##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3548252_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 700092 Sequences flagged as poor quality 0 Sequence length 51 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 26.83691000611348 28.0 25.0 31.0 16.0 33.0 2 27.745560583466172 30.0 26.0 31.0 16.0 33.0 3 27.615320557869538 30.0 26.0 31.0 16.0 33.0 4 30.61659467612828 33.0 28.0 35.0 19.0 37.0 5 31.9054138598927 33.0 32.0 35.0 26.0 37.0 6 31.27215423115819 35.0 30.0 35.0 18.0 36.0 7 32.085397347777146 35.0 32.0 35.0 26.0 35.0 8 32.74489924181393 35.0 32.0 35.0 28.0 37.0 9 34.06031921518886 35.0 32.0 37.0 27.0 39.0 10 33.643396867840224 35.0 32.0 37.0 27.0 39.0 11 33.86975283248487 35.0 32.0 39.0 27.0 39.0 12 33.40355981785251 35.0 31.0 37.0 25.0 39.0 13 33.3030630260023 35.0 32.0 38.0 25.0 39.0 14 34.17483987818744 36.0 32.0 39.0 25.0 40.0 15 34.81941801934603 37.0 32.0 39.0 27.0 41.0 16 35.092866366134736 36.0 33.0 39.0 27.0 41.0 17 34.425959731006785 36.0 32.0 39.0 27.0 40.0 18 34.34503893773961 36.0 32.0 39.0 27.0 40.0 19 33.79667386572051 36.0 32.0 38.0 25.0 40.0 20 33.14239271410043 35.0 31.0 38.0 25.0 40.0 21 34.07822686161247 35.0 32.0 38.0 27.0 40.0 22 34.40276849328374 35.0 33.0 39.0 27.0 40.0 23 34.64064151568651 35.0 33.0 39.0 27.0 40.0 24 34.47679162167258 35.0 33.0 39.0 27.0 40.0 25 33.84808425178405 35.0 32.0 39.0 24.0 40.0 26 33.57821971969398 35.0 32.0 38.0 24.0 40.0 27 34.056741114025016 35.0 33.0 39.0 25.0 40.0 28 33.692754666529545 35.0 32.0 39.0 24.0 40.0 29 33.58846837272816 35.0 32.0 39.0 23.0 40.0 30 33.142698388211834 35.0 32.0 39.0 21.0 40.0 31 33.07964953177582 35.0 32.0 39.0 21.0 40.0 32 32.55887226250264 35.0 31.0 38.0 18.0 40.0 33 32.10833718996932 35.0 30.0 39.0 15.0 40.0 34 32.010831433583014 35.0 31.0 39.0 15.0 40.0 35 32.03709655302446 35.0 31.0 39.0 12.0 40.0 36 31.738455802951613 35.0 30.0 39.0 10.0 40.0 37 31.843116333281912 35.0 30.0 39.0 10.0 40.0 38 31.327018449003845 35.0 30.0 39.0 10.0 40.0 39 31.36682750267108 35.0 30.0 39.0 10.0 40.0 40 30.90627660364638 35.0 28.0 38.0 10.0 40.0 41 30.752659650445942 35.0 28.0 38.0 9.0 40.0 42 31.039100575352954 35.0 29.0 38.0 10.0 40.0 43 31.172604457699844 35.0 29.0 39.0 10.0 40.0 44 31.262298383641006 35.0 30.0 39.0 10.0 40.0 45 31.208404038326393 35.0 29.0 39.0 10.0 40.0 46 30.9541674522777 35.0 29.0 38.0 10.0 40.0 47 30.800024853876348 35.0 28.0 38.0 10.0 40.0 48 30.837122835284504 35.0 28.0 38.0 10.0 40.0 49 30.926665352553666 35.0 29.0 38.0 10.0 40.0 50 30.80129897213509 35.0 28.0 38.0 8.0 40.0 51 28.497651737200254 33.0 23.0 37.0 8.0 39.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 6.0 9 43.0 10 35.0 11 37.0 12 35.0 13 49.0 14 116.0 15 259.0 16 562.0 17 1241.0 18 2470.0 19 4207.0 20 6281.0 21 8818.0 22 11369.0 23 14620.0 24 18201.0 25 21732.0 26 23797.0 27 23866.0 28 24629.0 29 27905.0 30 34316.0 31 43476.0 32 54269.0 33 65182.0 34 71629.0 35 68598.0 36 72061.0 37 64169.0 38 32912.0 39 3201.