##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3548521_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 240797 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.543370556942154 31.0 31.0 34.0 30.0 34.0 2 31.74477256776455 31.0 31.0 34.0 30.0 34.0 3 31.927258229961335 33.0 31.0 34.0 30.0 34.0 4 35.572062774868456 37.0 35.0 37.0 33.0 37.0 5 35.369257092073404 37.0 35.0 37.0 33.0 37.0 6 35.374713970689 37.0 35.0 37.0 33.0 37.0 7 35.338392920177576 37.0 35.0 37.0 33.0 37.0 8 35.60730407770861 37.0 35.0 37.0 35.0 37.0 9 37.163955531007446 39.0 37.0 39.0 34.0 39.0 10 36.7933736715989 39.0 37.0 39.0 32.0 39.0 11 36.900127493282724 39.0 37.0 39.0 33.0 39.0 12 36.9419303396637 39.0 37.0 39.0 33.0 39.0 13 36.838473901252925 39.0 37.0 39.0 33.0 39.0 14 37.90854537224301 40.0 37.0 41.0 33.0 41.0 15 37.88727849599455 39.0 37.0 41.0 33.0 41.0 16 37.81122688405586 39.0 37.0 41.0 33.0 41.0 17 37.79587370274547 39.0 37.0 41.0 33.0 41.0 18 37.70035756259422 39.0 37.0 41.0 33.0 41.0 19 37.5969758759453 39.0 36.0 41.0 32.0 41.0 20 37.496737916170055 39.0 36.0 41.0 32.0 41.0 21 37.42412488527681 39.0 36.0 40.0 32.0 41.0 22 37.42565314351923 39.0 36.0 40.0 32.0 41.0 23 37.29151941261727 39.0 36.0 40.0 32.0 41.0 24 37.23288080831572 39.0 36.0 40.0 32.0 41.0 25 37.18839105138353 39.0 36.0 41.0 32.0 41.0 26 37.114291291004456 39.0 36.0 40.0 31.0 41.0 27 37.054523104523724 39.0 36.0 40.0 31.0 41.0 28 36.906556144802465 39.0 35.0 40.0 31.0 41.0 29 36.77979792107045 39.0 35.0 40.0 31.0 41.0 30 36.722712492265266 39.0 35.0 40.0 31.0 41.0 31 36.58814270941914 39.0 35.0 40.0 30.0 41.0 32 36.45566182302936 39.0 35.0 40.0 30.0 41.0 33 36.450620231979634 39.0 35.0 40.0 30.0 41.0 34 36.34832659875331 39.0 35.0 40.0 30.0 41.0 35 36.249974044527136 39.0 35.0 40.0 30.0 41.0 36 36.210642159163115 39.0 35.0 40.0 30.0 41.0 37 36.04619658882793 39.0 35.0 40.0 29.0 41.0 38 35.989119465774074 39.0 35.0 40.0 29.0 41.0 39 35.88654758987861 38.0 35.0 40.0 29.0 41.0 40 35.81394701761234 38.0 35.0 40.0 28.0 41.0 41 35.78777144233524 38.0 35.0 40.0 28.0 41.0 42 35.607424511102714 38.0 35.0 40.0 27.0 41.0 43 35.563794399431885 38.0 35.0 40.0 27.0 41.0 44 35.562237071059855 38.0 35.0 40.0 27.0 41.0 45 35.368571867589715 38.0 34.0 40.0 26.0 41.0 46 35.16287993621183 38.0 34.0 40.0 25.0 41.0 47 35.0844362678937 38.0 34.0 40.0 25.0 41.0 48 34.9901742961914 38.0 34.0 40.0 24.0 41.0 49 34.78701977184101 38.0 34.0 40.0 24.0 41.0 50 34.64143656274788 38.0 33.0 40.0 23.0 41.0 51 33.3730735848038 37.0 31.0 40.0 20.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 0.0 11 1.0 12 1.0 13 1.0 14 5.0 15 6.0 16 33.0 17 69.0 18 165.0 19 336.0 20 557.0 21 872.0 22 1189.0 23 1529.0 24 1783.0 25 1923.0 26 2105.0 27 2498.0 28 3108.0 29 3853.0 30 4932.0 31 6366.0 32 8124.0 33 10641.0 34 14602.0 35 19882.0 36 23253.0 37 32696.0 38 49124.0 39 51132.0 40 10.