##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3548226_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 564210 Sequences flagged as poor quality 0 Sequence length 51 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 26.639471118909626 28.0 25.0 31.0 16.0 33.0 2 27.21930486875454 30.0 25.0 31.0 16.0 33.0 3 27.17519895074529 30.0 25.0 31.0 16.0 33.0 4 30.5494904379575 33.0 28.0 35.0 19.0 37.0 5 31.91391148685773 33.0 32.0 35.0 26.0 37.0 6 30.873224508604952 33.0 30.0 35.0 17.0 37.0 7 31.608534056468336 33.0 30.0 35.0 25.0 35.0 8 32.65761152762269 35.0 32.0 35.0 27.0 37.0 9 33.99661650803779 35.0 32.0 37.0 27.0 39.0 10 33.57289838889775 35.0 32.0 37.0 27.0 39.0 11 33.71659842966272 35.0 32.0 39.0 26.0 39.0 12 33.260582052781764 35.0 31.0 37.0 25.0 39.0 13 33.32700767444746 35.0 32.0 38.0 24.0 39.0 14 33.91638574289715 36.0 32.0 39.0 24.0 40.0 15 34.93031495365201 37.0 33.0 39.0 27.0 40.0 16 35.05105900285355 36.0 33.0 39.0 27.0 40.0 17 34.527472040552276 36.0 32.0 39.0 27.0 40.0 18 34.42634302830506 36.0 32.0 39.0 27.0 40.0 19 33.72502082557913 36.0 32.0 38.0 25.0 40.0 20 33.692598500558304 35.0 32.0 38.0 25.0 40.0 21 33.980532071391856 35.0 32.0 38.0 26.0 40.0 22 34.43685861647259 35.0 33.0 39.0 27.0 40.0 23 34.679931231279134 35.0 33.0 39.0 27.0 40.0 24 34.41363499406249 35.0 33.0 39.0 26.0 40.0 25 33.46997749065064 35.0 32.0 39.0 23.0 40.0 26 33.52163910600663 35.0 32.0 39.0 23.0 40.0 27 33.87940305914464 35.0 33.0 39.0 24.0 40.0 28 33.75769128515978 35.0 33.0 39.0 24.0 40.0 29 33.66461778415838 35.0 33.0 39.0 23.0 40.0 30 32.863720954963576 35.0 31.0 39.0 20.0 40.0 31 32.915586395136565 35.0 31.0 39.0 21.0 40.0 32 32.370535793410255 35.0 31.0 39.0 16.0 40.0 33 32.059437089027135 35.0 30.0 39.0 15.0 40.0 34 31.989300083302318 35.0 30.0 39.0 12.0 40.0 35 31.648669821520357 35.0 30.0 39.0 10.0 40.0 36 31.408450754151822 35.0 30.0 39.0 10.0 40.0 37 31.240328955530742 35.0 30.0 39.0 9.0 40.0 38 30.926332393966785 35.0 29.0 39.0 9.0 40.0 39 30.99435316637422 35.0 29.0 39.0 8.0 40.0 40 30.56168802396271 35.0 27.0 39.0 8.0 40.0 41 30.416603746831854 35.0 26.0 38.0 8.0 40.0 42 30.69284131794899 35.0 28.0 38.0 8.0 40.0 43 30.5304496552702 35.0 27.0 38.0 8.0 40.0 44 30.52471951932791 35.0 27.0 38.0 8.0 40.0 45 30.531493592811188 35.0 27.0 38.0 8.0 40.0 46 30.284940004608213 35.0 27.0 38.0 8.0 40.0 47 30.360631679693732 35.0 27.0 38.0 8.0 40.0 48 30.176799418656174 35.0 26.0 38.0 8.0 40.0 49 30.309026780808566 35.0 27.0 38.0 8.0 40.0 50 30.2010049449673 35.0 27.0 38.0 8.0 40.0 51 27.91940943974761 32.0 22.0 36.0 7.0 39.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 2.0 8 9.0 9 43.0 10 48.0 11 54.0 12 43.0 13 74.0 14 100.0 15 320.0 16 753.0 17 1739.0 18 3179.0 19 5132.0 20 7242.0 21 9594.0 22 11684.0 23 13311.0 24 15069.0 25 17277.0 26 18241.0 27 18685.0 28 19661.0 29 22427.0 30 26709.0 31 32972.0 32 41303.0 33 49608.0 34 54277.0 35 51667.0 36 56177.0 37 53576.0 38 30198.0 39 3036.