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.59841278003462 15.314415819635133 19.204190306416873 21.88298109391337 2 30.697822571890555 38.012432651708636 20.350182547436624 10.939562228964194 3 20.5193031772967 37.84731149620335 32.40017026333682 9.233215063163128 4 18.29530975928878 19.285608177210996 50.04527976323112 12.373802300269107 5 31.237180256309173 22.094096204498836 31.589562514640935 15.079161024551057 6 15.081589276837901 41.93748821583449 33.31990652657079 9.661015980756815 7 58.77256132051216 3.8143558275198117 34.44547288070711 2.9676099712609196 8 54.257583289053436 17.160316072744724 22.026819332316325 6.5552813058855115 9 51.30140038737766 4.415705364437817 22.239648503339563 22.043245744844963 10 39.50723619181479 17.73281225896025 28.272427052444538 14.487524496780424 11 34.36805448426778 18.592842083611867 32.37503071024951 14.664072721870841 12 27.225850316815503 14.764345257480446 37.25667483702142 20.753129588682633 13 19.06506573421779 25.154265439399392 43.71482605143324 12.065842774949578 14 14.857047359489894 35.04225158979106 32.44587854167738 17.65482250904167 15 9.654588254115174 18.99521777137862 57.04864503522394 14.301548939282267 16 10.476337395656572 21.266490689795056 40.91019466013039 27.346977254417993 17 10.695879970061076 21.73785731018209 40.614519234614875 26.951743485141954 18 14.156853670660427 22.098952709072524 40.342126463379095 23.402067156887952 19 16.962770607291613 25.10112956582849 35.173805728389986 22.762294098489914 20 20.141781365877627 21.802705930077764 42.523839723921995 15.531672980122613 21 16.330139467384285 30.733246487604486 36.66975197545466 16.266862069556574 22 14.317689675071277 18.78267427709501 39.29812081840672 27.601515229426987 23 14.317689675071277 31.223610611176817 35.29507550436228 19.163624209389624 24 18.23088965450255 20.05222170800409 37.2935271364335 24.423361501059862 25 12.406512286956572 31.944801540368978 35.03653805499848 20.612148117675964 26 12.984293492855226 23.196379904355428 36.99785171091799 26.821474891871354 27 18.253886632042647 28.506824817309724 30.66596961542197 22.573318935225657 28 12.780320300760472 23.881004210875144 43.3265913622781 20.012084126086286 29 17.813087422795864 18.757963239117146 34.96026236551767 28.46868697256932 30 15.612662335807295 27.137290527530666 35.457339892471275 21.792707244190765 31 28.50139695925678 20.732418025059562 28.28842494986373 22.477760065819922 32 28.23128960193803 28.860064105860374 26.472806431154762 16.435839861046833 33 19.409591882209767 27.225421801706062 26.896322197654023 26.46866411843015 34 22.900133125360668 23.04997057529582 32.413025716620105 21.636870582723414 35 16.274289664786913 27.564377253275286 27.668220748130246 28.49311233380756 36 24.703324705895795 26.604217731383876 26.432811687606772 22.259645875113556 37 20.12678333704713 23.881147049244955 33.75384949406649 22.23822011964142 38 22.991406843671975 30.425286962284957 22.900704478839923 23.682601715203145 39 27.077726927318125 23.196951257834687 31.65198288224976 18.07333893259743 40 19.740405546699577 30.100043994217902 30.160036109539888 19.999514349542633 41 15.404403992618112 29.028756220611008 32.146489318546706 23.42035046822418 42 20.52044588425521 26.348679887786176 32.91967341435126 20.211200813607356 43 22.99483496454752 27.669934808568016 25.3748078823926 23.960422344491867 44 20.315901338681204 23.756449152397114 31.861241094027644 24.066408414894042 45 17.41399701753484 24.389080292304442 28.80092902075727 29.39599366940345 46 28.451260691451978 27.49010130097187 26.350536786593764 17.708101220982385 47 16.392559834993115 22.24436216954343 40.519817395428035 20.843260600035425 48 21.49903155585266 24.117116036178103 