##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3548465_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 241552 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.44734053123137 31.0 31.0 34.0 30.0 34.0 2 31.64601410876333 31.0 31.0 34.0 30.0 34.0 3 31.855149201828176 33.0 31.0 34.0 30.0 34.0 4 35.57157051069749 37.0 35.0 37.0 33.0 37.0 5 35.346952209048155 37.0 35.0 37.0 33.0 37.0 6 35.36155775981983 37.0 35.0 37.0 33.0 37.0 7 35.45509869510499 37.0 35.0 37.0 33.0 37.0 8 35.497255249387294 37.0 35.0 37.0 33.0 37.0 9 37.02967476982182 39.0 37.0 39.0 33.0 39.0 10 36.66584006756309 38.0 35.0 39.0 32.0 39.0 11 36.78024607537922 39.0 37.0 39.0 32.0 39.0 12 36.90284907597536 39.0 37.0 39.0 33.0 39.0 13 36.8367225276545 39.0 37.0 39.0 33.0 39.0 14 37.88304381665232 39.0 37.0 41.0 33.0 41.0 15 37.934908425515005 40.0 37.0 41.0 33.0 41.0 16 37.79847817447175 39.0 37.0 41.0 33.0 41.0 17 37.73276975558058 39.0 37.0 41.0 33.0 41.0 18 37.64753759024972 39.0 37.0 41.0 33.0 41.0 19 37.58432966814599 39.0 36.0 41.0 32.0 41.0 20 37.4675059614493 39.0 36.0 40.0 32.0 41.0 21 37.37793104590316 39.0 36.0 40.0 32.0 41.0 22 37.3243152613102 39.0 36.0 40.0 32.0 41.0 23 37.143422534278336 39.0 36.0 40.0 31.0 41.0 24 37.07317679009075 39.0 35.0 40.0 31.0 41.0 25 37.04217725375902 39.0 35.0 40.0 31.0 41.0 26 37.05811585083129 39.0 35.0 40.0 31.0 41.0 27 37.00267023249652 39.0 36.0 40.0 31.0 41.0 28 36.76099556203219 39.0 35.0 40.0 31.0 41.0 29 36.55917152414387 39.0 35.0 40.0 30.0 41.0 30 36.5841019739021 39.0 35.0 40.0 30.0 41.0 31 36.48585397761145 39.0 35.0 40.0 30.0 41.0 32 36.48625140756442 39.0 35.0 40.0 30.0 41.0 33 36.32681575809764 39.0 35.0 40.0 30.0 41.0 34 36.40786248923627 39.0 35.0 40.0 30.0 41.0 35 36.28269275352719 39.0 35.0 40.0 30.0 41.0 36 36.18285089752931 39.0 35.0 40.0 29.0 41.0 37 36.109053123137045 39.0 35.0 40.0 29.0 41.0 38 36.04480194740677 39.0 35.0 40.0 29.0 41.0 39 35.93758693780221 39.0 35.0 40.0 28.0 41.0 40 35.844857422004374 39.0 35.0 40.0 28.0 41.0 41 35.85381615552759 39.0 35.0 40.0 28.0 41.0 42 35.721674836060146 38.0 35.0 40.0 27.0 41.0 43 35.643799264754584 38.0 35.0 40.0 27.0 41.0 44 35.590477412731005 38.0 35.0 40.0 27.0 41.0 45 35.421681459892696 38.0 35.0 40.0 26.0 41.0 46 35.23643770285487 38.0 34.0 40.0 26.0 41.0 47 35.11162813804067 38.0 34.0 40.0 25.0 41.0 48 35.10749238259257 38.0 34.0 40.0 25.0 41.0 49 34.8730087103398 38.0 34.0 40.0 24.0 41.0 50 34.82360733920647 38.0 34.0 40.0 24.0 41.0 51 33.475806451612904 37.0 32.0 40.0 20.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 2.0 12 1.0 13 2.0 14 1.0 15 10.0 16 28.0 17 64.0 18 173.0 19 302.0 20 638.0 21 1001.0 22 1333.0 23 1610.0 24 1829.0 25 2068.0 26 2183.0 27 2474.0 28 3044.0 29 3775.0 30 4966.0 31 6156.0 32 8081.0 33 10415.0 34 14542.0 35 19748.0 36 23226.0 37 33220.0 38 50631.0 39 50022.0 40 7.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 20.52104722792608 34.07589256143604 18.90855799165397 26.494502218983907 2 19.517122607140493 35.0404881764589 20.191925548122143 25.250463668278467 3 20.055309001788434 33.086457574352515 20.896535735576606 25.96169768828244 4 17.13999470093396 32.57766443664304 19.427700867722063 30.854639994700932 5 15.046035636219116 36.48820957806186 17.874826124395575 30.590928661323442 6 19.056766244949326 38.3925614360469 18.684589653573557 23.86608266543022 7 75.95962774061071 