0 0.0 27.144117307308605 0.0 27 1.7502284048068274E-4 0.0 0.0 27.64800806505249 0.0 28 1.7502284048068274E-4 0.0 0.0 28.146823160422436 0.0 29 1.7502284048068274E-4 0.0 0.0 28.67591720719554 0.0 30 1.7502284048068274E-4 0.0 0.0 29.38878523647336 0.0 31 1.7502284048068274E-4 0.0 0.0 29.892675994217246 0.0 32 1.7502284048068274E-4 0.0 0.0 30.359986978300668 0.0 33 1.7502284048068274E-4 0.0 0.0 30.84269997234639 0.0 34 1.7502284048068274E-4 0.0 0.0 31.31631177868712 0.0 35 1.7502284048068274E-4 0.0 0.0 31.831228975381286 0.0 36 1.7502284048068274E-4 0.0 0.0 32.29556457117654 0.0 37 1.7502284048068274E-4 0.0 0.0 32.76935140035775 0.0 38 1.7502284048068274E-4 0.0 0.0 33.25959037654414 0.0 39 1.7502284048068274E-4 0.0 0.0 33.72620126926564 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AACGTTA 25 3.8883336E-5 45.000004 1 TCGCACA 25 3.8883336E-5 45.000004 35 CGACGTT 25 3.8883336E-5 45.000004 19 TTCGTAC 25 3.8883336E-5 45.000004 33 CGCGAAG 50 2.1827873E-11 45.000004 1 TCTAGCG 50 2.1827873E-11 45.000004 1 ATCGTTC 25 3.8883336E-5 45.000004 10 TCTCGCG 25 3.8883336E-5 45.000004 1 CTCGCAC 25 3.8883336E-5 45.000004 34 TCGTACA 25 3.8883336E-5 45.000004 34 ATCGCTC 25 3.8883336E-5 45.000004 10 TCAACGA 25 3.8883336E-5 45.000004 37 AATCGAC 25 3.8883336E-5 45.000004 16 AGCGTTC 20 7.0303044E-4 45.0 41 AACGTAC 20 7.0303044E-4 45.0 19 CCTTATC 20 7.0303044E-4 45.0 42 CGACGGA 20 7.0303044E-4 45.0 3 CGTGCAA 20 7.0303044E-4 45.0 26 GACACGC 45 3.8380676E-10 45.0 45 CGGCCGA 20 7.0303044E-4 45.0 17 >>END_MODULE