##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3548155_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 744369 Sequences flagged as poor quality 0 Sequence length 51 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 27.69634146505295 30.0 25.0 31.0 16.0 33.0 2 28.470743676859193 31.0 28.0 33.0 16.0 34.0 3 26.33383711573158 30.0 19.0 33.0 10.0 34.0 4 30.310359512553585 33.0 28.0 35.0 19.0 37.0 5 32.446421062671874 35.0 32.0 35.0 28.0 37.0 6 33.67480107312368 35.0 33.0 37.0 29.0 37.0 7 33.48003073744339 35.0 32.0 35.0 29.0 37.0 8 33.577682574099676 35.0 33.0 37.0 28.0 37.0 9 35.345606815974335 37.0 35.0 39.0 30.0 39.0 10 35.65512803461724 37.0 35.0 39.0 30.0 39.0 11 35.630941105822515 37.0 35.0 39.0 30.0 39.0 12 34.42928305719341 35.0 33.0 39.0 27.0 39.0 13 34.17825836379538 37.0 33.0 39.0 25.0 39.0 14 35.02693825239901 37.0 33.0 40.0 25.0 41.0 15 35.90325497166056 38.0 34.0 40.0 30.0 41.0 16 35.692097602130126 37.0 34.0 40.0 30.0 41.0 17 35.61471796917927 37.0 34.0 40.0 30.0 41.0 18 35.312711840498466 37.0 34.0 39.0 29.0 40.0 19 34.58508212996511 36.0 33.0 39.0 27.0 40.0 20 34.77414964889726 35.0 34.0 39.0 29.0 40.0 21 34.921576529919975 35.0 34.0 39.0 29.0 40.0 22 35.06720725876548 35.0 33.0 39.0 29.0 40.0 23 35.329814917063985 35.0 34.0 39.0 30.0 41.0 24 35.19411071659352 35.0 34.0 40.0 29.0 41.0 25 34.4954411051508 35.0 33.0 39.0 27.0 40.0 26 34.41818641023471 35.0 33.0 39.0 25.0 40.0 27 34.72043166762721 35.0 33.0 39.0 27.0 41.0 28 34.61612049937598 35.0 33.0 39.0 27.0 41.0 29 34.6542588420528 35.0 34.0 40.0 27.0 41.0 30 34.261418731838646 35.0 33.0 39.0 24.0 41.0 31 34.05841860690061 35.0 33.0 39.0 24.0 41.0 32 33.573264066612126 35.0 33.0 39.0 22.0 41.0 33 33.327074340817525 35.0 33.0 40.0 19.0 41.0 34 33.107317741603964 35.0 33.0 40.0 18.0 41.0 35 32.858036807013725 35.0 33.0 40.0 15.0 41.0 36 32.58698172546143 35.0 32.0 40.0 13.0 41.0 37 32.450501028387805 35.0 32.0 40.0 12.0 41.0 38 32.37239191852428 35.0 31.0 40.0 12.0 41.0 39 32.18744869815911 35.0 31.0 40.0 10.0 41.0 40 32.086623704103744 35.0 31.0 39.0 10.0 41.0 41 31.991195227098387 35.0 31.0 39.0 10.0 41.0 42 31.995909286926242 35.0 31.0 39.0 10.0 41.0 43 31.95417595305554 35.0 31.0 39.0 10.0 41.0 44 31.79052862222903 35.0 31.0 39.0 10.0 41.0 45 31.749061285464602 35.0 30.0 39.0 10.0 40.0 46 31.565998852719552 35.0 30.0 39.0 10.0 40.0 47 31.630179386836367 35.0 30.0 39.0 10.0 40.0 48 31.525810451536806 35.0 30.0 39.0 10.0 40.0 49 31.57531949879697 35.0 30.0 39.0 10.0 40.0 50 31.42614079844808 35.0 30.0 39.0 10.0 40.0 51 29.94343128206575 34.0 26.0 37.0 8.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 4.0 8 33.0 9 86.0 10 106.0 11 103.0 12 102.0 13 114.0 14 153.0 15 275.0 16 510.0 17 993.0 18 1844.0 19 2978.0 20 4602.0 21 6495.0 22 9109.0 23 12500.0 24 16869.0 25 21776.0 26 24375.0 27 24422.0 28 23213.0 29 24307.0 30 28026.0 31 34608.0 32 45093.0 33 61130.0 34 82938.0 35 70662.0 36 62495.0 37 73110.0 38 77799.0 39 33539.