##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921712_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3436286 Sequences flagged as poor quality 0 Sequence length 101 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.290284045041652 31.0 31.0 34.0 26.0 34.0 2 30.346461266611684 31.0 31.0 34.0 26.0 34.0 3 30.40775011160305 33.0 31.0 34.0 26.0 34.0 4 33.85463666295529 37.0 35.0 37.0 30.0 37.0 5 33.84789711915714 37.0 35.0 37.0 30.0 37.0 6 33.89131929065276 37.0 35.0 37.0 30.0 37.0 7 33.80012635735209 37.0 35.0 37.0 29.0 37.0 8 33.7672562761074 37.0 35.0 37.0 29.0 37.0 9 35.31569694722732 39.0 37.0 39.0 29.0 39.0 10-11 35.21171855311229 39.0 35.0 39.0 29.0 39.0 12-13 35.09855888013978 39.0 35.0 39.0 28.0 39.0 14-15 36.23154417298211 40.0 36.5 41.0 27.0 41.0 16-17 36.164939559745605 40.0 36.0 41.0 27.0 41.0 18-19 36.12738637005185 40.0 36.5 41.0 27.0 41.0 20-21 36.04678801473452 40.0 36.0 41.0 27.0 41.0 22-23 35.94600594944659 40.0 36.0 41.0 27.0 41.0 24-25 35.831902379487616 40.0 36.0 41.0 27.0 41.0 26-27 35.68212482895778 40.0 36.0 41.0 26.5 41.0 28-29 35.545166496618734 40.0 36.0 41.0 25.5 41.0 30-31 35.39675350072724 40.0 35.5 41.0 25.0 41.0 32-33 35.22046156809998 39.0 35.0 41.0 24.5 41.0 34-35 35.04219584749349 39.0 35.0 41.0 24.0 41.0 36-37 35.010908434280495 39.0 35.0 41.0 24.0 41.0 38-39 35.1909525283984 39.5 35.0 41.0 24.0 41.0 40-41 35.25046299987836 40.0 35.0 41.0 24.0 41.0 42-43 35.089428528358816 40.0 35.0 41.0 23.5 41.0 44-45 34.96854307237523 40.0 35.0 41.0 23.0 41.0 46-47 34.803663170062094 39.5 35.0 41.0 22.0 41.0 48-49 34.63836261009706 39.0 35.0 41.0 20.5 41.0 50-51 32.94983624762316 37.0 32.5 39.5 17.0 40.0 52-53 33.063453827766374 37.5 32.5 39.5 16.0 40.0 54-55 33.96073144086377 38.5 34.0 40.5 18.0 41.0 56-57 33.97365411377284 38.5 34.0 41.0 17.5 41.0 58-59 33.77506106884002 38.0 34.0 40.5 14.5 41.0 60-61 33.51431210906193 37.5 34.0 40.0 13.0 41.0 62-63 33.21422998551343 37.0 33.0 40.0 10.0 41.0 64-65 32.92033666580721 36.5 33.0 40.0 8.0 41.0 66-67 32.57786429883892 36.0 33.0 39.0 7.0 41.0 68-69 32.217329552895194 35.5 32.5 39.0 2.0 41.0 70-71 31.811185681284968 35.0 32.0 38.5 2.0 40.5 72-73 31.455269148144247 35.0 32.0 37.0 2.0 40.0 74-75 31.063913917526072 35.0 32.0 37.0 2.0 39.0 76-77 30.698277151552578 35.0 31.0 36.5 2.0 39.0 78-79 30.365584238331735 35.0 31.0 36.0 2.0 38.0 80-81 30.05796752656793 35.0 31.0 35.5 2.0 37.0 82-83 29.7579441874163 35.0 31.0 35.0 2.0 37.0 84-85 29.508882991695103 35.0 31.0 35.0 2.0 36.0 86-87 29.28231381206337 35.0 30.5 35.0 2.0 36.0 88-89 29.07227949012393 34.5 30.0 35.0 2.0 36.0 90-91 28.85251038475843 34.0 30.0 35.0 2.0 35.0 92-93 28.66785389807484 34.0 30.0 35.0 2.0 35.0 94-95 28.442893577542733 34.0 30.0 35.0 2.0 35.0 96-97 28.212188100757622 34.0 29.0 35.0 2.0 35.0 98-99 27.945021456304858 34.0 29.0 35.0 2.0 35.0 100-101 26.8783443811138 33.0 26.5 35.0 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 125512.0 3 21555.0 4 14524.0 5 11075.0 6 10097.0 7 10449.0 8 10962.0 9 11821.0 10 12722.0 11 13392.0 12 13433.0 13 13502.0 14 14205.0 15 14802.0 16 14668.0 17 15376.0 18 14863.0 19 14277.0 20 14389.0 21 15266.0 22 16686.0 23 19138.0 24 22310.0 25 26394.0 26 31273.0 27 37221.0 28 43882.0 29 51986.0 30 62235.0 31 75884.0 32 94147.0 33 121926.0 34 169443.0 35 246687.0 36 413025.0 37 739548.0 38 753754.0 39 123847.0 40 10.