##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3548158_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 322063 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 27.819047826046457 30.0 25.0 31.0 16.0 33.0 2 28.67950059460416 31.0 28.0 33.0 16.0 34.0 3 26.968472007029682 31.0 25.0 33.0 16.0 34.0 4 30.818501349114925 33.0 28.0 35.0 19.0 37.0 5 32.61930740258894 35.0 32.0 35.0 28.0 37.0 6 33.76634385197927 35.0 33.0 37.0 29.0 37.0 7 33.328137662507025 35.0 32.0 36.0 28.0 37.0 8 33.57786830526947 35.0 33.0 37.0 28.0 37.0 9 35.29906260576347 37.0 35.0 39.0 30.0 39.0 10 35.62888937878614 37.0 35.0 39.0 30.0 39.0 11 35.603285692550834 37.0 35.0 39.0 30.0 39.0 12 34.368108103073 35.0 33.0 39.0 27.0 39.0 13 34.146533442214725 35.0 33.0 39.0 25.0 39.0 14 34.86056454793006 37.0 33.0 40.0 25.0 41.0 15 35.786392724404855 37.0 34.0 40.0 30.0 41.0 16 35.471802100831205 36.0 34.0 40.0 30.0 41.0 17 35.52950199184632 36.0 34.0 40.0 30.0 41.0 18 35.22189136907996 36.0 34.0 39.0 29.0 40.0 19 34.681431893759914 36.0 33.0 39.0 27.0 40.0 20 35.037051756954384 35.0 34.0 39.0 29.0 40.0 21 35.07692283807826 35.0 34.0 39.0 29.0 40.0 22 35.235525347525176 35.0 34.0 39.0 30.0 41.0 23 35.45461602233104 35.0 34.0 40.0 30.0 41.0 24 35.3383344252522 35.0 34.0 40.0 30.0 41.0 25 34.58009147278638 35.0 33.0 39.0 27.0 41.0 26 34.574039861766174 35.0 33.0 39.0 27.0 41.0 27 34.84018654735254 35.0 34.0 39.0 28.0 41.0 28 34.79751166697199 35.0 34.0 40.0 27.0 41.0 29 34.91614373585292 36.0 34.0 40.0 29.0 41.0 30 34.53806242877946 36.0 33.0 40.0 27.0 41.0 31 34.38866619263933 35.0 33.0 39.0 26.0 41.0 32 34.068980292675654 35.0 33.0 39.0 24.0 41.0 33 33.978929588310365 35.0 33.0 40.0 23.0 41.0 34 33.87371104411249 35.0 33.0 40.0 23.0 41.0 35 33.705479983729894 35.0 33.0 40.0 21.0 41.0 36 33.446319508915956 35.0 33.0 40.0 19.0 41.0 37 33.326970189062386 35.0 33.0 40.0 18.0 41.0 38 33.24358898724784 35.0 33.0 40.0 18.0 41.0 39 33.13590198191037 35.0 33.0 40.0 18.0 41.0 40 33.001502811561714 35.0 32.0 40.0 18.0 41.0 41 32.969313457304935 35.0 32.0 40.0 18.0 41.0 42 32.98504019399931 35.0 32.0 39.0 18.0 41.0 43 32.946156497331266 35.0 32.0 39.0 18.0 41.0 44 32.798644985608405 35.0 32.0 39.0 18.0 41.0 45 32.67375948184051 35.0 32.0 39.0 18.0 40.0 46 32.59822146598647 35.0 32.0 39.0 18.0 40.0 47 32.63635686185622 35.0 32.0 39.0 18.0 40.0 48 32.538897669089586 35.0 32.0 39.0 17.0 40.0 49 32.54924347099791 35.0 32.0 39.0 17.0 40.0 50 32.35189077913328 35.0 32.0 39.0 15.0 40.0 51 30.84542775792314 34.0 29.0 37.0 11.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 18.0 9 52.0 10 62.0 11 56.0 12 60.0 13 56.0 14 65.0 15 109.0 16 226.0 17 351.0 18 683.0 19 1070.0 20 1649.0 21 2206.0 22 3081.0 23 4285.0 24 5730.0 25 7372.0 26 8383.0 27 8681.0 28 9082.0 29 9981.0 30 11880.0 31 15044.0 32 19941.0 33 27843.0 34 38913.0 35 32469.0 36 28255.0 37 33700.0 38 36119.0 39 14640.