8.48388752732331 9.065956812611777 6.4905279194541965 8 78.58183745114924 7.591740080810758 6.6018911041928865 7.224531363847123 9 69.5432039478042 13.034460488838842 12.658144002119625 4.764191561237332 10 23.135805126846392 46.26291647347155 14.154716168775252 16.446562230906803 11 15.708004901636086 32.49403855070544 35.31786116446976 16.480095383188715 12 19.429356825859443 23.081572497847255 38.45921375107637 19.029856925216933 13 25.469464131946744 26.007650526594688 29.067033185401076 19.455852156057496 14 16.05989600582897 32.44932768099623 33.28103265549447 18.209743657680335 15 14.307064317414056 32.87325296416507 33.579933099291246 19.23974961912963 16 15.999039544280322 34.42778366562893 27.652016957011327 21.92115983307942 17 14.436643041663908 31.220192753527193 29.30838908392396 25.034775120884944 18 19.444260449095847 27.62717758495065 26.65720010598132 26.27136185997218 19 18.470143074783067 33.90739882095781 28.974713519242236 18.64774458501689 20 18.748344041862623 30.571057163674904 27.595714380340464 23.084884414122012 21 19.14908591110817 31.230128502351462 27.532787971120086 22.08799761542028 22 15.356527786977544 31.579949658872625 28.067662449493273 24.995860104656554 23 18.649400543154268 28.693200635887923 26.61994104789031 26.037457773067494 24 14.729747631979864 32.70186129694641 25.984881102205737 26.583509968867986 25 16.770302046764257 32.12558786513877 27.770003974299527 23.334106113797443 26 19.763032390541166 29.83995164602239 25.839570775650795 24.557445187785653 27 15.039411803669603 28.515599125654102 27.857355766046233 28.58763330463006 28 19.392097767768433 27.414800953831886 31.719878121481088 21.473223156918593 29 19.512568722262703 28.9502881367159 25.060856461548653 26.476286679472743 30 18.343048287739286 29.103464264423394 29.493442405775983 23.060045042061336 31 20.922203086705967 29.717410743856394 23.316304563820626 26.04408160561701 32 19.676922567397494 25.45538848777903 26.679141551301583 28.18854739352189 33 18.405146717890972 30.31893753725906 28.38229449559515 22.89362124925482 34 17.72040802808505 24.066453600052988 28.39885407696893 29.814284294893024 35 17.479880108630855 26.191461879843676 29.89832417036497 26.430333841160497 36 17.93319864873816 24.773961714247864 33.49961912962841 23.793220507385573 37 20.247400145724317 26.58144002119626 27.362224282970125 25.80893555010929 38 20.62206067430615 26.252732330926676 29.484334636020403 23.64087235874677 39 19.54858581175068 24.917616082665432 27.811816917268334 27.72198118831556 40 20.64524408822945 26.855915082466712 26.536315161952707 25.962525667351127 41 17.95845201033318 21.856577465721667 32.40461681128701 27.780353712658147 42 22.37116645691197 24.550821355236142 30.159551566536397 22.918460621315493 43 18.182834337947938 23.027339868848117 30.68035040074187 28.10947539246208 44 21.819318407630657 20.641932171954693 29.608531496323774 27.93021792409088 45 23.712906537722727 23.122971451281714 28.34876134331324 24.81536066768232 46 17.514655229515796 24.208038020798835 32.254338610319934 26.02296813936544 47 19.776280055640193 24.61416175399086 27.09602901238657 28.513529177982385 48 18.688729548917003 20.57817778366563 34.135921043916014 26.59717162350136 49 20.446529111744056 21.16314499569451 32.118136053520566 26.27218983904087 50 19.241405577267006 20.908541432072596 28.606262833675565 31.24379015698483 