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 19.724357140074346 3.5037729943079308 47.2674171009271 29.50445276469063 2 27.480187917551646 7.176951216399393 49.220480702447304 16.122380163601655 3 18.24175912752949 6.90907332250537 54.87359092063211 19.975576629333034 4 16.80013541670865 3.5204313989432663 59.07298665043815 20.606446533909928 5 17.34892237586466 4.7837833117714466 57.87143204512816 19.99586226723574 6 17.914367739656004 8.857703638921018 59.60766770244328 13.6202609189797 7 74.86125832752305 1.7735827257717611 21.237047754541095 2.1281111921641016 8 77.23467796213974 4.6945802417886835 16.466161272164744 1.6045805239068258 9 73.79485174691584 3.185785544535036 16.779178068941615 6.240184639607507 10 47.256266717179244 21.97418215965469 21.61199620080901 9.157554922357058 11 40.18746078893667 16.743577446132228 30.948091605104455 12.120870159826644 12 35.52364485893421 17.493339996695187 32.689029231469874 14.293985912900725 13 18.86738969516463 32.3014526397526 36.211878785924725 12.619278879158053 14 14.712998526268558 34.68320147668697 36.327412882589144 14.27638711445533 15 12.59147009077487 20.239961631932548 54.03314753838486 13.135420738907719 16 14.162465121465296 16.54098975105089 51.659996587713884 17.636548539769926 17 15.627061309646157 16.063001011595055 38.68847305570221 29.621464623056575 18 19.09160644787733 18.945845407318146 42.41579109285851 19.54675705194601 19 22.868631014993905 21.127827730601357 35.20283622773114 20.8007050266736 20 26.589634979425526 19.908136958954497 36.36072969185982 17.141498369760157 21 20.523154510733253 24.01510541142901 37.42270298736245 18.039037090475286 22 20.922015828171244 19.82914387890952 37.3787731622354 21.87006713068384 23 18.72391246814416 24.51861912572931 35.0803163484777 21.677152057648826 24 18.812712512208325 19.78131813656936 42.94456109805755 18.46140825316476 25 16.183237077309776 22.2561659606996 42.18552895136686 19.375068010623764 26 15.885535265439588 28.07505417340056 35.99814070709554 20.041269854064314 27 16.206881264534122 30.142308451856536 36.32042710000014 17.330383183609204 28 14.11302727545075 25.7506693588798 44.252917571795706 15.883385793873735 29 15.018357830592086 21.661568388796418 42.457974472338314 20.862099308273184 30 14.770631232627904 26.76293612442216 39.23591659512957 19.230516047820366 31 24.203721541332325 24.723356292376497 31.64290828876538 19.4300138775258 32 24.85783260721497 24.854877083811928 33.74925608132526 16.538034227647845 33 22.42275000705295 25.62573132411479 31.600053199421257 20.351465469411004 34 19.2475774783743 25.86002372479241 32.934472015895345 21.957926780937946 35 18.42379250076239 25.609341603425186 33.01870443288208 22.948161462930347 36 25.19006030611162 22.9757015673678 30.856873405528713 20.977364720991872 37 19.602240286739505 29.248799990327377 34.08994732451244 17.059012398420677 38 18.391550427274645 28.04294644188568 29.49263067107846 24.07287245976122 39 19.870252522606396 27.578794925635002 31.988570184948596 20.56238236681001 40 20.277040016443458 24.942333708147437 31.100838428252654 23.67978784715645 41 16.503911366539985 