##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3548526_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 475346 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.626434218442988 31.0 31.0 34.0 30.0 34.0 2 31.845352648386648 31.0 31.0 34.0 30.0 34.0 3 31.957666625994538 33.0 31.0 34.0 30.0 34.0 4 35.58281756867629 37.0 35.0 37.0 33.0 37.0 5 35.35204040846036 37.0 35.0 37.0 33.0 37.0 6 35.342699843903176 37.0 35.0 37.0 33.0 37.0 7 35.17931149099814 37.0 35.0 37.0 32.0 37.0 8 35.5764117085239 37.0 35.0 37.0 33.0 37.0 9 37.20491810176166 39.0 37.0 39.0 34.0 39.0 10 36.770794326658894 39.0 37.0 39.0 32.0 39.0 11 36.81180024655725 39.0 37.0 39.0 32.0 39.0 12 36.693936627214704 39.0 35.0 39.0 32.0 39.0 13 36.759568819344224 39.0 35.0 39.0 32.0 39.0 14 37.78977418554064 39.0 37.0 41.0 33.0 41.0 15 37.88691816066613 40.0 37.0 41.0 33.0 41.0 16 37.67661450816879 39.0 37.0 41.0 32.0 41.0 17 37.73896908778027 39.0 37.0 41.0 33.0 41.0 18 37.584376433166575 39.0 36.0 41.0 32.0 41.0 19 37.5510912051432 39.0 36.0 41.0 32.0 41.0 20 37.6150467238601 39.0 36.0 41.0 32.0 41.0 21 37.64199761857678 39.0 36.0 41.0 32.0 41.0 22 37.64570649589983 39.0 36.0 41.0 32.0 41.0 23 37.54946922873023 39.0 36.0 41.0 32.0 41.0 24 37.41842152873907 39.0 36.0 41.0 32.0 41.0 25 37.3726506586781 39.0 36.0 41.0 32.0 41.0 26 37.28124776478607 39.0 36.0 41.0 32.0 41.0 27 37.16974582725005 39.0 36.0 41.0 31.0 41.0 28 37.14222902895996 39.0 36.0 41.0 31.0 41.0 29 36.93561532020886 39.0 36.0 40.0 31.0 41.0 30 36.86949716627467 39.0 36.0 40.0 30.0 41.0 31 36.75067424570734 39.0 35.0 40.0 30.0 41.0 32 36.64476402452109 39.0 35.0 40.0 30.0 41.0 33 36.47163750194595 39.0 35.0 40.0 30.0 41.0 34 36.43708582800739 39.0 35.0 40.0 30.0 41.0 35 36.3531175186075 39.0 35.0 40.0 30.0 41.0 36 36.14262663407286 38.0 35.0 40.0 30.0 41.0 37 36.08828095744994 38.0 35.0 40.0 30.0 41.0 38 36.03168639264872 38.0 35.0 40.0 29.0 41.0 39 35.86009559352556 38.0 35.0 40.0 28.0 41.0 40 35.66643245130915 38.0 35.0 40.0 27.0 41.0 41 35.726079529437506 38.0 35.0 40.0 28.0 41.0 42 35.68033390414561 38.0 35.0 40.0 27.0 41.0 43 35.54566778725392 38.0 34.0 40.0 26.0 41.0 44 35.475504159075705 38.0 34.0 40.0 26.0 41.0 45 35.246698194578265 38.0 34.0 40.0 26.0 41.0 46 34.914786281992484 38.0 33.0 40.0 25.0 41.0 47 34.91403945757406 38.0 33.0 40.0 25.0 41.0 48 34.918482536930995 38.0 34.0 40.0 26.0 41.0 49 34.75766073554842 38.0 33.0 40.0 24.0 41.0 50 34.5786984638558 38.0 33.0 40.0 24.0 41.0 51 33.10263260866821 36.0 31.0 39.0 20.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 1.0 10 1.0 11 0.0 12 2.0 13 1.0 14 5.0 15 10.0 16 41.0 17 66.0 18 176.0 19 434.0 20 774.0 21 1244.0 22 1843.0 23 2241.0 24 2901.0 25 3349.0 26 4332.0 27 5265.0 28 6648.0 29 8492.0 30 11151.0 31 14036.0 32 17822.0 33 22697.0 34 29679.0 35 37706.0 36 46277.0 37 62834.0 38 91382.0 39 103894.0 40 41.