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 35.79801846830081 21.36225873345031 22.326793215292177 20.5129295829567 2 30.0070895588522 32.57935874940182 24.988036369436912 12.425515322309069 3 23.70571241204516 31.896634231934918 32.9678665745024 11.429786781517521 4 20.70328423813828 26.751741372893072 39.4766133177363 13.068361071232342 5 24.904379574980947 29.4092625086404 31.538611509898796 14.147746406479857 6 16.282767054820013 41.761932613743106 30.77612945534464 11.179170876092236 7 65.4511618014569 8.297265202672763 23.30657024866628 2.945002747204055 8 63.21954591375552 15.19168394746637 16.17234717569699 5.416422963081122 9 59.7561191754843 9.398450931390794 17.376154268800622 13.469275624324275 10 38.4826571666578 26.652842026904878 22.541075131599936 12.323425674837383 11 33.6115985182822 25.645238475035892 27.800641605076127 12.942521401605786 12 29.57161340635579 20.295634604136758 32.598855036245375 17.533896953262083 13 21.856755463391288 30.43370376278336 34.47971499973414 13.229825774091209 14 14.80087201573882 39.024476701937225 28.72086634409174 17.453784938232218 15 10.629021109161481 24.478474326935007 49.99680969851651 14.895694865387002 16 11.469133833147232 25.86926853476542 39.476436078765 23.185161553322345 17 12.588043458995765 24.201095336842666 35.28615231917194 27.92470888498963 18 16.333102922670637 24.6939969160419 37.57572535049006 21.3971748107974 19 19.17956080182911 27.21132202548696 32.4478474326935 21.16126973999043 20 22.839191081334963 24.70427677637759 35.65091012211765 16.805622020169793 21 18.464933269527304 32.74649509934244 32.78495595611563 16.003615675014622 22 17.446518140408713 25.324613175945128 31.97142907782563 25.257439605820526 23 16.970808741426065 32.49339784831889 31.484730862622072 19.051062547632974 24 18.468832526896016 24.965527020081176 33.97440669254356 22.591233760479255 25 14.751245103773417 32.03310823983978 32.741709647117204 20.473937009269598 26 16.515127346200885 29.29476613317736 32.940749011892734 21.24935750872902 27 17.76732067847078 32.69066482338137 30.198862125804222 19.34315237234363 28 15.75654454901544 28.58545577001471 38.60335690611652 17.054642774853335 29 20.660924123996384 26.07982843267578 32.603286010527995 20.655961432799845 30 17.51617305613158 28.646071498201024 35.67767320678471 18.160082238882687 31 25.516385742897146 25.997766788961556 27.51989507452899 20.96595239361231 32 27.816593112493575 27.029829318870636 27.109055139043974 18.04452242959182 33 21.779833749844915 25.048652097623226 31.351801634143317 21.819712518388542 34 25.521880151007604 23.01199907835735 31.720458694457736 19.745662076177307 35 20.214990872192978 22.291345421031174 31.627053756579997 25.86660995019585 36 29.40961698658301 21.28019708973609 31.8287517059251 17.4814342177558 37 24.79874514808316 23.687102320058134 34.26029315325854 17.25385937860017 38 25.12592828911221 24.876907534428668 28.815689193739917 21.1814749827192 39 26.660640541642294 21.44467485510714 32.812959713581826 19.08172488966874 40 24.003651122808883 19.87752787082824 32.98594494957551 23.132876056787367 41 18.198011378741956 22.007231350029244 34.59031211782847 25.20444515340033 42 23.477960333918222 20.777724606086387 31.299870615550944 24.444444444444443 43 23.95544212261392 20.949646408252246 32.70395774622924 22.39095372290459 44 22.977791956895484 22.40123358324028 32.79665372822176 21.824320731642473 45 19.377536732776804 24.740433526523812 30.444692579004272 25.437337161695112 46 24.258343524574183 25.72641392389359 31.42695095797664 18.588291593555592 47 18.711472678612573 21.72187660622818 39.634887719111674 19.93176299604757 48 21.002995338615055 