25.58032373728621 31.0354138874671 26.880351008706704 42 19.529561279419212 25.86365095805978 30.34731430244946 24.25947346007155 43 22.11967451626814 25.516511300175047 30.18946248433237 22.17435169922444 44 19.588403063534347 29.11109946814013 30.59571261027797 20.704784858047553 45 16.904787813570955 33.23687579681583 26.608577197599576 23.249759192013638 46 22.345637714628094 29.96390231189101 29.295416654911744 18.39504331856915 47 19.763853680096837 27.80059352283612 32.60775233788618 19.827800459180864 48 20.96285578792239 25.647494723719017 30.63547783424619 22.754171654112408 49 19.617017903754725 23.01694455303754 34.5475160840927 22.818521459115036 50 19.930437726450187 28.508307035892145 30.00057767048332 21.560677567174345 51 17.67429863414516 29.30025296593491 28.363352047170153 24.662096352749778 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 29.0 1 283.5 2 538.0 3 7179.0 4 13820.0 5 12701.0 6 11582.0 7 11491.0 8 11400.0 9 11728.5 10 12057.0 11 11741.5 12 11426.0 13 10772.5 14 10119.0 15 9182.0 16 8245.0 17 7628.0 18 7011.0 19 6512.5 20 6014.0 21 5441.5 22 4869.0 23 4985.0 24 5101.0 25 5441.5 26 6529.5 27 7277.0 28 8803.0 29 10329.0 30 11893.0 31 13457.0 32 14715.5 33 15974.0 34 17035.0 35 18096.0 36 20014.5 37 21933.0 38 25823.0 39 29713.0 40 35721.5 41 41730.0 42 49776.0 43 57822.0 44 59015.0 45 60208.0 46 56692.0 47 53176.0 48 64841.5 49 76507.0 50 63928.0 51 51349.0 52 45537.5 53 39726.0 54 33949.0 55 28172.0 56 27303.5 57 26435.0 58 27355.0 59 28275.0 60 24046.5 61 19818.0 62 16730.0 63 13642.0 64 11595.0 65 9548.0 66 7613.0 67 5678.0 68 4463.5 69 3249.0 70 2560.0 71 1871.0 72 1477.0 73 1083.0 74 875.5 75 510.0 76 352.0 77 245.5 78 139.0 79 104.0 80 69.0 81 48.5 82 28.0 83 28.5 84 29.0 85 19.0 86 9.0 87 9.0 88 9.0 89 5.0 90 1.0 91 2.0 92 3.0 93 1.5 94 0.0 95 0.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 744369.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 28.653619187733963 #Duplication Level Percentage of deduplicated Percentage of total 1 83.67555112116065 23.97607377149503 2 7.196034827291944 4.123848832057886 3 2.511565323582887 2.158963090411856 4 1.209554004256559 1.3863239929986477 5 0.7544134840547017 1.0808338341097516 6 0.5445906903962633 0.9362696553479793 7 0.39120587185573363 0.7846624853311751 8 0.2951284167793639 0.6765197812699782 9 0.23118041541460313 0.5961740028256963 >10 1.6883825624556643 10.603379524593818 >50 0.7545480604259583 16.09206926329434 >100 0.7363546427252765 32.835635418611595 >500 0.00813916055027939 1.6926023697199084 >1k 0.002872644900098608 2.198681972726615 >5k 4.7877415001643467E-4 0.857962005205731 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCCACTTCCGTCGTATGC 6254 0.8401746983015145 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4465 0.5998369088449412 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCCACTTCCGTCGTATGCCG 4410 0.5924481003373328 No Hit GAATCTGTCTCTTATACACATCTGACGCCACTTCCGTCGTATGCCGTCTTC 3246 0.4360740439217646 No Hit TTTTTTGGGGGGAATTCTGGACATTAATTAGGGCTGAAAGCCCTAACTTAA 