SRR3548383_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3548383_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	688049
Sequences flagged as poor quality	0
Sequence length	46
%GC	47

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	18977	2.7580884500958507	No Hit
CAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	5225	0.7593935897007336	No Hit
GAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	3794	0.5514142161386762	No Hit
AATGATACCTGTCTCTTATACACATCTGACGCGCGAATCATCGTAT	2298	0.33398784098225565	No Hit
AATGATACGGCTGTCTCTTATACACATCTGACGCGCGAATCATCGT	2243	0.3259942242485637	No Hit
AATCTGTCTCTTATACACATCTGACGCGCGAATCATCGTATGCCGT	2085	0.3030307434499578	No Hit
TAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	2061	0.29954261978434676	No Hit
CTGTCTCTTATACACATCTGACGCGCGAATCATCGTATGCCGTCTT	1651	0.23995384049682508	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTTGAAC	30	4.8646616E-6	40.000004	20
CGAACGT	30	4.8646616E-6	40.000004	32
ACGTTCG	30	4.8646616E-6	40.000004	17
GCGAAGT	30	4.8646616E-6	40.000004	38
TAGGTTA	30	4.8646616E-6	40.000004	13
TTTCGCG	30	4.8646616E-6	40.000004	1
CCGTGTA	30	4.8646616E-6	40.000004	11
CGTCTCA	30	4.8646616E-6	40.000004	29
TACGCGA	30	4.8646616E-6	40.000004	10
CTCGGTT	30	4.8646616E-6	40.000004	9
CACTACG	30	4.8646616E-6	40.000004	1
CGCTACG	60	0.0	40.000004	1
ATCCCGC	30	4.8646616E-6	40.000004	28
TCGCTAG	30	4.8646616E-6	40.000004	15
GTGTAAC	30	4.8646616E-6	40.000004	12
GCGATGC	30	4.8646616E-6	40.000004	9
TTAACGA	30	4.8646616E-6	40.000004	18
CGTAAGC	30	4.8646616E-6	40.000004	12
CGTAACG	30	4.8646616E-6	40.000004	1
CAGTCGC	30	4.8646616E-6	40.000004	25