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 16.475288313392607 34.446027151501056 20.57334601344701 28.505338521659322 2 19.256053854491544 35.8285194582989 21.827099174823605 23.088327512385952 3 19.738202718472404 35.78283782605265 18.743588998201805 25.735370457273138 4 18.32041096857519 34.06562374115957 18.83412168756255 28.77984360270269 5 15.15052097825139 38.847660062210075 18.615680427912306 27.386138531626226 6 19.540110549550036 38.630464665257456 18.96535255837905 22.864072226813455 7 73.07939882971965 8.19819183793818 10.455695046034627 8.266714286307554 8 75.80783813751833 7.989717479868935 8.037475549944558 8.16496883266818 9 67.32019086616528 11.817007686972843 15.085320830409016 5.777480616452863 10 22.49737330614584 43.56325037272059 14.54627756990328 19.39309875123029 11 16.687915547120603 29.499536954364046 35.71306951498565 18.099477983529695 12 20.739461039797007 23.88941722695881 36.06980153407227 19.30132019917192 13 23.428863316403444 25.992848748115634 29.942648787152663 20.63563914832826 14 16.687084971988853 29.26489947964468 35.03615078260942 19.011864765757046 15 14.385976569475535 32.41817796733348 32.07639630061836 21.11944916257262 16 14.803340573179899 32.590937594737476 29.08341881335731 23.522303018725317 17 15.606506725582129 32.227976262162734 30.00120433394104 22.1643126783141 18 16.805026640697353 27.41396279853985 28.70675299110869 27.074257569654108 19 16.70909521298023 34.6079893021923 29.800620439623415 18.88229504520405 20 18.49773875920381 30.544400470105526 29.267391205039928 21.690469565650737 21 17.03883354028497 33.27408564060184 27.2187776425786 22.46830317653459 22 15.54670531609613 29.30975053675918 30.55229093385715 24.59125321328754 23 18.344912934961815 29.023202116305434 27.23995730843823 25.39192764029452 24 13.956153938794918 31.570991332948502 26.758639019589115 27.714215708667467 25 16.429191393580485 32.10795815562486 26.537290746977742 24.92555970381691 26 19.572502979688284 31.111683285090763 26.537706034543618 22.77810770067733 27 15.20700008721039 29.303105935705183 27.04228042708173 28.4476135500027 28 18.195824698812693 29.5485408871373 27.227083393896102 25.028551020153905 29 19.21826268599692 31.089673044099385 22.86531808951108 26.826746180392615 30 18.007284143905448 30.33924841256328 26.345012603977626 25.30845483955365 31 16.755192132792352 31.283197049797135 20.398094660647764 31.56351615676275 32 17.366495429760338 33.217606531642836 23.296386582889323 26.119511455707507 33 15.391387766458884 27.895696374954838 25.82050440827751 30.892411450308764 34 14.051254791380291 29.699290273549924 24.262760748680424 31.986694186389364 35 16.35693135711824 31.043576124287263 22.933840537880457 29.665651980714046 36 15.266801496696386 25.349983596141147 31.138676976872638 28.24453793028983 37 15.670876298292752 30.32346748506003 23.46831563516157 30.53734058148565 38 19.0043895895713 29.011158776895062 27.88323774797859 24.101213885555055 39 17.316245634289466 25.40770856779777 26.531476721055498 30.74456907685727 40 20.0720939214359 28.612898001220945 21.79429145711948 29.520716620223673 41 16.97986270593072 26.301407409560753 28.309738078132202 28.408991806376328 42 20.965377475633 28.694709651698318 26.137784108606006 24.202128764062675 43 16.440819445424985 25.33295680594027 29.659837954791797 28.566385793842947 44 20.22201273271677 23.068808996789826 28.00408642964821 28.705091840845192 45 21.974941548275105 23.54016038405794 27.96421882332421 26.520679244342745 46 16.711171650809604 24.42057002371292 31.78652557963762 27.081732745839858 47 18.203299874998443 23.57089166393269 26.65938529134499 31.566423169723873 48 18.580380984812933 22.233665701815223 33.40780823681358 25.77814507655826 49 18.986116936672797 22.153099914035472 31.060187626922264 27.800595522369463 50 17.041740553246097 19.605310697392408 