22.575636731004415 31.76370500345616 24.657662926924374 49 19.631165700714273 19.32471951932791 37.728328104783685 23.315786675174138 50 20.03296644866273 23.04709239467574 32.733733893408484 24.186207263253042 51 18.6770883181794 23.800358022722037 27.831835664025807 29.690717995072756 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 120.0 1 271.0 2 422.0 3 4214.5 4 8007.0 5 6848.0 6 5689.0 7 6034.0 8 6379.0 9 7046.0 10 7713.0 11 7921.5 12 8130.0 13 8245.5 14 8361.0 15 8343.0 16 8325.0 17 8206.5 18 8088.0 19 7825.0 20 7562.0 21 7260.5 22 6959.0 23 6310.5 24 5662.0 25 5211.0 26 4560.0 27 4360.0 28 5085.5 29 5811.0 30 6008.5 31 6206.0 32 6894.5 33 7583.0 34 8269.0 35 8955.0 36 10046.5 37 11138.0 38 12969.0 39 14800.0 40 19000.0 41 23200.0 42 29030.0 43 34860.0 44 39734.5 45 44609.0 46 66633.0 47 88657.0 48 71896.0 49 55135.0 50 51007.0 51 46879.0 52 39737.0 53 32595.0 54 27860.0 55 23125.0 56 20184.5 57 17244.0 58 16775.0 59 16306.0 60 15127.0 61 13948.0 62 12033.0 63 10118.0 64 7742.0 65 5366.0 66 4141.5 67 2917.0 68 2245.5 69 1574.0 70 1267.5 71 961.0 72 858.5 73 756.0 74 599.5 75 315.0 76 187.0 77 191.0 78 195.0 79 128.0 80 61.0 81 44.5 82 28.0 83 17.0 84 6.0 85 4.5 86 3.0 87 3.0 88 3.0 89 1.5 90 0.0 91 1.0 92 2.0 93 1.5 94 1.0 95 1.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 564210.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 37.07500126655139 #Duplication Level Percentage of deduplicated Percentage of total 1 85.66024349074254 31.758536359123806 2 6.685756050694389 4.957488280946962 3 2.0903636534756207 2.3250070530048492 4 1.0383153440778816 1.5398217078706882 5 0.6037567408939234 1.1192140966665574 6 0.43867785117112706 0.9758389132666547 7 0.2638245062981255 0.6846905733605209 8 0.23159491949861963 0.6869105546990553 9 0.1800013502050633 0.6006195258150314 >10 1.8899824000178662 17.206743532366286 >50 0.7327194423305321 19.501737396465852 >100 0.1759891674526395 8.375961689994332 >500 0.0029250277138942854 0.721342693555897 >1k 0.004387541570841428 4.0981519001970454 >5k 4.8750461898238085E-4 1.3579172279342155 >10k+ 9.750092379647617E-4 4.090018494732246 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCGTGGTTCTTCGTATGC 11529 2.043388100175467 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGTGGTTCTTCGTATGCCG 11100 1.967352581485617 No Hit GAATCTGTCTCTTATACACATCTGACGCGTGGTTCTTCGTATGCCGTCTTC 7513 1.3315963914145441 No Hit GCTGTCTCTTATACACATCTGACGCGTGGTTCTTCGTATGCCGTCTTCTGC 4786 0.8482657166657805 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3169 0.5616703000655784 No Hit GAACTGTCTCTTATACACATCTGACGCGTGGTTCTTCGTATGCCGTCTTCT 2564 0.45444072242604705 No Hit GAATGACTGTCTCTTATACACATCTGACGCGTGGTTCTTCGTATGCCGTCT 2549 0.45178213785647187 No Hit GAATGATCTGTCTCTTATACACATCTGACGCGTGGTTCTTCGTATGCCGTC 2447 0.4337037627833608 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCGTGGTTCTT 2148 0.38070931036316263 No Hit CTGTCTCTTATACACATCTGACGCGTGGTTCTTCGTATGCCGTCTTCTGCT 2034 0.3605040676343914 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCGTGGTTCTTCGTA 1614 0.28606369968628703 No Hit CCTGTCTCTTATACACATCTGACGCGTGGTTCTTCGTATGCCGTCTTCTGC 1363 0.2415767178887294 No Hit GAATCTGTCTCTTATACACATCTGACGCGTGGGTCTTCGTATGCCGTCTTC 805 0.1426773719005335 No Hit GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCGTGGTTCTTCGT 