##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3548522_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 240120 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.56728302515409 31.0 31.0 34.0 30.0 34.0 2 31.781734132933533 31.0 31.0 34.0 30.0 34.0 3 31.95757537897718 33.0 31.0 34.0 30.0 34.0 4 35.628444111277695 37.0 35.0 37.0 33.0 37.0 5 35.39837164750958 37.0 35.0 37.0 33.0 37.0 6 35.39107529568549 37.0 35.0 37.0 33.0 37.0 7 35.325462268865564 37.0 35.0 37.0 33.0 37.0 8 35.575949525237384 37.0 35.0 37.0 35.0 37.0 9 37.160490588039316 39.0 37.0 39.0 34.0 39.0 10 36.80122855239047 39.0 37.0 39.0 32.0 39.0 11 36.89538564051308 39.0 37.0 39.0 33.0 39.0 12 36.92778610694653 39.0 37.0 39.0 33.0 39.0 13 36.8424121272697 39.0 37.0 39.0 33.0 39.0 14 37.921789105447274 40.0 37.0 41.0 33.0 41.0 15 37.905134932533734 40.0 37.0 41.0 33.0 41.0 16 37.790388139263705 39.0 37.0 41.0 33.0 41.0 17 37.80586373479927 39.0 37.0 41.0 33.0 41.0 18 37.72244294519407 39.0 37.0 41.0 33.0 41.0 19 37.64164167916042 39.0 36.0 41.0 32.0 41.0 20 37.53906380143262 39.0 36.0 41.0 32.0 41.0 21 37.4499833416625 39.0 36.0 40.0 32.0 41.0 22 37.45857487922705 39.0 36.0 40.0 32.0 41.0 23 37.30655089122106 39.0 36.0 40.0 32.0 41.0 24 37.22619523571547 39.0 36.0 41.0 32.0 41.0 25 37.18009328668999 39.0 36.0 41.0 32.0 41.0 26 37.13731884057971 39.0 36.0 40.0 32.0 41.0 27 37.1047976011994 39.0 36.0 40.0 31.0 41.0 28 36.964034649342 39.0 35.0 40.0 31.0 41.0 29 36.82520406463435 39.0 35.0 40.0 31.0 41.0 30 36.72829002165584 39.0 35.0 40.0 31.0 41.0 31 36.59453606530068 39.0 35.0 40.0 30.0 41.0 32 36.45715475595536 39.0 35.0 40.0 30.0 41.0 33 36.467220556388476 39.0 35.0 40.0 30.0 41.0 34 36.36625853739797 39.0 35.0 40.0 30.0 41.0 35 36.272597034815924 39.0 35.0 40.0 30.0 41.0 36 36.227802765284025 39.0 35.0 40.0 30.0 41.0 37 36.10908712310511 39.0 35.0 40.0 30.0 41.0 38 36.068320006663335 39.0 35.0 40.0 29.0 41.0 39 35.93975512243878 39.0 35.0 40.0 29.0 41.0 40 35.8416291854073 38.0 35.0 40.0 28.0 41.0 41 35.76283108445777 38.0 35.0 40.0 28.0 41.0 42 35.61386390138264 38.0 35.0 40.0 27.0 41.0 43 35.57902298850575 38.0 35.0 40.0 27.0 41.0 44 35.50359820089955 38.0 35.0 40.0 26.0 41.0 45 35.30747959353656 38.0 34.0 40.0 26.0 41.0 46 35.132941862402134 38.0 34.0 40.0 25.0 41.0 47 35.10642178910545 38.0 34.0 40.0 25.0 41.0 48 34.96930701316008 38.0 34.0 40.0 24.0 41.0 49 34.73163834749292 38.0 34.0 40.0 24.0 41.0 50 34.62925620523072 38.0 33.0 40.0 23.0 41.0 51 33.32104780942862 37.0 31.0 39.0 20.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 2.0 13 0.0 14 5.0 15 12.0 16 34.0 17 77.0 18 157.0 19 323.0 20 516.0 21 872.0 22 1232.0 23 1466.0 24 1775.0 25 1878.0 26 2201.0 27 2498.0 28 3068.0 29 3785.0 30 4906.0 31 6289.0 32 8061.0 33 10522.0 34 14644.0 35 19649.0 36 23208.0 37 32690.0 38 48849.0 39 51387.0 40 13.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 16.5992003998001 34.36906546726637 20.620523071797432 28.4112110611361 2 19.366150258204232 35.64134599366983 21.77494586040313 23.217557887722805 3 19.64767616191904 35.749625187406295 18.865150757954353 25.737547892720308 4 18.064301182741964 34.23205064134599 18.926786606696652 28.776861569215395 5 15.292770281525902 38.80851241046144 18.705647176411794 27.193070131600866 6 19.547309678494088 38.56863235049142 19.08837248042645 22.79568549058804 7 73.01765783774779 8.181326003664834 10.54056305180743 