##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3548265_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 476597 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 27.519327649985208 30.0 25.0 31.0 16.0 33.0 2 27.722249615503245 30.0 25.0 31.0 16.0 33.0 3 27.673260637393856 30.0 25.0 33.0 16.0 34.0 4 32.01200385231128 35.0 32.0 35.0 19.0 37.0 5 33.16494019055932 35.0 32.0 35.0 28.0 37.0 6 31.855834174365345 35.0 32.0 35.0 25.0 37.0 7 33.6565211279131 35.0 33.0 35.0 30.0 37.0 8 33.08884025707254 35.0 33.0 36.0 27.0 37.0 9 35.827535632830255 37.0 35.0 39.0 31.0 39.0 10 35.252477459992406 37.0 34.0 39.0 30.0 39.0 11 35.55656456083442 37.0 35.0 39.0 30.0 39.0 12 35.492365667429716 37.0 34.0 39.0 30.0 39.0 13 35.25171790842158 37.0 34.0 39.0 30.0 39.0 14 35.89729268123803 38.0 34.0 40.0 29.0 41.0 15 36.42496071104098 38.0 35.0 40.0 31.0 41.0 16 36.221587630639725 37.0 34.0 40.0 31.0 41.0 17 35.717826591438886 37.0 34.0 39.0 30.0 41.0 18 35.84946820898998 37.0 34.0 39.0 30.0 40.0 19 35.34390900488253 37.0 34.0 39.0 29.0 40.0 20 35.197814925398184 36.0 34.0 39.0 29.0 40.0 21 35.57298094616626 37.0 34.0 39.0 30.0 40.0 22 36.05513463156503 37.0 34.0 40.0 31.0 40.0 23 36.1629468922381 37.0 35.0 40.0 31.0 41.0 24 36.151119289462585 38.0 35.0 40.0 31.0 41.0 25 35.46258159409312 37.0 34.0 40.0 29.0 41.0 26 35.648212221226736 37.0 34.0 40.0 30.0 41.0 27 35.692175989357885 37.0 34.0 40.0 30.0 41.0 28 35.48189980213891 37.0 34.0 40.0 29.0 41.0 29 35.58290757180595 37.0 34.0 40.0 30.0 41.0 30 34.967790397337794 37.0 34.0 40.0 27.0 41.0 31 34.91960922960069 37.0 34.0 40.0 27.0 41.0 32 34.52486692110945 37.0 33.0 40.0 25.0 41.0 33 34.25046108137483 37.0 33.0 40.0 23.0 41.0 34 34.07782046466931 37.0 33.0 40.0 21.0 41.0 35 33.92684804981987 37.0 33.0 40.0 20.0 41.0 36 33.67266474610625 37.0 33.0 40.0 18.0 41.0 37 33.522913488754654 37.0 33.0 40.0 17.0 41.0 38 33.47642557548621 37.0 33.0 40.0 18.0 41.0 39 33.37565909982648 37.0 33.0 40.0 17.0 41.0 40 33.42013902731238 37.0 33.0 40.0 18.0 41.0 41 33.0330530825834 36.0 32.0 40.0 15.0 40.0 42 33.30377236952813 37.0 33.0 40.0 16.0 41.0 43 33.1269227460517 37.0 33.0 40.0 15.0 41.0 44 33.22993640329251 37.0 33.0 40.0 15.0 41.0 45 33.3370688443276 37.0 33.0 40.0 17.0 41.0 46 33.0326313426228 36.0 32.0 40.0 15.0 40.0 47 32.810158267886706 36.0 32.0 39.0 15.0 40.0 48 32.98053701554983 36.0 32.0 40.0 15.0 40.0 49 33.10669391540442 36.0 32.0 40.0 15.0 40.0 50 32.899069864057054 36.0 32.0 39.0 15.0 40.0 51 30.863962635098417 34.0 28.0 38.0 11.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 6.0 10 11.0 11 13.0 12 14.0 13 11.0 14 30.0 15 58.0 16 123.0 17 298.0 18 703.0 19 1452.0 20 2542.0 21 3851.0 22 4957.0 23 5687.0 24 6695.0 25 8468.0 26 10160.0 27 10392.0 28 10142.0 29 11205.0 30 13988.0 31 19015.0 32 27154.0 33 40796.0 34 52237.0 35 54895.0 36 67832.0 37 70271.0 38 45240.0 39 8351.