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 20.423954319496495 3.4139283307924226 48.6476248435865 27.514492506124576 2 24.62033825680069 5.038144710817448 50.74038309274893 19.601133939632927 3 22.322651158313747 4.057591216625318 53.13929262287193 20.480465002189014 4 18.55196033074274 4.278976473547101 52.175195536277066 24.993867659433093 5 16.48217895256518 5.9631190170867185 55.380158540409795 22.1745434899383 6 19.36950224024492 7.090227688371529 57.92779673542133 15.612473335962218 7 80.8686499225307 1.9940198035788028 14.574788162564467 2.562542111326045 8 83.12410925812651 3.0195955449710152 11.91164461611548 1.944650580786989 9 78.87959809105672 4.582022771942135 12.798738135085372 3.7396410019157744 10 49.43225393789414 22.530374491947228 18.14334462511993 9.894026945038704 11 44.12552823515896 18.321881122637496 24.95039790351577 12.602192738687773 12 38.994234047375826 19.939577039274926 28.368673209899924 12.697515703449325 13 21.788283658787254 35.94079419244061 29.52372672427444 12.747195424497693 14 15.507214426990993 38.17576064310399 31.013807857468876 15.303217072436137 15 13.819035406116194 21.40109233286655 50.71864821479027 14.06122404622698 16 16.154603291902518 16.579364906866047 49.87999242384254 17.386039377388897 17 16.793608703887127 16.70946367636146 34.283354498964485 32.213573120786926 18 20.955527334714017 20.963910787640927 36.768582544409014 21.311979333236046 19 26.53859648578073 21.08034763384804 32.9621844173345 19.418871463036737 20 29.919612001378614 20.761776422625385 30.56793236105979 18.75067921493621 21 24.255502805351746 24.437144285434837 32.92150914572615 18.385843763487266 22 23.155407482386988 22.54279442220932 31.443847942793802 22.85795015260989 23 20.24728081151824 26.710923018167254 30.651456392072358 22.390339778242147 24 20.008818150486086 22.051275682087045 39.67174124317292 18.26816492425395 25 17.160617643131935 23.24979895237888 38.156509751197746 21.433073653291437 26 17.21961231187687 29.923958976970344 32.911573201516475 19.944855509636312 27 18.57183221916209 29.985127133511146 32.803830306492834 18.639210340833937 28 15.63855518951261 27.455808335636195 41.60614538149368 15.299491093357512 29 16.024194024150553 23.977917363994 39.62547700294663 20.372411608908816 30 17.919164883889177 26.245796629851924 37.64977659650441 18.18526188975449 31 26.572751294001485 24.9944886559462 29.84012444770123 18.592635602351095 32 26.91771485703108 25.248165731549417 30.193471463657733 17.640647947761774 33 25.726022548383394 25.31523335496471 29.4700105258909 19.488733570761 34 21.448909064375606 26.945349201864232 30.94736123056669 20.658380503193474 35 19.24716592716332 25.626663106286657 32.94293352542825 22.18323744112177 36 28.548762198700256 24.03722253099549 28.079288834793193 19.334726435511065 37 22.020225856431814 29.091202652897103 31.045478679637213 17.843092811033866 38 21.397366353787923 30.998282944641264 26.938518240220084 20.665832461350732 39 20.76798638775643 29.779266789416976 28.98935922474795 20.463387598078636 40 22.784983062320105 26.14333220518967 27.53498539105703 23.5366993414332 41 18.472162278808803 25.849911352747757 27.924350204773603 27.75357616366984 