29.333001948315363 25.050850459653873 49 18.34330345154637 20.097644309605023 39.18513566788365 22.37391657096496 50 21.09565599949721 22.476188843751967 32.32832256332025 24.099832593430577 51 18.31616416128166 22.13209121086943 27.498528764790915 32.053215863058 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 95.0 1 221.0 2 347.0 3 7106.5 4 13866.0 5 11710.5 6 9555.0 7 9779.0 8 10003.0 9 10454.0 10 10905.0 11 10809.5 12 10714.0 13 10282.0 14 9850.0 15 9303.0 16 8756.0 17 8221.5 18 7687.0 19 6878.0 20 6069.0 21 5701.0 22 5333.0 23 5187.5 24 5042.0 25 4684.0 26 4719.0 27 5112.0 28 5342.5 29 5573.0 30 7011.0 31 8449.0 32 9482.0 33 10515.0 34 10939.0 35 11363.0 36 11801.5 37 12240.0 38 13952.5 39 15665.0 40 20991.0 41 26317.0 42 32636.0 43 38955.0 44 43672.5 45 48390.0 46 107794.0 47 167198.0 48 115995.0 49 64792.0 50 58555.5 51 52319.0 52 42790.5 53 33262.0 54 28687.0 55 24112.0 56 21740.5 57 19369.0 58 17857.5 59 16346.0 60 14497.0 61 12648.0 62 11147.5 63 9647.0 64 8098.5 65 6550.0 66 4774.5 67 2999.0 68 2611.0 69 2223.0 70 1788.0 71 1353.0 72 1090.5 73 828.0 74 708.5 75 459.5 76 330.0 77 264.0 78 198.0 79 162.5 80 127.0 81 83.0 82 39.0 83 29.0 84 19.0 85 14.0 86 9.0 87 5.5 88 2.0 89 3.0 90 4.0 91 2.5 92 1.0 93 1.0 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 700092.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 31.366949796829992 #Duplication Level Percentage of deduplicated Percentage of total 1 84.64433589228473 26.5503463451931 2 7.632124325564495 4.787929211262929 3 2.4604370012033643 2.3152921168502654 4 1.1209799346587002 1.4064688533477283 5 0.6620462517250433 1.038318577051945 6 0.41969077860587256 0.7898651749633736 7 0.294888784213121 0.6474833183042839 8 0.21964002365565122 0.551155007630509 9 0.1564385353524792 0.44162997162217454 >10 1.4383785272622938 10.252511254523624 >50 0.5295932541660396 12.106322366294469 >100 0.41123542786242734 18.51937999326026 >500 0.003713186707561421 0.8349539260972427 >1k 0.0027848900306710654 2.380383032552732 >5k 0.002320741692225888 5.007830897291519 >10k+ 0.0013924450153355327 12.37012995375385 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCCCGGATAATCGTATGC 31112 4.443987361661039 No Hit GAATCTGTCTCTTATACACATCTGACGCCCGGATAATCGTATGCCGTCTTC 27440 3.919484867703102 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCCCGGATAATCGTATGCCG 26414 3.772932700273678 No Hit GAACTGTCTCTTATACACATCTGACGCCCGGATAATCGTATGCCGTCTTCT 8683 1.2402655650971586 No Hit GCTGTCTCTTATACACATCTGACGCCCGGATAATCGTATGCCGTCTTCTGC 7862 1.122995263479657 No Hit GAATGATCTGTCTCTTATACACATCTGACGCCCGGATAATCGTATGCCGTC 6446 0.9207361318226748 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5895 0.8420321900550214 No Hit GAATGACTGTCTCTTATACACATCTGACGCCCGGATAATCGTATGCCGTCT 5511 0.7871822560463482 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCCCGGATAATCGTA 4404 0.6290601806619701 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCCCGGATAAT 4171 0.5957788404952492 No Hit GAATGCTGTCTCTTATACACATCTGACGCCCGGATAATCGTATGCCGTCTT 2971 0.42437279671814565 No Hit GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCCCGGATAATCGT 1785 0.2549664901184416 No Hit CTGTCTCTTATACACATCTGACGCCCGGATAATCGTATGCCGTCTTCTGCT 1588 0.22682733126503374 No Hit GAATGATACGGCGCTGTCTCTTATACACATCTGACGCCCGGATAATCGTAT 1431 0.204401707204196 No Hit GAATGATACGGCCTGTCTCTTATACACATCTGACGCCCGGATAATCGTATG 