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.365059376232914 17.637412631698478 12.729996462320806 25.267531529747806 2 16.225093046147396 19.469768010763648 38.64024486134813 25.664894081740826 3 19.300146191166792 23.429580705095724 28.948151642757715 28.322121460979773 4 13.571328517982142 15.358287231437101 36.0798385732287 34.99054567735206 5 14.700877101023869 36.781400333135316 33.96783380508089 14.549888760759922 6 34.13548194256114 34.58628125348344 16.95720215128684 14.321034652668576 7 29.44668069538188 31.267648676731252 20.89530561934449 18.390365008542382 8 27.247960448015984 33.90244903412162 19.91232596972769 18.937264548134706 9 27.272023508272685 15.300778477253207 18.92725025443334 38.49994776004077 10-11 26.02541055641019 24.769216866076004 27.612744482414932 21.592628095098874 12-13 26.588321452798358 22.21894114183247 27.291475253465887 23.901262151903286 14-15 23.74623500771776 23.690193174017317 24.519510418540793 28.04406139972413 16-17 24.14595456297945 26.628467002321877 25.31546451831033 23.910113916388347 18-19 24.154516330648242 26.180362185394273 26.361403950438707 23.303717533518775 20-21 24.67336467674109 25.40255370426833 26.253118998951418 23.670962620039163 22-23 24.523178174616405 25.22246299464383 26.00470246152158 24.249656369218194 24-25 24.327522985989493 25.363901167231806 25.989771584007155 24.318804262771547 26-27 24.10467393417791 25.534002568428356 25.989517296141184 24.371806201252546 28-29 24.251580223673173 25.802175612487655 25.773493221293016 24.17275094254616 30-31 24.510504566402414 25.52645070353259 25.658802812238562 24.304241917826438 32-33 24.271626101204593 25.58669794325395 25.574227083157496 24.567448872383956 34-35 24.620047300464172 25.600019324129832 25.634724180787128 24.145209194618868 36-37 24.6690332904136 25.42721235110445 25.722111499437105 24.181642859044842 38-39 24.434343379960456 25.56413602794863 25.673138471518293 24.328382120572623 40-41 24.636008451678514 25.400317585454218 25.724698256713985 24.23897570615328 42-43 24.48841789638635 25.381137144036348 25.61510533527104 24.515339624306264 44-45 24.365419401342386 25.426174945279755 25.751777341788042 24.456628311589814 46-47 24.51469818695363 25.445417388209517 25.563503279912553 24.476381144924297 48-49 24.318219034005534 25.465560012779175 25.63855427308509 24.5776666801302 50-51 24.33288562578842 25.57482207853331 25.712487774551356 24.379804521126918 52-53 24.580844134019646 25.373553049235444 25.65689563436325 24.388707182381665 54-55 24.105578560597223 25.29601656363 25.92590108480112 24.672503790971657 56-57 24.156864300412003 25.461009639835947 25.813506968584214 