28.928931838851813 34.42401691050968 51 17.69789490732858 19.81336976789578 34.53282225276893 27.95591307200671 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 2654.0 1 2103.0 2 1552.0 3 1090.0 4 628.0 5 558.5 6 489.0 7 506.5 8 524.0 9 559.0 10 594.0 11 657.5 12 721.0 13 748.0 14 775.0 15 843.0 16 911.0 17 960.5 18 1010.0 19 1108.0 20 1206.0 21 1042.0 22 878.0 23 1154.0 24 1430.0 25 1556.5 26 1902.0 27 2121.0 28 2442.5 29 2764.0 30 3450.0 31 4136.0 32 4259.0 33 4382.0 34 4661.0 35 4940.0 36 5948.5 37 6957.0 38 7535.0 39 8113.0 40 8453.5 41 8794.0 42 12243.0 43 15692.0 44 19617.0 45 23542.0 46 25312.5 47 27083.0 48 30629.0 49 34175.0 50 30063.5 51 25952.0 52 21608.0 53 17264.0 54 14760.5 55 12257.0 56 9636.5 57 7016.0 58 6258.0 59 5500.0 60 5043.0 61 4586.0 62 3981.5 63 3377.0 64 3091.0 65 2805.0 66 2350.0 67 1895.0 68 1435.5 69 976.0 70 782.5 71 589.0 72 427.5 73 266.0 74 233.0 75 211.0 76 222.0 77 154.5 78 87.0 79 54.5 80 22.0 81 12.5 82 3.0 83 9.0 84 15.0 85 9.0 86 3.0 87 2.0 88 1.0 89 1.5 90 2.0 91 2.5 92 3.0 93 2.5 94 2.0 95 1.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 240797.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 34.015373945688694 #Duplication Level Percentage of deduplicated Percentage of total 1 75.24783903892171 25.595833835139143 2 11.066074131952924 7.528332994181822 3 4.354885969624457 4.443992242428269 4 2.207354592957953 3.0033596764079284 5 1.35639986326122 2.3069224284355703 6 0.7801435757190994 1.592212527564712 7 0.5164330712506715 1.2296664825558457 8 0.42364604190066907 1.1528382828689727 9 0.31376666503882406 0.9605601398688521 >10 2.913024368804024 23.38110524632782 >50 0.709332421741466 15.873951918005623 >100 0.10133320310592372 6.597673559055968 >500 0.003662645895394833 0.8849778028796039 >1k 0.006104409825658056 5.44857286427987 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CTGTCTCTTATACACATCTGACGCACTCACCATCGTATGCCGTCTTCTGCT 4885 2.028679759299327 No Hit AAACTGTCTCTTATACACATCTGACGCACTCACCATCGTATGCCGTCTTCT 2469 1.0253450001453506 No Hit AAAAACTGTCTCTTATACACATCTGACGCACTCACCATCGTATGCCGTCTT 2267 0.9414569118386026 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 2259 0.9381346113116027 No Hit AAAAAACTGTCTCTTATACACATCTGACGCACTCACCATCGTATGCCGTCT 1240 0.5149565816849878 No Hit CCTGTCTCTTATACACATCTGACGCACTCACCATCGTATGCCGTCTTCTGC 905 0.3758352471168661 No Hit GAAAAACTGTCTCTTATACACATCTGACGCACTCACCATCGTATGCCGTCT 673 0.27948853183386835 No Hit CAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 553 0.22965402392886952 No Hit GAAAACTGTCTCTTATACACATCTGACGCACTCACCATCGTATGCCGTCTT 478 0.19850745648824528 No Hit CAAAAACTGTCTCTTATACACATCTGACGCACTCACCATCGTATGCCGTCT 450 0.18687940464374556 No Hit ACCTGTCTCTTATACACATCTGACGCACTCACCATCGTATGCCGTCTTCTG 402 0.16694560148174603 No Hit AATCTGTCTCTTATACACATCTGACGCACTCACCATCGTATGCCGTCTTCT 397 0.1648691636523711 No Hit AACCTGTCTCTTATACACATCTGACGCACTCACCATCGTATGCCGTCTTCT 378 0.15697869990074628 No Hit TAAAACTGTCTCTTATACACATCTGACGCACTCACCATCGTATGCCGTCTT 377 0.15656341233487128 No Hit GAAACTGTCTCTTATACACATCTGACGCACTCACCATCGTATGCCGTCTTC 341 0.14161305996337165 No Hit GCTGTCTCTTATACACATCTGACGCACTCACCATCGTATGCCGTCTTCTGC 335 0.1391213345681217 No Hit CTCCCTGGGAATGATACCTGTCTCTTATACACATCTGACGCACTCACCATC 334 0.1387060470022467 No Hit CAACTGTCTCTTATACACATCTGACGCACTCACCATCGTATGCCGTCTTCT 334 0.1387060470022467 