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.72307840796312 21.353680363074044 22.016504510099725 16.906736718863108 2 28.648312935247176 35.21381796360447 22.799975660778394 13.337893440369955 3 22.486922913908398 34.14897701831946 31.55013564919628 11.813964418575862 4 20.953761773573902 23.449790913497147 41.91360835254943 13.682838960379524 5 27.813016028216715 27.04654036848742 29.74714486243094 15.393298740864925 6 16.87925018411782 42.2575047681794 29.351632511325082 11.511612536377694 7 64.04635362790786 5.8884130617691675 25.730963476480127 4.334269833842849 8 58.88266187156025 14.217882193971008 17.19419131887108 9.705264615597663 9 54.646168565895294 7.239869323558478 19.98501878945944 18.128943321086787 10 38.89680379859713 21.80752291768517 24.1306596558518 15.165013627865893 11 32.38857986936552 21.49887640920946 30.068590444337666 16.04395327708735 12 26.102975889483147 17.18453955857884 33.72052278969444 22.991961762243573 13 21.406974865557274 25.915186205536333 39.067597991594575 13.610240937311818 14 14.85468855238283 36.161788681003024 29.424230534392787 19.559292232221352 15 9.701697660707055 21.758634653596225 51.8780017499061 16.661665935790616 16 9.70442533209399 24.930706655728006 38.622777734647926 26.742090277530075 17 10.150294693420227 25.079679477629945 35.63933469996664 29.130691128983187 18 14.472604737335736 23.933218211612747 37.79608348353011 23.798093567521406 19 15.782936107445074 28.63656296619576 32.426557447906724 23.153943478452447 20 20.855145961892333 24.693399245064487 35.97861505632641 18.472839736716764 21 15.468834256195485 34.20478937131371 32.47943230863812 17.84694406385269 22 13.971972127394844 23.476438164738763 33.85879474692455 28.692794960941843 23 14.551497386680989 32.640155099591475 30.866119593702855 21.942227920024678 24 17.643837455963844 24.013999248841262 32.55832495798337 25.783838337211524 25 12.755011047069118 32.76227084937589 30.965784509764017 23.51693359379098 26 15.170259149763845 27.05388409914456 34.394677264019705 23.381179487071886 27 18.92584300782422 32.13008055023426 28.139287490269556 20.804788951671956 28 12.776832418164613 29.830233929294565 37.77426211243461 19.61867154010621 29 19.655180372515982 25.140317710770315 30.79897691340902 24.405525003304678 30 16.837915471561928 33.06588165682957 29.255324729278616 20.840878142329895 31 21.5580458962184 30.576776605811617 22.172821062658805 25.692356435311176 32 23.28025564575522 34.38250765321645 21.53181828672862 20.805418414299712 33 17.378414047927286 30.640352331214842 21.5339164954878 30.44731712537007 34 21.210792346573733 28.042560066471257 24.00266892154168 26.743978665413337 35 16.270559823079036 30.68483435690951 22.43677572456394 30.607830095447518 36 22.77437751391637 30.817441150489827 23.297670778456432 23.110510557137374 37 16.45709058177034 34.31263730153568 26.958415600601764 22.27185651609221 38 16.75000052455219 32.14287962366528 20.085942630776106 31.021177221006425 39 20.250652018371916 30.07026901134501 24.07128034796694 25.607798622316132 40 20.7212802430565 21.197153989639045 26.99303604512827 31.08852972217618 41 16.522135053304993 27.424847407767988 22.581761949823438 33.471255589103585 42 22.791373004865743 22.993010866623166 27.550949754194843 26.664666374316248 43 22.613025260335252 27.41288761784065 25.555133582460655 24.418953539363443 44 20.04544720172389 27.30902628426113 27.045910905859667 25.599615608155318 45 16.87316537871619 25.2529915211384 27.09857594571514 30.775267154430264 46 26.59542548526323 25.645986021733247 24.323065399068817 23.435523093934705 47 16.349032830672456 22.342775972152573 34.69283272869951 26.615358468475463 48 19.655180372515982 22.686252746030714 27.08262955914536 