754 0.13363818436397795 No Hit GAATGATACGGCGCTGTCTCTTATACACATCTGACGCGTGGTTCTTCGTAT 635 0.11254674677868169 No Hit ACTGTCTCTTATACACATCTGACGCGTGGTTCTTCGTATGCCGTCTTCTGC 614 0.10882472838127648 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 613 0.10864748940997146 No Hit TCTGTCTCTTATACACATCTGACGCGTGGTTCTTCGTATGCCGTCTTCTGC 570 0.10102621364385601 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.7723897130501054E-4 0.0 0.0 0.4730508144130732 0.0 2 1.7723897130501054E-4 0.0 0.0 2.1426419241062726 0.0 3 1.7723897130501054E-4 0.0 0.0 2.448379149607416 0.0 4 1.7723897130501054E-4 0.0 0.0 3.396962124031832 0.0 5 1.7723897130501054E-4 0.0 0.0 6.168270679356977 0.0 6 1.7723897130501054E-4 0.0 0.0 6.817851509189841 0.0 7 1.7723897130501054E-4 0.0 0.0 7.803477428617004 0.0 8 1.7723897130501054E-4 0.0 0.0 9.358394923875862 0.0 9 1.7723897130501054E-4 0.0 0.0 9.866184576664716 0.0 10 1.7723897130501054E-4 0.0 0.0 13.315254958260223 0.0 11 1.7723897130501054E-4 0.0 0.0 14.292727885007356 0.0 12 1.7723897130501054E-4 0.0 0.0 17.9730951241559 0.0 13 1.7723897130501054E-4 0.0 0.0 18.803814182662485 0.0 14 1.7723897130501054E-4 0.0 0.0 19.137732404601124 0.0 15 1.7723897130501054E-4 0.0 0.0 19.848992396448132 0.0 16 1.7723897130501054E-4 0.0 0.0 20.67598943655731 0.0 17 1.7723897130501054E-4 0.0 0.0 21.42411513443576 0.0 18 1.7723897130501054E-4 0.0 0.0 23.145814501692634 0.0 19 1.7723897130501054E-4 0.0 0.0 23.931160383545134 0.0 20 1.7723897130501054E-4 0.0 0.0 24.60307332376243 0.0 21 1.7723897130501054E-4 0.0 0.0 24.873539993973875 0.0 22 1.7723897130501054E-4 0.0 0.0 25.126814483968737 0.0 23 1.7723897130501054E-4 0.0 0.0 25.295900462593714 0.0 24 1.7723897130501054E-4 0.0 0.0 25.44602187128906 0.0 25 1.7723897130501054E-4 0.0 0.0 25.569380195317347 0.0 26 1.7723897130501054E-4 0.0 0.0 25.69362471420216 0.0 27 1.7723897130501054E-4 0.0 0.0 25.870686446535863 0.0 28 1.7723897130501054E-4 0.0 0.0 26.071143723081832 0.0 29 3.544779426100211E-4 0.0 0.0 26.229063646514597 0.0 30 3.544779426100211E-4 0.0 0.0 26.395668279541304 0.0 31 3.544779426100211E-4 0.0 0.0 26.54649864412187 0.0 32 3.544779426100211E-4 0.0 0.0 26.68332712996934 0.0 33 3.544779426100211E-4 0.0 0.0 26.793569770121053 0.0 34 3.544779426100211E-4 0.0 0.0 26.928625866255473 0.0 35 3.544779426100211E-4 0.0 0.0 27.042236046861984 0.0 36 3.544779426100211E-4 0.0 0.0 27.146629800960635 0.0 37 3.544779426100211E-4 0.0 0.0 27.25013736020276 0.0 38 3.544779426100211E-4 0.0 0.0 27.34992290104748 0.0 39 3.544779426100211E-4 0.0 0.0 27.46052001914181 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AAGTATA 30 2.1635296E-6 45.000004 16 CCCTAAT 30 2.1635296E-6 45.000004 40 CGGTTGA 30 2.1635296E-6 45.000004 30 GCCGATC 30 2.1635296E-6 45.000004 9 CGCTATT 30 2.1635296E-6 45.000004 30 AGCGAAG 30 2.1635296E-6 45.000004 1 TGAGGGT 75 0.0 45.000004 4 GACGCAC 30 2.1635296E-6 45.000004 9 TCCCCGT 30 2.1635296E-6 45.000004 24 GTAAGGT 30 2.1635296E-6 45.000004 24 ATCGGCC 30 2.1635296E-6 45.000004 15 AGGTGTC 30 2.1635296E-6 45.000004 22 AATCGAG 30 2.1635296E-6 45.000004 1 TGATCCA 20 7.0302305E-4 45.0 28 AAGTATC 20 7.0302305E-4 45.0 21 GTGCAGT 20 7.0302305E-4 45.0 3 CTATGGT 20 7.0302305E-4 45.0 28 AGACTGC 35 1.2104647E-7 45.0 37 GTCGCGG 20 7.0302305E-4 45.0 36 CGAACGT 20 7.0302305E-4 45.0 17 >>END_MODULE