FastQC Report![[OK]](data:image/png;base64,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)
Basic Statistics
| Measure | Value |
|---|---|
| Filename | SRR3548263_1.fastq |
| File type | Conventional base calls |
| Encoding | Sanger / Illumina 1.9 |
| Total Sequences | 430154 |
| Sequences flagged as poor quality | 0 |
| Sequence length | 51 |
| %GC | 44 |
Per base sequence quality
Per sequence quality scores
![[FAIL]](data:image/png;base64,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)
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
| Sequence | Count | Percentage | Possible Source |
|---|---|---|---|
| GAATGATACCTGTCTCTTATACACATCTGACGCAGATGGGTTCGTATGCCG | 6663 | 1.5489801326966621 | No Hit |
| GAATGATACGGCTGTCTCTTATACACATCTGACGCAGATGGGTTCGTATGC | 6511 | 1.5136439507711192 | No Hit |
| CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | 5627 | 1.3081361558883562 | No Hit |
| GAATCTGTCTCTTATACACATCTGACGCAGATGGGTTCGTATGCCGTCTTC | 5555 | 1.2913979644499411 | No Hit |
| GCTGTCTCTTATACACATCTGACGCAGATGGGTTCGTATGCCGTCTTCTGC | 2856 | 0.6639482603904648 | No Hit |
| GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCAGATGGGTT | 1888 | 0.4389125754962176 | No Hit |
| CTGTCTCTTATACACATCTGACGCAGATGGGTTCGTATGCCGTCTTCTGCT | 1874 | 0.4356579271609703 | Illumina Single End Adapter 1 (95% over 21bp) |
| GAACTGTCTCTTATACACATCTGACGCAGATGGGTTCGTATGCCGTCTTCT | 1704 | 0.39613719737582354 | No Hit |
| CCTGTCTCTTATACACATCTGACGCAGATGGGTTCGTATGCCGTCTTCTGC | 1567 | 0.3642881386666171 | No Hit |
| GAATGACTGTCTCTTATACACATCTGACGCAGATGGGTTCGTATGCCGTCT | 1450 | 0.3370885775791926 | No Hit |
| GAATGATCTGTCTCTTATACACATCTGACGCAGATGGGTTCGTATGCCGTC | 1412 | 0.32825453209780686 | No Hit |
| TATGAAAACTATGCCCTCGTGTACTCCTGCACCACCTTCTTCTGGCTCTTC | 1211 | 0.28152708099889806 | No Hit |
| GAATGATACGGCGACTGTCTCTTATACACATCTGACGCAGATGGGTTCGTA | 1182 | 0.2747853094473142 | No Hit |
| TCTGTCTCTTATACACATCTGACGCAGATGGGTTCGTATGCCGTCTTCTGC | 663 | 0.15413084616207218 | No Hit |
| GAATGATCCGGCTGTCTCTTATACACATCTGACGCAGATGGGTTCGTATGC | 656 | 0.1525035219944485 | No Hit |
| GAATGCTGTCTCTTATACACATCTGACGCAGATGGGTTCGTATGCCGTCTT | 611 | 0.14204215234543907 | No Hit |
| ACTGTCTCTTATACACATCTGACGCAGATGGGTTCGTATGCCGTCTTCTGC | 574 | 0.13344058174514242 | No Hit |
| AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | 561 | 0.13041840829098417 | No Hit |
| GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCAGATGGGTTCGT | 510 | 0.11856218935544015 | No Hit |
Adapter Content
Kmer Content
| Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| TGATCCG | 160 | 0.0 | 45.000004 | 4 |
| TTTAGCG | 20 | 7.028358E-4 | 45.000004 | 1 |
| AAGTAAC | 20 | 7.028358E-4 | 45.000004 | 21 |
| TAGAGAT | 20 | 7.028358E-4 | 45.000004 | 28 |
| CTCACTA | 20 | 7.028358E-4 | 45.000004 | 16 |
| ACCGGGA | 20 | 7.028358E-4 | 45.000004 | 4 |
| CAAAAGT | 20 | 7.028358E-4 | 45.000004 | 42 |
| CGACGGT | 20 | 7.028358E-4 | 45.000004 | 28 |
| ACCATGC | 20 | 7.028358E-4 | 45.000004 | 23 |
| TTTCGTC | 20 | 7.028358E-4 | 45.000004 | 15 |
| CGTTGTG | 20 | 7.028358E-4 | 45.000004 | 18 |
| GACAATT | 20 | 7.028358E-4 | 45.000004 | 25 |
| TAGGTAA | 20 | 7.028358E-4 | 45.000004 | 41 |
| CGCATGT | 20 | 7.028358E-4 | 45.000004 | 38 |
| GACGTAA | 20 | 7.028358E-4 | 45.000004 | 25 |
| ATCAGGC | 20 | 7.028358E-4 | 45.000004 | 17 |
| GAACTAA | 20 | 7.028358E-4 | 45.000004 | 24 |
| TGGAAGT | 20 | 7.028358E-4 | 45.000004 | 25 |
| GGACTAA | 20 | 7.028358E-4 | 45.000004 | 8 |
| GGGTACG | 20 | 7.028358E-4 | 45.000004 | 7 |