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 18.071888687398232 38.8043656620651 18.96092530493577 24.16282034560089 2 20.10493409011541 37.34185204040846 19.471711132522415 23.081502736953713 3 18.82775914807319 29.84773196787182 27.933968099026814 23.39054078502817 4 24.899757229470744 29.435611112747345 18.66493038754928 26.999701270232627 5 16.6318849848321 39.079954391117205 18.979227762514043 25.308932861536647 6 20.175829816596753 33.46067916843731 24.24192062203111 22.12157039293483 7 75.51615034101475 10.612059426186399 7.490754103326839 6.381036129472005 8 78.08228111733348 4.313068796203186 5.347473208988821 12.257176877474512 9 74.68959452693407 8.335402001910188 10.427982985025643 6.547020486130103 10 28.362918800200276 40.200401391828265 13.820248829273835 17.616430978697622 11 20.517896437542337 26.670257033823784 30.619170036142094 22.192676492491785 12 22.208454473162707 23.977060919835235 35.81370201916078 18.000782587841275 13 25.51194287950251 26.894725105502097 25.888089938697284 21.705242076298106 14 17.874558742473905 28.247423981689128 33.31152465782819 20.566492618008777 15 16.16422563774598 30.145199496787605 28.03431605609388 25.656258809372538 16 18.123430090923243 29.525230042958185 29.017599811505722 23.33374005461285 17 17.332848072772254 27.520585005448662 29.642618219149842 25.50394870262924 18 17.441821325939422 27.441695102094055 28.775039655324754 26.341443916641772 19 18.353578235643088 30.920213907343282 31.29488835500877 19.431319502004854 20 19.925065110466903 32.142691849726305 27.869173191738227 20.063069848068565 21 18.036756383770978 28.402679311490996 28.853929558679365 24.70663474605866 22 17.789778393002152 29.627471357705755 28.18410168592983 24.398648563362265 23 19.75760814227952 27.03714767769162 25.701699393704796 27.50354478632407 24 15.302747893113647 35.10916258893522 25.82518838908921 23.762901128861923 25 19.499059632352015 27.757044342436878 26.647747114733267 26.09614891047784 26 22.030689224270322 30.26784699986957 24.58209388529618 23.119369890563927 27 16.525436208572284 28.44349168815978 28.833312997269356 26.197759105998582 28 23.352252885266733 26.547609530741816 26.22531797890379 23.874819605087662 29 19.509999032283854 29.65103314217433 28.7432733209073 22.09569450463452 30 22.671275239509747 29.176431483593003 24.866518283524 23.28577499337325 31 22.384536737450194 32.04255426573485 23.57356536081086 21.99934363600409 32 24.282943371775506 27.154535853883278 23.76731896344978 24.795201810891434 33 23.51024306505156 28.252893681655046 26.71170052971941 21.525162723573988 34 20.410185422828846 25.60387591354508 26.6517442031699 27.334194460456175 35 26.1998628367547 26.881050855587297 26.157788221632245 20.76129808602576 36 18.959031947255262 29.124258960841154 31.791999932680614 20.124709159222967 37 22.553466317166865 31.127431386821392 23.276518578046307 23.04258371796544 38 22.839994446150804 28.933240208185197 28.62588514471564 19.60088020094836 39 22.770150585047524 24.651727373323855 27.729275096456057 24.84884694517257 40 23.551686560947182 27.190509649812977 26.39256457401556 22.86523921522428 41 21.69261969176137 23.112006832917494 30.708368220201702 