42 22.623834467169466 26.519966590387593 26.599143645808425 24.25705529663451 43 23.107590750877936 28.04761801262486 25.651502966810842 23.193288269686366 44 21.06016524717214 31.004182411515757 28.44878176009042 19.486870581221684 45 17.237621210756902 34.02067297392125 26.06073966894676 22.680966146375088 46 21.598258725777256 31.314370169811497 27.736188261302914 19.351182843108337 47 22.31768318620891 26.832327836479198 28.885652807059486 21.964336170252405 48 24.50949037921152 23.61711838988024 29.84602391457572 22.02736731633252 49 21.74916087846167 23.646615724252708 32.188733260262744 22.415490137022882 50 20.168414254353962 31.287046323234897 27.35862238133533 21.185917041075815 51 20.434821758475827 31.726401356256385 24.729944141363646 23.10883274390414 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 6.0 1 97.5 2 189.0 3 1966.5 4 3744.0 5 3350.0 6 2956.0 7 2974.0 8 2992.0 9 3110.0 10 3228.0 11 3171.0 12 3114.0 13 3034.5 14 2955.0 15 2823.5 16 2692.0 17 2499.0 18 2306.0 19 2198.0 20 2090.0 21 2061.0 22 2032.0 23 2175.0 24 2318.0 25 2250.0 26 2244.5 27 2307.0 28 2466.0 29 2625.0 30 3159.0 31 3693.0 32 4603.5 33 5514.0 34 6384.0 35 7254.0 36 8205.0 37 9156.0 38 10868.5 39 12581.0 40 16819.0 41 21057.0 42 24774.5 43 28492.0 44 28701.5 45 28911.0 46 28664.0 47 28417.0 48 26647.0 49 24877.0 50 23787.0 51 22697.0 52 20938.5 53 19180.0 54 18238.5 55 17297.0 56 15571.0 57 13845.0 58 12835.0 59 11825.0 60 10514.0 61 9203.0 62 8192.5 63 7182.0 64 6131.0 65 5080.0 66 4000.5 67 2921.0 68 2415.5 69 1910.0 70 1612.5 71 1315.0 72 1058.0 73 801.0 74 593.5 75 348.5 76 311.0 77 217.0 78 123.0 79 131.0 80 139.0 81 115.5 82 92.0 83 63.0 84 34.0 85 29.0 86 24.0 87 16.0 88 8.0 89 4.0 90 0.0 91 0.5 92 1.0 93 0.5 94 0.0 95 0.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 322063.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 31.870392735389895 #Duplication Level Percentage of deduplicated Percentage of total 1 79.95874489431749 25.483166024107508 2 8.41779187427808 5.365566659960325 3 2.8577504645252736 2.7323288893249016 4 1.4704719555730106 1.874580749219546 5 0.9056584705756558 1.4431845570689354 6 0.629761761569015 1.2042452802561288 7 0.4768195817975963 1.0637499135069637 8 0.3728589163092023 0.9506528078132922 9 0.2848922013707024 0.8171663710440662 >10 3.309747644615133 26.03718252282651 >50 1.1735559452665834 25.64564354817075 >100 0.13794780276557794 6.309543851122642 >500 0.002998865277512564 0.647680012589363 >1k 9.996217591708547E-4 0.42530881298907997 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1335 0.4145151724973064 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCAAGATGGCTCGTATGC 825 0.2561610616556388 No Hit TTTTTTGGGGGGAATTCTGGACATTAATTAGGGCTGAAAGCCCTAACTTAA 658 0.20430785281140645 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 550 0.1707740411037592 No Hit GAATCTGTCTCTTATACACATCTGACGCAAGATGGCTCGTATGCCGTCTTC 497 0.15431763350648786 No Hit TTCTTTGGGGGGAATTCTGGACATTAATTAGGGCTGAAAGCCCTAACTTAA 443 0.13755072765266424 