30.575937322307944 49 19.12643176520205 18.3075008864932 34.96245255425443 27.60361479405032 50 19.912210945515813 19.76890328726366 32.16742866614771 28.151457101072815 51 18.139854006634536 20.14196480464627 25.873431851228606 35.84474933749058 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 958.0 1 898.0 2 838.0 3 4283.5 4 7729.0 5 5352.5 6 2976.0 7 3054.0 8 3132.0 9 3449.5 10 3767.0 11 3902.5 12 4038.0 13 3944.5 14 3851.0 15 3852.0 16 3853.0 17 3673.0 18 3493.0 19 3439.5 20 3386.0 21 3278.5 22 3171.0 23 3352.5 24 3534.0 25 3550.0 26 3597.5 27 3629.0 28 4321.0 29 5013.0 30 5353.0 31 5693.0 32 5381.0 33 5069.0 34 5335.5 35 5602.0 36 6208.0 37 6814.0 38 8089.5 39 9365.0 40 13273.5 41 17182.0 42 22357.0 43 27532.0 44 32452.0 45 37372.0 46 64999.5 47 92627.0 48 79395.5 49 66164.0 50 59684.5 51 53205.0 52 43149.5 53 33094.0 54 26717.0 55 20340.0 56 16181.5 57 12023.0 58 11013.5 59 10004.0 60 8598.0 61 7192.0 62 6112.0 63 5032.0 64 3542.0 65 2052.0 66 2070.0 67 2088.0 68 1249.5 69 411.0 70 345.5 71 280.0 72 263.5 73 247.0 74 192.5 75 102.5 76 67.0 77 59.5 78 52.0 79 30.5 80 9.0 81 5.5 82 2.0 83 3.5 84 5.0 85 2.5 86 0.0 87 0.0 88 0.0 89 0.5 90 1.0 91 0.5 92 0.0 93 0.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 476597.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 31.916593649906027 #Duplication Level Percentage of deduplicated Percentage of total 1 77.74366616129349 24.81313001723954 2 9.629262515841889 6.146665177327948 3 3.798128760029193 3.6366999679161967 4 2.0356654280741546 2.598860251000192 5 1.2591943311691627 2.0094596897095682 6 0.7849411582202797 1.503158879160196 7 0.5867585493342564 1.3109133932796861 8 0.4314455495302394 1.1016217829133643 9 0.3323931738400896 0.9547972075311042 >10 2.4653507487154793 17.450792047401855 >50 0.7614117130750975 17.051176616612064 >100 0.15652714659035108 6.669622486431816 >500 0.006632506211455553 1.5768565049490777 >1k 0.006632506211455553 5.961741139600065 >5k 0.0 0.0 >10k+ 0.001989751863436666 7.214504838927309 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCGAAACCCATCGTATGC 12690 2.662626915402321 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGAAACCCATCGTATGCCG 11123 2.3338376028384564 No Hit GAATCTGTCTCTTATACACATCTGACGCGAAACCCATCGTATGCCGTCTTC 10268 2.1544407539283714 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4775 1.0018946825095416 No Hit GCTGTCTCTTATACACATCTGACGCGAAACCCATCGTATGCCGTCTTCTGC 4160 0.872854843819831 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCGAAACCCAT 3285 0.689261577391381 No Hit GAACTGTCTCTTATACACATCTGACGCGAAACCCATCGTATGCCGTCTTCT 3113 0.6531723867334457 No Hit GAATGATCTGTCTCTTATACACATCTGACGCGAAACCCATCGTATGCCGTC 2839 0.595681466731851 No Hit GAATGACTGTCTCTTATACACATCTGACGCGAAACCCATCGTATGCCGTCT 2703 0.5671458276069719 No Hit CTGTCTCTTATACACATCTGACGCGAAACCCATCGTATGCCGTCTTCTGCT 2670 0.5602217387016704 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCGAAACCCATCGTA 2004 0.4204810353401301 No Hit CCTGTCTCTTATACACATCTGACGCGAAACCCATCGTATGCCGTCTTCTGC 1543 0.32375361154182675 No Hit GAATGATCCGGCTGTCTCTTATACACATCTGACGCGAAACCCATCGTATGC 1071 0.22471815810842286 No Hit TCTGTCTCTTATACACATCTGACGCGAAACCCATCGTATGCCGTCTTCTGC 1000 0.2098208759182286 No Hit ACTGTCTCTTATACACATCTGACGCGAAACCCATCGTATGCCGTCTTCTGC 924 0.19387448934844323 