1359 0.1825707411243617 No Hit TTTTTTGGGGGGAATTCGAGCTCGCATTTTGAAAATTCTATGGAAGAGCTA 1355 0.18203337323289928 No Hit TATGAAAACTATGCCCTCGTGTACTCCTGCACCACCTTCTTCTGGCTCTTC 1192 0.16013563165580513 No Hit GAACTGTCTCTTATACACATCTGACGCCACTTCCGTCGTATGCCGTCTTCT 911 0.12238553728056917 No Hit TTCCTTGGGGTCAGAAACAAATTCTCAACAATGTATTTTTCTAATGAACCC 893 0.11996738176898822 No Hit GATTGATACGGCTGTCTCTTATACACATCTGACGCCACTTCCGTCGTATGC 887 0.11916132993179458 No Hit GAATGATCTGTCTCTTATACACATCTGACGCCACTTCCGTCGTATGCCGTC 812 0.10908568196687396 No Hit TGTTTTGGGGGGAATTCGAGCTCGCATTTTGAAAATTCTATGGAAGAGCTA 795 0.1068018684281586 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCCACTTCCGTCGTA 792 0.10639884250956179 No Hit TTCTTTGGGGGGAATTCTCTTGCTTCAACAATAACGTCTCTTTCAGAAGGC 746 0.10021911175774381 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.03640667464657985 0.0 2 0.0 0.0 0.0 0.23953173761937963 0.0 3 0.0 0.0 0.0 0.27163946913426 0.0 4 0.0 0.0 0.0 0.5188286992069794 0.0 5 0.0 0.0 0.0 1.3612872110472092 0.0 6 0.0 0.0 0.0 1.4205320210809425 0.0 7 0.0 0.0 0.0 1.6149248558174776 0.0 8 0.0 0.0 0.0 1.8482768626850392 0.0 9 0.0 0.0 0.0 1.9009389160483576 0.0 10 0.0 0.0 0.0 2.83448128549147 0.0 11 0.0 0.0 0.0 2.9338943454120203 0.0 12 0.0 0.0 0.0 4.248161865956266 0.0 13 0.0 0.0 0.0 4.376995817934385 0.0 14 0.0 0.0 0.0 4.451555612874797 0.0 15 0.0 0.0 0.0 4.642858582235424 0.0 16 0.0 0.0 0.0 4.761482544275756 0.0 17 0.0 0.0 0.0 4.85283508582437 0.0 18 0.0 0.0 0.0 4.9581591925510065 0.0 19 0.0 0.0 0.0 5.134684544896416 0.0 20 0.0 0.0 0.0 5.215155386642915 0.0 21 0.0 0.0 0.0 5.287162684098881 0.0 22 0.0 0.0 0.0 5.365349712306665 0.0 23 0.0 0.0 0.0 5.431848988875141 0.0 24 0.0 0.0 0.0 5.490825114963143 0.0 25 0.0 0.0 0.0 5.537307437574643 0.0 26 0.0 0.0 0.0 5.588760413182172 0.0 27 0.0 0.0 0.0 5.641959834436952 0.0 28 0.0 0.0 0.0 5.687904789156991 0.0 29 0.0 0.0 0.0 5.745268811570606 0.0 30 0.0 0.0 0.0 5.8084095388174415 0.0 31 0.0 0.0 0.0 5.8741027635487235 0.0 32 0.0 0.0 0.0 5.932407179772397 0.0 33 0.0 0.0 0.0 5.985069233135716 0.0 34 0.0 0.0 0.0 6.049956406029805 0.0 35 0.0 0.0 0.0 6.117799102326937 0.0 36 0.0 0.0 0.0 6.186447850461263 0.0 37 0.0 0.0 0.0 6.247976474033711 0.0 38 0.0 0.0 0.0 6.316625222168038 0.0 39 0.0 0.0 0.0 6.385542654248095 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTAGAAC 30 2.1644664E-6 45.000004 13 TCGTTAC 35 1.2111559E-7 45.000004 23 GTACCAT 35 1.2111559E-7 45.000004 10 CGAACCC 35 1.2111559E-7 45.000004 32 GCGAACC 30 2.1644664E-6 45.000004 32 GACGTCA 30 2.1644664E-6 45.000004 38 CTCCCGC 30 2.1644664E-6 45.000004 38 TACGGGA 30 2.1644664E-6 45.000004 4 TCGATGT 30 2.1644664E-6 45.000004 16 TCTAGCG 60 0.0 45.000004 1 ACGGGAT 30 2.1644664E-6 45.000004 5 CGTTACA 35 1.2111559E-7 45.000004 24 ATTCCGA 30 2.1644664E-6 45.000004 12 AACGGAT 35 1.2111559E-7 45.000004 35 CCACTAA 35 1.2111559E-7 45.000004 34 TCTACGA 35 1.2111559E-7 45.000004 28 TGATTAC 70 0.0 45.000004 19 CACTAAG 35 1.2111559E-7 45.000004 35 AACGCTA 30 2.1644664E-6 45.000004 10 TCGCTAT 30 2.1644664E-6 45.000004 23 >>END_MODULE