8.260453106779943 8 75.67133100116608 8.004747626186907 8.030984507746126 8.292936864900883 9 67.04939197068133 11.888222555388971 15.147426286856572 5.91495918707313 10 22.39130434782609 43.54281192736965 14.738047642845245 19.32783608195902 11 16.75537231384308 29.628519073796433 35.54514409461936 18.070964517741128 12 20.810011660836246 23.814759287023154 35.98450774612694 19.39072130601366 13 23.431617524571045 26.218973846410126 29.743878060969514 20.60553056804931 14 16.74121272696985 29.410294852573713 35.05455605530568 18.793936365150756 15 14.40904547726137 32.69823421622522 31.812427119773446 21.08029318673996 16 15.057054805930367 32.49500249875062 29.080876228552388 23.367066466766616 17 15.701316008662335 32.28427452940197 30.005413959686823 22.008995502248876 18 16.709978344161254 27.509162085623856 28.87056471764118 26.910294852573713 19 16.636265200732968 34.40029985007496 29.970847909378644 18.992587039813426 20 18.434116275195738 30.678827253040147 29.474845910378143 21.412210561385976 21 17.156005330668002 33.11302681992337 27.121022821922374 22.609945027486255 22 15.65550558054306 29.563135099117112 30.588872230551388 24.19248708978844 23 18.399966683325005 28.893053473263368 27.219723471597533 25.487256371814095 24 14.172913543228386 31.667916041979012 26.6191904047976 27.539980009995002 25 16.380976178577377 32.04647676161919 26.682908545727134 24.889638514076296 26 19.592287189738464 31.34057971014493 26.365983674829252 22.701149425287355 27 15.06663334999167 29.21414292853573 27.183908045977013 28.53531567549559 28 18.389555222388807 29.812593703148426 26.866566716641678 24.93128435782109 29 19.155005830418123 31.04489421955689 23.002665333999666 26.797434616025324 30 17.81984007996002 30.361069465267366 26.380976178577377 25.438114276195233 31 16.594202898550726 31.263951357654506 20.602615358987173 31.5392303848076 32 17.385473929701817 33.248375812093954 23.208812260536398 26.157337997667835 33 15.37481259370315 27.95977011494253 25.784607696151923 30.880809595202397 34 13.906380143261702 29.68182575378977 24.281609195402297 32.13018490754623 35 16.25312343828086 31.08070964517741 23.053889721805763 29.612277194735963 36 15.226136931534231 25.189905047476262 31.17649508579044 28.407462935199067 37 15.660503081792438 30.433533233383308 23.56071964017991 30.345244044644343 38 19.0184074629352 28.90429785107446 27.842745294019654 24.23454939197068 39 17.384641012826922 25.451857404631017 26.660003331667497 30.50349825087456 40 20.069548559053807 28.588205897051473 21.79743461602532 29.544810927869396 41 16.958604031317677 26.35640513076795 28.361652507079793 28.323338330834584 42 20.892470431450942 28.635265700483092 26.23563218390805 24.23663168415792 43 16.635015825420624 25.215309012160585 29.596035315675493 28.553639846743295 44 20.175745460603032 23.009328668998837 28.025570548059303 28.78935532233883 45 21.833250041645844 23.726886556721638 27.742378810594705 26.697484591037814 46 16.61294352823588 24.29576878227553 32.06854905880393 27.022738630684657 47 18.27461269365317 23.409128768948857 26.60169915042479 31.71455938697318 48 18.50991171081126 22.146426786606696 33.63193403298351 25.711727469598532 49 19.078377477927702 21.96818257537898 31.19023821422622 27.763201732467103 50 17.188072630351492 19.578544061302683 28.96343494919207 34.26994835915376 51 17.69990004997501 19.728052640346494 34.47442945194069 