No Hit AATGATACGGCTGTCTCTTATACACATCTGACGCACTCACCATCGTATGCC 329 0.13662960917287176 No Hit GAACTGTCTCTTATACACATCTGACGCACTCACCATCGTATGCCGTCTTCT 317 0.13164615838237187 No Hit TCTGTCTCTTATACACATCTGACGCACTCACCATCGTATGCCGTCTTCTGC 316 0.13123087081649687 No Hit GAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 307 0.12749328272362198 No Hit TGAGAGGGGTAAAGGCCCAAGGAAATTGTGTATCATAGAAGAAAACTCTTA 306 0.12707799515774698 No Hit CTCCCTGGGAACTGTCTCTTATACACATCTGACGCACTCACCATCGTATGC 295 0.1225098319331221 No Hit TACCTGTCTCTTATACACATCTGACGCACTCACCATCGTATGCCGTCTTCT 292 0.12126396923549712 No Hit TAAAAACTGTCTCTTATACACATCTGACGCACTCACCATCGTATGCCGTCT 283 0.11752638114262222 No Hit AATGATACCTGTCTCTTATACACATCTGACGCACTCACCATCGTATGCCGT 282 0.11711109357674722 No Hit AACTGTCTCTTATACACATCTGACGCACTCACCATCGTATGCCGTCTTCTG 270 0.11212764278624733 No Hit TCAAAAGGGGTGTAAACACTGTACCAAGTTTTGCAGATTCTTTCAAATCCA 261 0.10839005469337243 No Hit AGCCTGTCTCTTATACACATCTGACGCACTCACCATCGTATGCCGTCTTCT 249 0.10340660390287255 No Hit CACCTGTCTCTTATACACATCTGACGCACTCACCATCGTATGCCGTCTTCT 248 0.10299131633699754 No Hit AAAACTGTCTCTTATACACATCTGACGCACTCACCATCGTATGCCGTCTTC 246 0.10216074120524758 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 2.2541809075694466 0.0 2 0.0 0.0 0.0 3.0934770782028016 0.0 3 0.0 0.0 0.0 3.8912444922486578 0.0 4 0.0 0.0 0.0 7.843536256680939 0.0 5 0.0 0.0 0.0 8.505919924251549 0.0 6 0.0 0.0 0.0 12.026727907739714 0.0 7 0.0 0.0 0.0 14.938724319655146 0.0 8 0.0 0.0 0.0 16.778032948915477 0.0 9 0.0 0.0 0.0 18.9545550816663 0.0 10 0.0 0.0 0.0 22.482007666208467 0.0 11 0.0 0.0 0.0 25.327142780018022 0.0 12 0.0 0.0 0.0 27.113294600846356 0.0 13 0.0 0.0 0.0 27.787306320261465 0.0 14 0.0 0.0 0.0 28.400686055058827 0.0 15 0.0 0.0 0.0 29.045627644862684 0.0 16 0.0 0.0 0.0 30.22296789411828 0.0 17 0.0 0.0 0.0 31.666922760665624 0.0 18 0.0 0.0 0.0 34.00499175654182 0.0 19 0.0 0.0 0.0 34.8272611369743 0.0 20 0.0 0.0 0.0 35.848037973895025 0.0 21 0.0 0.0 0.0 36.700208059070505 0.0 22 0.0 0.0 0.0 37.60221265215098 0.0 23 0.0 0.0 0.0 38.41991386935884 0.0 24 0.0 0.0 0.0 38.97764507032895 0.0 25 0.0 0.0 0.0 39.46270094727094 0.0 26 0.0 0.0 0.0 39.97018235277017 0.0 27 0.0 0.0 0.0 40.53497344236016 0.0 28 0.0 0.0 0.0 41.0457771483864 0.0 29 0.0 0.0 0.0 41.57983695810164 0.0 30 0.0 0.0 0.0 42.26340029153187 0.0 31 0.0 0.0 0.0 42.73184466583886 0.0 32 0.0 0.0 0.0 43.17038833540285 0.0 33 0.0 0.0 0.0 43.606855567137465 0.0 34 0.0 0.0 0.0 44.028787734066455 0.0 35 0.0 0.0 0.0 44.44739760046844 0.0 36 0.0 0.0 0.0 44.86476160417281 0.0 37 0.0 0.0 0.0 45.27049755603267 0.0 38 0.0 0.0 0.0 45.69741317375217 0.0 39 0.0 0.0 0.0 46.078647159225405 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TATCATA 35 1.2065902E-7 45.000004 31 GGCCCTA 35 1.2065902E-7 45.000004 40 CATAACG 35 1.2065902E-7 45.000004 1 ACGCGAG 20 7.022168E-4 45.0 1 TATTTGC 20 7.022168E-4 45.0 19 TCGCCAC 20 7.022168E-4 45.0 16 GTGTTCG 20 7.022168E-4 45.0 9 CGGGTTG 45 3.8198777E-10 45.0 6 GTGTTAC 20 7.022168E-4 45.0 39 CGGGTTA 20 7.022168E-4 45.0 6 CGTGGTA 20 7.022168E-4 45.0 27 GAGGATA 20 7.022168E-4 45.0 7 GAGTGTC 25 3.8815924E-5 45.0 9 CGGGTGA 25 3.8815924E-5 45.0 6 CTAGAAC 20 7.022168E-4 45.0 20 CTAGAAA 25 3.8815924E-5 45.0 43 CGTGGAC 20 7.022168E-4 45.0 20 CGGCGGA 25 3.8815924E-5 45.0 25 TCGTTAA 20 7.022168E-4 45.0 17 ACCGGTA 25 3.8815924E-5 45.0 10 >>END_MODULE