51 19.35732264688349 19.743574882426973 34.68238722925084 26.2167152414387 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 2847.0 1 2243.0 2 1639.0 3 1117.0 4 595.0 5 540.0 6 485.0 7 544.5 8 604.0 9 612.0 10 620.0 11 736.0 12 852.0 13 909.0 14 966.0 15 1004.5 16 1043.0 17 1096.0 18 1149.0 19 1119.5 20 1090.0 21 1277.5 22 1465.0 23 1551.0 24 1637.0 25 1780.5 26 2173.5 27 2423.0 28 2527.0 29 2631.0 30 3432.5 31 4234.0 32 4175.5 33 4117.0 34 4308.0 35 4499.0 36 5581.5 37 6664.0 38 7032.5 39 7401.0 40 8188.0 41 8975.0 42 11599.0 43 14223.0 44 17814.0 45 21405.0 46 23493.0 47 25581.0 48 28911.5 49 32242.0 50 29484.0 51 26726.0 52 22768.5 53 18811.0 54 16138.0 55 13465.0 56 11465.0 57 9465.0 58 8289.0 59 7113.0 60 6289.5 61 5466.0 62 4346.0 63 3226.0 64 2548.5 65 1871.0 66 1752.0 67 1633.0 68 1283.5 69 934.0 70 810.0 71 686.0 72 533.5 73 381.0 74 296.5 75 131.0 76 50.0 77 77.0 78 104.0 79 75.0 80 46.0 81 30.5 82 15.0 83 21.0 84 27.0 85 17.0 86 7.0 87 3.5 88 0.0 89 0.5 90 1.0 91 1.0 92 1.0 93 1.0 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 241552.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 36.39920182817779 #Duplication Level Percentage of deduplicated Percentage of total 1 76.77854486311887 27.94677750546466 2 10.47393742251743 7.624859243558323 3 3.968244941596624 4.333228455984632 4 1.955119820752249 2.8465920381532754 5 1.1441829782878201 2.082367357753196 6 0.7529315423723031 1.644366430416639 7 0.5459322361611865 1.391004835397761 8 0.41854804772357634 1.2187851891104193 9 0.30367480636466 0.9948168510300059 >10 3.0208250400918986 24.039130290786247 >50 0.49702580667174684 12.402712459429026 >100 0.1296589060882818 8.195336821885142 >500 0.006824152952014831 1.520583559647612 >1k 0.0045494353013432205 3.759438961383056 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CTGTCTCTTATACACATCTGACGCTCTGCACTTCGTATGCCGTCTTCTGCT 3851 1.594273696760946 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 2436 1.0084785056633767 No Hit AAACTGTCTCTTATACACATCTGACGCTCTGCACTTCGTATGCCGTCTTCT 1583 0.6553454328674572 No Hit AAAAACTGTCTCTTATACACATCTGACGCTCTGCACTTCGTATGCCGTCTT 1211 0.5013413260912764 No Hit CCTGTCTCTTATACACATCTGACGCTCTGCACTTCGTATGCCGTCTTCTGC 764 0.3162880042392528 No Hit AAAAAACTGTCTCTTATACACATCTGACGCTCTGCACTTCGTATGCCGTCT 650 0.26909319732397163 No Hit CAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 630 0.26081340663708025 No Hit GCCCCAGGGAATGATACCTGTCTCTTATACACATCTGACGCTCTGCACTTC 554 0.22935020202689277 No Hit AATCTGTCTCTTATACACATCTGACGCTCTGCACTTCGTATGCCGTCTTCT 551 0.22810823342385905 No Hit AGCCCCGGGAATGATACCTGTCTCTTATACACATCTGACGCTCTGCACTTC 524 0.21693051599655563 No Hit AGCCTGTCTCTTATACACATCTGACGCTCTGCACTTCGTATGCCGTCTTCT 484 0.20037093462277272 No Hit AATGATACCTGTCTCTTATACACATCTGACGCTCTGCACTTCGTATGCCGT 483 0.19995694508842818 No Hit AATGATACGGCTGTCTCTTATACACATCTGACGCTCTGCACTTCGTATGCC 441 0.18256938464595615 No Hit GAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 413 0.17097767768430816 No Hit GAAAAACTGTCTCTTATACACATCTGACGCTCTGCACTTCGTATGCCGTCT 406 0.16807975094389616 No Hit AACCTGTCTCTTATACACATCTGACGCTCTGCACTTCGTATGCCGTCTTCT 404 0.16725177187520698 No Hit GCTCCAGGGAATGATACCTGTCTCTTATACACATCTGACGCTCTGCACTTC 365 0.1511061800357687 No Hit ACCTGTCTCTTATACACATCTGACGCTCTGCACTTCGTATGCCGTCTTCTG 355 0.14696628469232298 No Hit GCTGTCTCTTATACACATCTGACGCTCTGCACTTCGTATGCCGTCTTCTGC 