24.56861909116784 58-59 24.324676271581893 25.277166938870742 25.79189512365842 24.60626166588894 60-61 24.246912730468804 25.335523319546997 26.02518523033865 24.39237871964555 62-63 24.31232978658566 25.37712687484453 25.907010219147537 24.40353311942227 64-65 24.15073111924146 25.22345343973946 25.86494342873373 24.760872012285347 66-67 24.15345779569434 25.29206633735071 25.822345806835035 24.73213006011992 68-69 24.227606312933673 25.24485304151975 25.85450708053061 24.673033565015963 70-71 24.16607319752427 25.082919241302243 25.830333185846836 24.92067437532665 72-73 24.16763261146274 25.283069211220415 25.715870801056194 24.83342737626065 74-75 24.15646534334869 25.336213192384704 25.804073647525488 24.70324781674112 76-77 24.252627895788077 25.052878657549826 25.86499686547798 24.82949658118412 78-79 24.159695296311796 25.106207375240785 25.894549426128748 24.83954790231867 80-81 24.334569375600566 25.21182056382136 25.760973915944945 24.69263614463313 82-83 24.246406375598937 25.217393713767716 25.858651940224675 24.67754797040867 84-85 24.248696064796686 25.258989741321596 25.779120150153606 24.71319404372811 86-87 24.224164788081602 25.328402339246793 25.746985512725374 24.70044735994623 88-89 24.162019055969527 25.137014640611753 25.825110413112682 24.875855890306035 90-91 24.15867617969983 25.11716998639787 25.903456656804174 24.82069717709813 92-93 24.319165345308978 24.909678055428184 25.992462135664056 24.778694463598782 94-95 24.23618891823074 24.866102070170946 26.012019237080064 24.885689774518248 96-97 24.207153114217764 24.73184026301453 26.10118737232703 24.959819250440678 98-99 24.09425841151763 24.700295769916995 26.029065348685155 25.17638046988023 100-101 24.36960007794762 24.61948754690495 26.034578171223966 24.97633420392346 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 48.0 1 39.0 2 71.5 3 109.5 4 92.5 5 99.0 6 164.5 7 318.0 8 508.5 9 587.5 10 529.5 11 502.0 12 549.0 13 670.0 14 794.0 15 848.5 16 959.0 17 1060.0 18 1155.5 19 1332.0 20 1439.0 21 1559.0 22 1716.5 23 1865.5 24 2099.0 25 2415.0 26 2908.5 27 3662.5 28 4866.0 29 6778.0 30 9752.5 31 14397.0 32 21075.5 33 27139.0 34 32845.5 35 40374.0 36 49621.0 37 59174.5 38 68470.5 39 77998.0 40 86923.0 41 95361.5 42 104223.0 43 112845.0 44 120851.5 45 130561.0 46 138458.5 47 144173.0 48 150214.5 49 153646.0 50 153765.5 51 154081.5 52 154139.0 53 153466.0 54 151171.0 55 144595.5 56 134944.0 57 122286.5 58 111053.5 59 98201.0 60 81934.0 61 68757.0 62 57037.5 63 43880.5 64 31864.5 65 23425.5 66 17722.0 67 13742.5 68 10480.5 69 7972.5 70 6110.0 71 4577.0 72 3332.5 73 2538.5 74 1975.0 75 1486.0 76 1113.0 77 735.5 78 490.0 79 324.5 80 237.5 81 183.0 82 143.0 83 102.0 84 81.0 85 69.0 86 66.0 87 60.0 88 53.0 89 43.0 90 35.5 91 35.5 92 31.5 93 25.5 94 21.5 95 19.0 96 15.0 97 12.0 98 8.0 99 8.0 100 6.5 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.05328427261293152 2 0.07292757354888388 3 0.07059947862314138 4 0.07004655607827755 5 0.06536126504022075 6 0.011320361576422917 