28.0976178577378 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 2505.0 1 2035.0 2 1565.0 3 1099.0 4 633.0 5 560.0 6 487.0 7 510.0 8 533.0 9 559.5 10 586.0 11 639.0 12 692.0 13 751.5 14 811.0 15 871.5 16 932.0 17 1028.0 18 1124.0 19 1193.5 20 1263.0 21 1070.0 22 877.0 23 1215.0 24 1553.0 25 1656.5 26 1931.5 27 2103.0 28 2396.5 29 2690.0 30 3395.5 31 4101.0 32 4234.0 33 4367.0 34 4669.0 35 4971.0 36 6001.5 37 7032.0 38 7484.0 39 7936.0 40 8420.0 41 8904.0 42 12291.0 43 15678.0 44 19472.0 45 23266.0 46 25126.0 47 26986.0 48 30466.0 49 33946.0 50 29991.0 51 26036.0 52 21610.0 53 17184.0 54 14722.0 55 12260.0 56 9624.5 57 6989.0 58 6287.5 59 5586.0 60 5007.0 61 4428.0 62 3918.5 63 3409.0 64 3055.0 65 2701.0 66 2254.5 67 1808.0 68 1412.0 69 1016.0 70 758.0 71 500.0 72 402.5 73 305.0 74 261.0 75 219.5 76 222.0 77 157.5 78 93.0 79 63.0 80 33.0 81 19.5 82 6.0 83 8.5 84 11.0 85 9.0 86 7.0 87 4.0 88 1.0 89 1.5 90 2.0 91 1.5 92 1.0 93 2.0 94 3.0 95 2.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 240120.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 34.11377644511078 #Duplication Level Percentage of deduplicated Percentage of total 1 75.26796396220426 25.676744960852904 2 11.101887345264545 7.574546060303182 3 4.342359059501429 4.444027986006996 4 2.2584661962546084 3.081792437114776 5 1.2525331445174208 2.136431784107946 6 0.7764240544961789 1.5892053973013494 7 0.5151744512537539 1.2302182242212227 8 0.4004199526332495 1.0927869398634016 9 0.3308347779378372 1.0157421289355322 >10 2.971409038747955 24.122105613859738 >50 0.6775398588763826 15.30568049308679 >100 0.09522181800424835 6.4680159920039975 >500 0.0036623776155480137 0.9170414792603698 >1k 0.006103962692580022 5.345660503081792 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CTGTCTCTTATACACATCTGACGCACTCACCATCGTATGCCGTCTTCTGCT 4727 1.968599033816425 No Hit AAACTGTCTCTTATACACATCTGACGCACTCACCATCGTATGCCGTCTTCT 2398 0.9986673330001666 No Hit AAAAACTGTCTCTTATACACATCTGACGCACTCACCATCGTATGCCGTCTT 2320 0.966183574879227 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 2126 0.8853906380143263 No Hit AAAAAACTGTCTCTTATACACATCTGACGCACTCACCATCGTATGCCGTCT 1265 0.5268199233716475 No Hit CCTGTCTCTTATACACATCTGACGCACTCACCATCGTATGCCGTCTTCTGC 949 0.3952190571380976 No Hit GAAAAACTGTCTCTTATACACATCTGACGCACTCACCATCGTATGCCGTCT 671 0.2794436115275696 No Hit CAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 582 0.24237881059470265 No Hit GAAAACTGTCTCTTATACACATCTGACGCACTCACCATCGTATGCCGTCTT 471 0.19615192403798098 No Hit CAAAAACTGTCTCTTATACACATCTGACGCACTCACCATCGTATGCCGTCT 454 0.189072130601366 No Hit AACCTGTCTCTTATACACATCTGACGCACTCACCATCGTATGCCGTCTTCT 439 0.18282525403964686 No Hit AATCTGTCTCTTATACACATCTGACGCACTCACCATCGTATGCCGTCTTCT 436 0.18157587872730302 No Hit ACCTGTCTCTTATACACATCTGACGCACTCACCATCGTATGCCGTCTTCTG 426 0.17741129435282357 No Hit TAAAACTGTCTCTTATACACATCTGACGCACTCACCATCGTATGCCGTCTT 410 0.1707479593536565 No Hit GCTGTCTCTTATACACATCTGACGCACTCACCATCGTATGCCGTCTTCTGC 362 0.15075795435615524 No Hit TACCTGTCTCTTATACACATCTGACGCACTCACCATCGTATGCCGTCTTCT 338 0.14076295185740462 No Hit CAACTGTCTCTTATACACATCTGACGCACTCACCATCGTATGCCGTCTTCT 332 0.138264201232717 No Hit GAAACTGTCTCTTATACACATCTGACGCACTCACCATCGTATGCCGTCTTC 316 0.13160086623354988 No Hit TGAGAGGGGTAAAGGCCCAAGGAAATTGTGTATCATAGAAGAAAACTCTTA 302 0.1257704481092787 No Hit GAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 