353 0.14613830562363384 No Hit GCCCCAGGGAATGATACGGCTGTCTCTTATACACATCTGACGCTCTGCACT 341 0.14117043121149897 No Hit GAAAACTGTCTCTTATACACATCTGACGCTCTGCACTTCGTATGCCGTCTT 317 0.13123468238722924 No Hit CATGAATGATACGGCTGTCTCTTATACACATCTGACGCTCTGCACTTCGTA 291 0.12047095449427038 No Hit GCTCCAGGGAATGATACGGCTGTCTCTTATACACATCTGACGCTCTGCACT 280 0.11591706961648009 No Hit TACCTGTCTCTTATACACATCTGACGCTCTGCACTTCGTATGCCGTCTTCT 277 0.11467510101344638 No Hit AGCCCCGGGAATGATACGGCTGTCTCTTATACACATCTGACGCTCTGCACT 277 0.11467510101344638 No Hit GAACTGTCTCTTATACACATCTGACGCTCTGCACTTCGTATGCCGTCTTCT 269 0.1113631847386898 No Hit GAAACTGTCTCTTATACACATCTGACGCTCTGCACTTCGTATGCCGTCTTC 264 0.10929323706696695 No Hit TAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 253 0.10473935218917665 No Hit CAAAAACTGTCTCTTATACACATCTGACGCTCTGCACTTCGTATGCCGTCT 250 0.10349738358614294 No Hit GCCCCAGGGAATGATCTGTCTCTTATACACATCTGACGCTCTGCACTTCGT 247 0.10225541498310924 No Hit GCTTATGGGATTATTTTGAGACTGGATTTTGGTGAAAAACAATTCATCCGG 247 0.10225541498310924 No Hit TCTGTCTCTTATACACATCTGACGCTCTGCACTTCGTATGCCGTCTTCTGC 243 0.10059945684573093 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 1.7867788302311718 0.0 2 0.0 0.0 0.0 2.4988408293038353 0.0 3 0.0 0.0 0.0 3.2643074783069483 0.0 4 0.0 0.0 0.0 6.902447506127045 0.0 5 0.0 0.0 0.0 7.472925084453865 0.0 6 0.0 0.0 0.0 10.051665893886202 0.0 7 0.0 0.0 0.0 12.118715638868649 0.0 8 0.0 0.0 0.0 13.568092998608995 0.0 9 0.0 0.0 0.0 15.58794793667616 0.0 10 0.0 0.0 0.0 18.62124925481884 0.0 11 0.0 0.0 0.0 21.06544346558919 0.0 12 0.0 0.0 0.0 22.514820825329537 0.0 13 0.0 0.0 0.0 23.260001987149764 0.0 14 0.0 0.0 0.0 23.810608067828046 0.0 15 0.0 0.0 0.0 24.440286149566138 0.0 16 0.0 0.0 0.0 25.624710207325958 0.0 17 0.0 0.0 0.0 27.073259587997615 0.0 18 0.0 0.0 0.0 29.687603497383588 0.0 19 0.0 0.0 0.0 30.42864476386037 0.0 20 0.0 0.0 0.0 31.750099357488242 0.0 21 0.0 0.0 0.0 32.50604424720143 0.0 22 0.0 0.0 0.0 33.41930515996555 0.0 23 0.0 0.0 0.0 34.29696297277605 0.0 24 0.0 0.0 0.0 34.84756905345433 0.0 25 0.0 0.0 0.0 35.32075909121017 0.0 26 0.0 0.0 0.0 35.772421673180105 0.0 27 0.0 0.0 0.0 36.546168112870106 0.0 28 0.0 0.0 0.0 37.10836590051004 0.0 29 0.0 0.0 0.0 37.605567331257866 0.0 30 0.0 0.0 0.0 38.43230443134397 0.0 31 0.0 0.0 0.0 38.93281777836656 0.0 32 0.0 0.0 0.0 39.41884149168709 0.0 33 0.0 0.0 0.0 39.88209578061866 0.0 34 0.0 0.0 0.0 40.322166655626944 0.0 35 0.0 0.0 0.0 40.83013181426774 0.0 36 0.0 0.0 0.0 41.28841822878718 0.0 37 0.0 0.0 0.0 41.768232099092536 0.0 38 0.0 0.0 0.0 42.19836722527654 0.0 39 0.0 0.0 0.0 42.64257799562827 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATGGGCA 35 1.2066084E-7 45.000004 5 TCGTTGA 35 1.2066084E-7 45.000004 24 GCGACGG 35 1.2066084E-7 45.000004 2 AATCACA 35 1.2066084E-7 45.000004 43 GGTAACT 35 1.2066084E-7 45.000004 9 TCACATT 35 1.2066084E-7 45.000004 42 ATTACGG 35 1.2066084E-7 45.000004 2 ACTAGTG 35 1.2066084E-7 45.000004 39 ACAATTC 35 1.2066084E-7 45.000004 39 TCCACAC 35 1.2066084E-7 45.000004 26 ATCTTAT 35 1.2066084E-7 45.000004 15 CGGGAGA 65 0.0 45.000004 6 ACCACGC 35 1.2066084E-7 45.000004 34 CGCACAT 35 1.2066084E-7 45.000004 38 ACTCCAC 35 1.2066084E-7 45.000004 24 TTCATCC 35 1.2066084E-7 45.000004 43 AGTACGG 35 1.2066084E-7 45.000004 2 AGTACAG 35 1.2066084E-7 45.000004 1 TAGTAGA 65 0.0 45.000004 27 TAATCGT 35 1.2066084E-7 45.000004 21 >>END_MODULE