7 0.013852164808167889 8 0.01760621787592767 9 0.006373159859220099 10-11 0.01252806081915184 12-13 0.022247857134126785 14-15 0.039344804245048284 16-17 0.02664213630646576 18-19 0.009850751654547962 20-21 0.020036166954671412 22-23 0.0371476646588788 24-25 0.03346636455754847 26-27 0.021011056704826083 28-29 0.011058450897276886 30-31 0.01092749555770387 32-33 0.008031927493811633 34-35 0.004874448750773364 36-37 7.711814441522039E-4 38-39 0.003623097728186769 40-41 0.0013241039890160482 42-43 0.22781863907718972 44-45 0.19778621453511147 46-47 0.2037810589688984 48-49 0.21158017697013579 50-51 0.2026606632858848 52-53 0.2101542188281185 54-55 0.20621100804764214 56-57 0.20900472195853315 58-59 0.21785148267635465 60-61 0.22260952668084086 62-63 0.2076369661896594 64-65 0.20836449585395395 66-67 0.20535252304377458 68-69 0.20027436598699877 70-71 0.19187867366103986 72-73 0.20373740718904074 74-75 0.20229689845373758 76-77 0.1960255927475187 78-79 0.21479585808631763 80-81 0.2251122287260141 82-83 0.22448655321472077 84-85 0.21914648547879892 86-87 0.23787309903774015 88-89 0.23023403756264757 90-91 0.23708736700030208 92-93 0.23263488545481956 94-95 0.23615612903000507 96-97 0.24266024422879817 98-99 0.23614157843671918 100-101 0.24279119956837122 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 3436286.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 58.22466110025276 #Duplication Level Percentage of deduplicated Percentage of total 1 77.84733511125351 45.32634704410543 2 11.990185047125387 13.962489217963878 3 4.075170299990074 7.118262289282121 4 1.8833807452839535 4.386368224675985 5 1.0347853777309413 3.012501396494055 6 0.6879622971960743 2.4033822962395672 7 0.466230527043938 1.9002280102207862 8 0.3265160672574619 1.5209029887882444 9 0.2543312013984836 1.3327513207782153 >10 1.3512687627826734 13.936845113783242 >50 0.063799316519534 2.4981476783258723 >100 0.017280942087029523 1.6349398142212015 >500 0.0011027055832278773 0.4345779879383771 >1k 6.515987477199881E-4 0.5322566171830319 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 2.9101186571781277E-5 3 0.0 0.0 0.0 0.0 2.9101186571781277E-5 4 0.0 0.0 0.0 0.0 2.9101186571781277E-5 5 0.0 0.0 0.0 0.0 5.8202373143562554E-5 6 0.0 0.0 0.0 0.0 5.8202373143562554E-5 7 0.0 0.0 0.0 0.0 5.8202373143562554E-5 8 0.0 0.0 0.0 0.0 5.8202373143562554E-5 9 0.0 0.0 0.0 0.0 8.730355971534383E-5 10-11 0.0 0.0 0.0 0.0 8.730355971534383E-5 12-13 1.4550593285890638E-5 0.0 0.0 0.0 1.1640474628712511E-4 14-15 2.9101186571781277E-5 1.4550593285890638E-5 0.0 0.0 2.1825889928835958E-4 16-17 2.9101186571781277E-5 2.9101186571781277E-5 0.0 0.0 2.619106791460315E-4 18-19 2.9101186571781277E-5 2.9101186571781277E-5 0.0 0.0 2.619106791460315E-4 20-21 2.9101186571781277E-5 2.9101186571781277E-5 0.0 0.0 2.9101186571781274E-4 22-23 2.9101186571781277E-5 2.9101186571781277E-5 0.0 7.275296642945319E-5 3.6376483214726595E-4 24-25 2.9101186571781277E-5 2.9101186571781277E-5 0.0 2.4736008586014085E-4 