24.487005255119428 42 26.758613725580943 25.000946678840258 24.94099035229075 23.29944924328805 43 20.799585985787196 24.593243658303635 30.25270013842548 24.354470217483687 44 21.609732699970127 23.788145897935397 26.74620171411982 27.855919687974655 45 26.13633016791979 26.813941844466978 26.399506885510764 20.650221102102467 46 19.66020540827103 23.56872678007178 34.76330925262861 22.00775855902858 47 21.52095526206174 27.03062611234764 26.058702503018853 25.38971612257177 48 19.873734080017503 22.736070146798333 33.14175358580908 24.24844218737509 49 24.072359923087603 22.27956057271966 28.61473537170819 25.033344132484547 50 21.274398017444135 22.125777854447076 27.15579809233695 29.444026035771838 51 19.535664547508553 20.565440752630714 34.492979850466824 25.405914849393913 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 2102.0 1 1658.0 2 1214.0 3 833.5 4 453.0 5 431.5 6 410.0 7 443.0 8 476.0 9 524.0 10 572.0 11 629.0 12 686.0 13 732.5 14 779.0 15 882.0 16 985.0 17 980.0 18 975.0 19 997.5 20 1020.0 21 1183.5 22 1347.0 23 1612.5 24 1878.0 25 2036.0 26 2742.5 27 3291.0 28 4500.5 29 5710.0 30 6473.0 31 7236.0 32 8420.0 33 9604.0 34 11417.0 35 13230.0 36 14700.5 37 16171.0 38 17142.5 39 18114.0 40 19780.5 41 21447.0 42 23864.0 43 26281.0 44 40510.0 45 54739.0 46 56487.5 47 58236.0 48 57703.0 49 57170.0 50 52144.0 51 47118.0 52 40923.0 53 34728.0 54 29171.5 55 23615.0 56 20320.5 57 17026.0 58 15463.0 59 13900.0 60 12006.5 61 10113.0 62 8923.5 63 7734.0 64 6597.0 65 5460.0 66 4278.5 67 3097.0 68 2661.5 69 2226.0 70 1872.5 71 1519.0 72 1226.0 73 933.0 74 702.0 75 434.0 76 397.0 77 316.0 78 235.0 79 205.5 80 176.0 81 168.0 82 160.0 83 120.5 84 81.0 85 48.5 86 16.0 87 14.5 88 13.0 89 9.0 90 5.0 91 2.5 92 0.0 93 1.5 94 3.0 95 1.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 475346.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 31.284022858953296 #Duplication Level Percentage of deduplicated Percentage of total 1 75.26053203823662 23.544522046611814 2 11.031548800162065 6.902224496678578 3 4.118681936758609 3.865468195749431 4 2.0509767523425033 2.566512144138587 5 1.1562773984652035 1.8086504282438238 6 0.7539132909515974 1.415126437667909 7 0.5438658158487951 1.1910017430651894 8 0.3873930616381224 0.9695370716549541 9 0.3258389301679413 0.9174197285739687 >10 3.4827596075703475 25.091674219509592 >50 0.7499560767337227 16.060043229780433 >100 0.12813997713975478 6.394141674506047 >500 0.0033721046615724937 0.7682000210148656 >1k 0.004046525593886992 2.0997326583740574 >5k 0.002697683729257995 6.405745904430743 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source AATGATACGGCTGTCTCTTATACACATCTGACGCGTAAGTCGTCGTATGCC 9277 1.9516310224552222 No Hit AATGATACCTGTCTCTTATACACATCTGACGCGTAAGTCGTCGTATGCCGT 8131 1.7105434778035369 No Hit AATCTGTCTCTTATACACATCTGACGCGTAAGTCGTCGTATGCCGTCTTCT 7384 1.5533947903211556 No Hit CTGTCTCTTATACACATCTGACGCGTAAGTCGTCGTATGCCGTCTTCTGCT 5569 1.1715676580848478 No Hit AATGACTGTCTCTTATACACATCTGACGCGTAAGTCGTCGTATGCCGTCTT 2101 0.44199383186142305 