938 0.1339823908857693 No Hit TTGTTGGGGACTCTTAAAATGTAGTTTCAGTTTGTAAAGACCAAATTCCAA 828 0.11827017020620147 No Hit TTGATGCGGGATAAGGCATCATTATAACTAAAAATGGGATATATTCCTTAT 799 0.11412785748158814 No Hit GAATGATACGGCGACCACCCGTCTCTTATACACATCTGACGCCCGGATAAT 788 0.11255663541363135 No Hit CCTGTCTCTTATACACATCTGACGCCCGGATAATCGTATGCCGTCTTCTGC 773 0.11041405986641756 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.4283836981425298E-4 0.0 0.0 0.26753626666209585 0.0 2 1.4283836981425298E-4 0.0 0.0 1.8561846157362176 0.0 3 1.4283836981425298E-4 0.0 0.0 2.099295521160076 0.0 4 1.4283836981425298E-4 0.0 0.0 3.7855024768173324 0.0 5 1.4283836981425298E-4 0.0 0.0 8.870976957314182 0.0 6 1.4283836981425298E-4 0.0 0.0 9.80928220862401 0.0 7 1.4283836981425298E-4 0.0 0.0 11.067116893208322 0.0 8 1.4283836981425298E-4 0.0 0.0 12.957011364220703 0.0 9 1.4283836981425298E-4 0.0 0.0 13.402667078041171 0.0 10 1.4283836981425298E-4 0.0 0.0 18.26817046902407 0.0 11 1.4283836981425298E-4 0.0 0.0 19.039640504390853 0.0 12 1.4283836981425298E-4 0.0 0.0 24.868588699770886 0.0 13 1.4283836981425298E-4 0.0 0.0 25.887883306765396 0.0 14 1.4283836981425298E-4 0.0 0.0 26.38838895459454 0.0 15 1.4283836981425298E-4 0.0 0.0 27.350119698553904 0.0 16 1.4283836981425298E-4 0.0 0.0 28.0575981442439 0.0 17 1.4283836981425298E-4 0.0 0.0 28.498683030230314 0.0 18 7.141918490712649E-4 0.0 0.0 29.276866468978362 0.0 19 7.141918490712649E-4 0.0 0.0 30.227455820092217 0.0 20 7.141918490712649E-4 0.0 0.0 30.64668643549705 0.0 21 8.570302188855179E-4 0.0 0.0 30.90393833953252 0.0 22 8.570302188855179E-4 0.0 0.0 31.216183015946477 0.0 23 8.570302188855179E-4 0.0 0.0 31.45943675974015 0.0 24 8.570302188855179E-4 0.0 0.0 31.647412054415707 0.0 25 8.570302188855179E-4 0.0 0.0 31.797535181090485 0.0 26 8.570302188855179E-4 0.0 0.0 31.9880815664227 0.0 27 8.570302188855179E-4 0.0 0.0 32.18805528416265 0.0 28 8.570302188855179E-4 0.0 0.0 32.33346474463356 0.0 29 8.570302188855179E-4 0.0 0.0 32.478302851625216 0.0 30 8.570302188855179E-4 0.0 0.0 32.66584963119133 0.0 31 8.570302188855179E-4 0.0 0.0 32.83011375647772 0.0 32 8.570302188855179E-4 0.0 0.0 32.98352216565823 0.0 33 8.570302188855179E-4 0.0 0.0 33.153071310627745 0.0 34 8.570302188855179E-4 0.0 0.0 33.337761322797576 0.0 35 8.570302188855179E-4 0.0 0.0 33.50488221548025 0.0 36 8.570302188855179E-4 0.0 0.0 33.66057603857779 0.0 37 8.570302188855179E-4 0.0 0.0 33.818412437222534 0.0 38 8.570302188855179E-4 0.0 0.0 33.9553944338744 0.0 39 8.570302188855179E-4 0.0 0.0 34.12037275100987 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGTTTC 25 3.8892365E-5 45.000004 18 AGTCCGT 30 2.1642809E-6 45.000004 29 GTACCGG 25 3.8892365E-5 45.000004 2 AGTCATA 25 3.8892365E-5 45.000004 42 CTCGTAG 25 3.8892365E-5 45.000004 1 CGAGTAC 35 1.2110104E-7 45.000004 9 ACTGAGT 35 1.2110104E-7 45.000004 13 TCATTAC 25 3.8892365E-5 45.000004 41 GCGCGCC 25 3.8892365E-5 45.000004 16 CATTGTC 30 2.1642809E-6 45.000004 14 TTTCGAG 25 3.8892365E-5 45.000004 1 CGGTTGA 25 3.8892365E-5 45.000004 45 CACATAG 30 2.1642809E-6 45.000004 26 CGCATCG 30 2.1642809E-6 45.000004 21 TGTGGCC 25 3.8892365E-5 45.000004 15 AGGACGG 60 0.0 45.000004 2 GTCTATC 25 3.8892365E-5 45.000004 33 ATAGAGT 30 2.1642809E-6 45.000004 21 CCTGTTA 25 3.8892365E-5 45.000004 30 GTCTAAT 25 3.8892365E-5 45.000004 16 >>END_MODULE