301 0.12535398967183076 No Hit TAAAAACTGTCTCTTATACACATCTGACGCACTCACCATCGTATGCCGTCT 296 0.12327169748459103 No Hit AATGATACGGCTGTCTCTTATACACATCTGACGCACTCACCATCGTATGCC 293 0.1220223221722472 No Hit CTCCCTGGGAACTGTCTCTTATACACATCTGACGCACTCACCATCGTATGC 292 0.12160586373479926 No Hit TCTGTCTCTTATACACATCTGACGCACTCACCATCGTATGCCGTCTTCTGC 290 0.12077294685990338 No Hit CTCCCTGGGAATGATACCTGTCTCTTATACACATCTGACGCACTCACCATC 284 0.11827419623521573 No Hit GAACTGTCTCTTATACACATCTGACGCACTCACCATCGTATGCCGTCTTCT 279 0.11619190404797601 No Hit TCAAAAGGGGTGTAAACACTGTACCAAGTTTTGCAGATTCTTTCAAATCCA 279 0.11619190404797601 No Hit AGCCTGTCTCTTATACACATCTGACGCACTCACCATCGTATGCCGTCTTCT 266 0.11077794436115276 No Hit AAAACTGTCTCTTATACACATCTGACGCACTCACCATCGTATGCCGTCTTC 256 0.10661335998667333 No Hit AATGATACCTGTCTCTTATACACATCTGACGCACTCACCATCGTATGCCGT 256 0.10661335998667333 No Hit CACCTGTCTCTTATACACATCTGACGCACTCACCATCGTATGCCGTCTTCT 247 0.10286523404964185 No Hit AACTGTCTCTTATACACATCTGACGCACTCACCATCGTATGCCGTCTTCTG 241 0.10036648342495419 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 2.2184740962851905 0.0 2 0.0 0.0 0.0 3.0922038980509745 0.0 3 0.0 0.0 0.0 3.8988838913876394 0.0 4 0.0 0.0 0.0 7.913959686823255 0.0 5 0.0 0.0 0.0 8.590704647676162 0.0 6 0.0 0.0 0.0 12.104780942861902 0.0 7 0.0 0.0 0.0 14.99791770781276 0.0 8 0.0 0.0 0.0 16.812010661336 0.0 9 0.0 0.0 0.0 19.11544227886057 0.0 10 0.0 0.0 0.0 22.616608362485422 0.0 11 0.0 0.0 0.0 25.468099283691487 0.0 12 0.0 0.0 0.0 27.187656171914043 0.0 13 0.0 0.0 0.0 27.878977178077626 0.0 14 0.0 0.0 0.0 28.47326336831584 0.0 15 0.0 0.0 0.0 29.106696651674163 0.0 16 0.0 0.0 0.0 30.28735632183908 0.0 17 0.0 0.0 0.0 31.791604197901048 0.0 18 0.0 0.0 0.0 34.0896218557388 0.0 19 0.0 0.0 0.0 34.893803098450775 0.0 20 0.0 0.0 0.0 35.88997168082626 0.0 21 0.0 0.0 0.0 36.76411794102948 0.0 22 0.0 0.0 0.0 37.65950358154256 0.0 23 0.0 0.0 0.0 38.44494419456938 0.0 24 0.0 0.0 0.0 39.00049975012494 0.0 25 0.0 0.0 0.0 39.436531734132934 0.0 26 0.0 0.0 0.0 39.93295019157088 0.0 27 0.0 0.0 0.0 40.48350824587706 0.0 28 0.0 0.0 0.0 40.98992170581376 0.0 29 4.164584374479427E-4 0.0 0.0 41.542978510744625 0.0 30 4.164584374479427E-4 0.0 0.0 42.26178577377978 0.0 31 4.164584374479427E-4 0.0 0.0 42.77402965184075 0.0 32 4.164584374479427E-4 0.0 0.0 43.220056638347494 0.0 33 4.164584374479427E-4 0.0 0.0 43.65608862235549 0.0 34 4.164584374479427E-4 0.0 0.0 44.07712810261536 0.0 35 4.164584374479427E-4 0.0 0.0 44.496501749125436 0.0 36 4.164584374479427E-4 0.0 0.0 44.925453939696816 0.0 37 4.164584374479427E-4 0.0 0.0 45.355239047143094 0.0 38 4.164584374479427E-4 0.0 0.0 45.76086956521739 0.0 39 4.164584374479427E-4 0.0 0.0 46.15150757954356 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCCGCGG 35 1.206572E-7 45.000004 2 TACCACG 35 1.206572E-7 45.000004 1 GCGAAGG 35 1.206572E-7 45.000004 2 TAAACGG 35 1.206572E-7 45.000004 2 GAACGGG 65 0.0 45.000004 3 ACCACGG 95 0.0 45.000004 2 ATTGGGT 35 1.206572E-7 45.000004 10 CTCGAGG 35 1.206572E-7 45.000004 2 GGGTTAC 35 1.206572E-7 45.000004 7 CCACAAA 20 7.022129E-4 45.0 31 TCGCCCA 25 3.8815604E-5 45.0 15 TATCAGG 45 3.8198777E-10 45.0 2 CGGGTGA 45 3.8198777E-10 45.0 6 CTAGACG 20 7.022129E-4 45.0 1 CGTGGGA 25 3.8815604E-5 45.0 4 AAGTACT 25 3.8815604E-5 45.0 24 AAGTACG 25 3.8815604E-5 45.0 1 GGTACTT 20 7.022129E-4 45.0 9 GATACCA 25 3.8815604E-5 45.0 9 GATACAA 20 7.022129E-4 45.0 33 >>END_MODULE