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1750 0.368152882321509 No Hit AATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCGTAAGTCGTC 1666 0.3504815439700765 No Hit AATGATCTGTCTCTTATACACATCTGACGCGTAAGTCGTCGTATGCCGTCT 1599 0.33638654790405303 No Hit AACTGTCTCTTATACACATCTGACGCGTAAGTCGTCGTATGCCGTCTTCTG 1429 0.3006231250499636 No Hit AATGATACGGCGACTGTCTCTTATACACATCTGACGCGTAAGTCGTCGTAT 1407 0.2959949173864932 No Hit AAACTGTCTCTTATACACATCTGACGCGTAAGTCGTCGTATGCCGTCTTCT 954 0.20069591413412546 No Hit CCTGTCTCTTATACACATCTGACGCGTAAGTCGTCGTATGCCGTCTTCTGC 765 0.1609354028434025 No Hit AAAAACTGTCTCTTATACACATCTGACGCGTAAGTCGTCGTATGCCGTCTT 748 0.15735906055799356 No Hit AATGCTGTCTCTTATACACATCTGACGCGTAAGTCGTCGTATGCCGTCTTC 606 0.12748608382104823 No Hit AATGATCCGGCTGTCTCTTATACACATCTGACGCGTAAGTCGTCGTATGCC 568 0.1194919069477812 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 1.3998224451241832 0.0 2 0.0 0.0 0.0 1.798900169560699 0.0 3 0.0 0.0 0.0 2.522162803515755 0.0 4 0.0 0.0 0.0 6.001523101067433 0.0 5 0.0 0.0 0.0 6.473810655817026 0.0 6 0.0 0.0 0.0 8.506645685458592 0.0 7 0.0 0.0 0.0 10.071190248787198 0.0 8 0.0 0.0 0.0 11.00524670450577 0.0 9 0.0 0.0 0.0 14.227110357508005 0.0 10 0.0 0.0 0.0 16.23764584113467 0.0 11 0.0 0.0 0.0 20.26923546216861 0.0 12 0.0 0.0 0.0 21.354339786176805 0.0 13 0.0 0.0 0.0 21.94590887479857 0.0 14 0.0 0.0 0.0 22.743643577520373 0.0 15 0.0 0.0 0.0 23.23823067828487 0.0 16 0.0 0.0 0.0 24.0774088769023 0.0 17 0.0 0.0 0.0 25.120438585788037 0.0 18 0.0 0.0 0.0 26.89493547857771 0.0 19 0.0 0.0 0.0 27.553823951395405 0.0 20 0.0 0.0 0.0 28.1870469089884 0.0 21 0.0 0.0 0.0 28.880436566206512 0.0 22 0.0 0.0 0.0 29.644932322981575 0.0 23 0.0 0.0 0.0 30.443087771854607 0.0 24 0.0 0.0 0.0 31.012988433688303 0.0 25 0.0 0.0 0.0 31.513676353645554 0.0 26 0.0 0.0 0.0 31.965347346985144 0.0 27 0.0 0.0 0.0 32.483496232218215 0.0 28 0.0 0.0 0.0 32.984815271402304 0.0 29 0.0 0.0 0.0 33.512641318113545 0.0 30 0.0 0.0 0.0 34.23948029435401 0.0 31 0.0 0.0 0.0 34.72901844130381 0.0 32 0.0 0.0 0.0 35.19562592301187 0.0 33 0.0 0.0 0.0 35.6445620663685 0.0 34 0.0 0.0 0.0 36.12484379799136 0.0 35 0.0 0.0 0.0 36.61248858726065 0.0 36 0.0 0.0 0.0 37.089404349673714 0.0 37 0.0 0.0 0.0 37.569265335145346 0.0 38 0.0 0.0 0.0 38.051440424448714 0.0 39 0.0 0.0 0.0 38.52583170995443 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CATATGG 45 3.8380676E-10 45.000004 2 CCGGCGA 45 3.8380676E-10 45.000004 7 CGTAGGT 45 3.8380676E-10 45.000004 1 TCTAACG 45 3.8380676E-10 45.000004 1 GTAACGG 90 0.0 45.000004 2 CTTCGCC 25 3.887341E-5 45.0 36 CTAGACG 20 7.029108E-4 45.0 1 CGGGTCG 20 7.029108E-4 45.0 6 CGGGTAT 50 2.1827873E-11 45.0 6 ACACGTT 25 3.887341E-5 45.0 31 TACTTCG 35 1.209919E-7 45.0 13 CGAGTGG 20 7.029108E-4 45.0 28 ACGTTAG 20 7.029108E-4 45.0 1 CATGACG 40 6.8012014E-9 45.0 1 TAGAACG 20 7.029108E-4 45.0 40 AGCCAAT 25 3.887341E-5 45.0 42 GATCCGA 20 7.029108E-4 45.0 34 ATAGCGG 55 1.8189894E-12 45.0 2 GGATCGA 25 3.887341E-5 45.0 8 CACGATC 35 1.209919E-7 45.0 30 >>END_MODULE