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 831 0.17436114788804796 No Hit GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCGAAACCCATCGT 819 0.17184329737702922 No Hit GAATGCTGTCTCTTATACACATCTGACGCGAAACCCATCGTATGCCGTCTT 815 0.17100401387335631 No Hit GAATGATCCCTGTCTCTTATACACATCTGACGCGAAACCCATCGTATGCCG 721 0.15128085153704282 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 630 0.13218715182848403 No Hit GAACAAGGGAACACAACGAGCGACTGCCACAAAAAAAAGTGCACTCGGGAG 609 0.12778091343420123 No Hit GAATGATACGGCCTGTCTCTTATACACATCTGACGCGAAACCCATCGTATG 563 0.11812915314196272 No Hit GAATGATACGGCGCTGTCTCTTATACACATCTGACGCGAAACCCATCGTAT 537 0.11267381036808877 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.6357572540322327 0.0 2 0.0 0.0 0.0 2.4605694118930668 0.0 3 0.0 0.0 0.0 3.079540995851841 0.0 4 0.0 0.0 0.0 4.656554699253247 0.0 5 0.0 0.0 0.0 9.091328732660928 0.0 6 0.0 0.0 0.0 10.946774738405823 0.0 7 0.0 0.0 0.0 12.756269972324626 0.0 8 0.0 0.0 0.0 16.657259697396334 0.0 9 0.0 0.0 0.0 17.912198356263257 0.0 10 0.0 0.0 0.0 22.84277911946571 0.0 11 0.0 0.0 0.0 25.270826295591455 0.0 12 0.0 0.0 0.0 30.782401064211484 0.0 13 0.0 0.0 0.0 32.02265226176413 0.0 14 0.0 0.0 0.0 32.434950282943454 0.0 15 0.0 0.0 0.0 33.443978875234215 0.0 16 0.0 0.0 0.0 34.621073989135475 0.0 17 0.0 0.0 0.0 35.6987140078515 0.0 18 8.392835036729145E-4 0.0 0.0 37.75411930834647 0.0 19 8.392835036729145E-4 0.0 0.0 39.24384752736589 0.0 20 8.392835036729145E-4 0.0 0.0 40.17041651542078 0.0 21 8.392835036729145E-4 0.0 0.0 40.830512991059535 0.0 22 0.001678567007345829 0.0 0.0 41.46102472319381 0.0 23 0.001678567007345829 0.0 0.0 41.99313046452244 0.0 24 0.001678567007345829 0.0 0.0 42.415080245994 0.0 25 0.001678567007345829 0.0 0.0 42.745338304689284 0.0 26 0.001678567007345829 0.0 0.0 43.0586008724352 0.0 27 0.001678567007345829 0.0 0.0 43.38906875200641 0.0 28 0.001678567007345829 0.0 0.0 43.68554564967887 0.0 29 0.001678567007345829 0.0 0.0 44.00027696355621 0.0 30 0.001678567007345829 0.0 0.0 44.380472390720044 0.0 31 0.001678567007345829 0.0 0.0 44.735279491897764 0.0 32 0.001678567007345829 0.0 0.0 45.04014922460696 0.0 33 0.001678567007345829 0.0 0.0 45.310188691913716 0.0 34 0.001678567007345829 0.0 0.0 45.603518276447396 0.0 35 0.001678567007345829 0.0 0.0 45.913633531054536 0.0 36 0.001678567007345829 0.0 0.0 46.201507772814345 0.0 37 0.001678567007345829 0.0 0.0 46.49043111895375 0.0 38 0.001678567007345829 0.0 0.0 46.753756318231126 0.0 39 0.001678567007345829 0.0 0.0 47.05338052904236 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCACGAC 20 7.029124E-4 45.000004 25 GTTTGCG 20 7.029124E-4 45.000004 1 AGCGTGA 20 7.029124E-4 45.000004 22 CCTTACT 20 7.029124E-4 45.000004 45 ATCTCGC 20 7.029124E-4 45.000004 14 CTCACGA 20 7.029124E-4 45.000004 24 GTACCCT 20 7.029124E-4 45.000004 43 GGTACAC 20 7.029124E-4 45.000004 8 GTACAAA 20 7.029124E-4 45.000004 42 TACCAAC 20 7.029124E-4 45.000004 20 TTTACAG 40 6.8012014E-9 45.000004 1 CCTAGGC 20 7.029124E-4 45.000004 31 CCTAGCG 20 7.029124E-4 45.000004 20 CGTGCAA 20 7.029124E-4 45.000004 32 GCGAAGC 20 7.029124E-4 45.000004 40 GCGCGAG 20 7.029124E-4 45.000004 37 CCGGCTA 20 7.029124E-4 45.000004 21 AACTTGC 20 7.029124E-4 45.000004 28 AACTTCG 20 7.029124E-4 45.000004 16 CGCATGG 40 6.8012014E-9 45.000004 2 >>END_MODULE