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCAAGATGGCTCGTATGCCG 435 0.1350667416002459 No Hit TTTTCTGGGGGGAATTCTGGACATTAATTAGGGCTGAAAGCCCTAACTTAA 386 0.11985232702918372 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.010556940722777842 0.0 2 0.0 0.0 0.0 0.14251869975750087 0.0 3 0.0 0.0 0.0 0.1530756404802787 0.0 4 0.0 0.0 0.0 0.24312013488044265 0.0 5 0.0 0.0 0.0 0.528778530908549 0.0 6 0.0 3.104982565522895E-4 0.0 0.5765952624176015 0.0 7 0.0 3.104982565522895E-4 0.0 0.6430418893197914 0.0 8 0.0 3.104982565522895E-4 0.0 0.7340178784896123 0.0 9 0.0 3.104982565522895E-4 0.0 0.7604102302965569 0.0 10 0.0 3.104982565522895E-4 0.0 0.9895579436321466 0.0 11 0.0 3.104982565522895E-4 0.0 1.069355995566085 0.0 12 0.0 3.104982565522895E-4 0.0 1.5298249100331303 0.0 13 0.0 3.104982565522895E-4 0.0 1.6198694044332942 0.0 14 0.0 3.104982565522895E-4 0.0 1.6558872021933597 0.0 15 0.0 3.104982565522895E-4 0.0 1.6816585574871996 0.0 16 0.0 3.104982565522895E-4 0.0 1.7263703064307294 0.0 17 0.0 3.104982565522895E-4 0.0 1.7856754734322167 0.0 18 0.0 3.104982565522895E-4 0.0 1.8772724591151422 0.0 19 0.0 3.104982565522895E-4 0.0 1.9567600127925282 0.0 20 0.0 3.104982565522895E-4 0.0 2.0008507652229532 0.0 21 0.0 3.104982565522895E-4 0.0 2.0430785281140644 0.0 22 0.0 3.104982565522895E-4 0.0 2.0744388520258457 0.0 23 0.0 3.104982565522895E-4 0.0 2.113251134094882 0.0 24 0.0 3.104982565522895E-4 0.0 2.1405749806714836 0.0 25 0.0 3.104982565522895E-4 0.0 2.1703828133005034 0.0 26 0.0 3.104982565522895E-4 0.0 2.194601677311582 0.0 27 0.0 3.104982565522895E-4 0.0 2.221615025631631 0.0 28 0.0 3.104982565522895E-4 0.0 2.248317875695128 0.0 29 0.0 3.104982565522895E-4 0.0 2.279367701350357 0.0 30 0.0 3.104982565522895E-4 0.0 2.31507500085387 0.0 31 0.0 3.104982565522895E-4 0.0 2.3551292759491154 0.0 32 0.0 3.104982565522895E-4 0.0 2.3827636207822693 0.0 33 0.0 3.104982565522895E-4 0.0 2.410397965615423 0.0 34 0.0 3.104982565522895E-4 0.0 2.4448632720927272 0.0 35 0.0 3.104982565522895E-4 0.0 2.4861595402141816 0.0 36 0.0 3.104982565522895E-4 0.0 2.527455808335636 0.0 37 0.0 3.104982565522895E-4 0.0 2.5640946026088063 0.0 38 0.0 3.104982565522895E-4 0.0 2.5976284143164534 0.0 39 0.0 3.104982565522895E-4 0.0 2.6361301981289373 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTACCTA 25 3.8845315E-5 45.000004 25 CGAACAA 25 3.8845315E-5 45.000004 36 CGTATTA 25 3.8845315E-5 45.000004 34 TTAGCGA 25 3.8845315E-5 45.000004 22 GGTCATA 25 3.8845315E-5 45.000004 8 GTGATAA 25 3.8845315E-5 45.000004 28 ATAGACG 25 3.8845315E-5 45.000004 14 CGTTCGG 25 3.8845315E-5 45.000004 2 TATTGCG 25 3.8845315E-5 45.000004 1 CCGTATT 25 3.8845315E-5 45.000004 33 CCCGTAT 25 3.8845315E-5 45.000004 32 CCCCGTA 25 3.8845315E-5 45.000004 31 TAACCGT 25 3.8845315E-5 45.000004 39 CTACGAA 35 1.2082819E-7 45.000004 11 TACGAAT 35 1.2082819E-7 45.000004 12 CGAATAC 25 3.8845315E-5 45.000004 14 TAGGGCG 35 1.2082819E-7 45.000004 5 CCGACCT 25 3.8845315E-5 45.000004 21 ATGCGAA 25 3.8845315E-5 45.000004 33 CGCGTCG 25 3.8845315E-5 45.000004 15 >>END_MODULE