4.074166120049379E-4 26-27 2.9101186571781277E-5 2.9101186571781277E-5 0.0 4.656189851485005E-4 4.2196720529082853E-4 28-29 2.9101186571781277E-5 2.9101186571781277E-5 0.0 0.0025609044183167525 4.3651779857671916E-4 30-31 2.9101186571781277E-5 2.9101186571781277E-5 0.0 0.011494968695853605 4.510683918626098E-4 32-33 5.8202373143562554E-5 2.9101186571781277E-5 0.0 0.03301529616568586 5.383719515779536E-4 34-35 5.8202373143562554E-5 2.9101186571781277E-5 0.0 0.0631059230809077 5.529225448638443E-4 36-37 5.8202373143562554E-5 5.8202373143562554E-5 0.0 0.1105117560063394 5.529225448638443E-4 38-39 5.8202373143562554E-5 8.730355971534383E-5 0.0 0.19110749221688766 5.529225448638443E-4 40-41 5.8202373143562554E-5 8.730355971534383E-5 0.0 0.2837220184815816 5.529225448638443E-4 42-43 5.8202373143562554E-5 1.1640474628712511E-4 0.0 0.38167661248219736 5.529225448638443E-4 44-45 5.8202373143562554E-5 1.1640474628712511E-4 0.0 0.49921630504562187 5.674731381497349E-4 46-47 5.8202373143562554E-5 1.3095533957301574E-4 0.0 0.6368503669368615 6.111249180074069E-4 48-49 5.8202373143562554E-5 1.8915771271657832E-4 0.0 0.7813232076724697 6.402261045791881E-4 50-51 5.8202373143562554E-5 2.1825889928835958E-4 0.0 0.9363743297269203 6.402261045791881E-4 52-53 5.8202373143562554E-5 2.3280949257425021E-4 0.0 1.0953104601887038 7.566308508663133E-4 54-55 5.8202373143562554E-5 2.4736008586014085E-4 0.0 1.2763052900718974 8.875861904393289E-4 56-57 5.8202373143562554E-5 2.619106791460315E-4 0.0 1.483767649142126 9.166873770111103E-4 58-59 5.8202373143562554E-5 2.619106791460315E-4 0.0 1.7048784647145203 9.312379702970009E-4 60-61 5.8202373143562554E-5 2.910118657178128E-4 0.0 1.9400597039943708 9.312379702970009E-4 62-63 5.8202373143562554E-5 2.910118657178128E-4 0.0 2.185935629339351 9.603391568687821E-4 64-65 5.8202373143562554E-5 2.910118657178128E-4 0.0 2.446158439664219 9.894403434405634E-4 66-67 5.8202373143562554E-5 3.7831542543315664E-4 0.0 2.749363702555608 0.001003990936726454 68-69 5.8202373143562554E-5 4.074166120049379E-4 0.0 3.0797931254848985 0.0010185415300123448 70-71 5.8202373143562554E-5 4.3651779857671916E-4 0.0 3.425107805345655 0.0010185415300123448 72-73 5.8202373143562554E-5 4.6561898514850043E-4 0.0 3.784842123152729 0.0011349462762994698 74-75 5.8202373143562554E-5 4.6561898514850043E-4 0.0 4.1683230092023775 0.0011640474628712512 76-77 5.8202373143562554E-5 4.6561898514850043E-4 0.0 4.589926449661059 0.0011640474628712512 78-79 8.730355971534383E-5 4.6561898514850043E-4 0.0 5.061904044075494 0.0011640474628712512 80-81 8.730355971534383E-5 4.6561898514850043E-4 0.0 5.551298698653139 0.0011785980561571418 82-83 8.730355971534383E-5 4.8016957843439106E-4 0.0 6.058081312207424 0.0012222498360148137 84-85 8.730355971534383E-5 4.947201717202817E-4 0.0 6.592146288172755 0.0012222498360148137 86-87 8.730355971534383E-5 4.947201717202817E-4 0.0 7.158440828266332 0.0012222498360148137 88-89 8.730355971534383E-5 4.947201717202817E-4 0.0 7.761577470559784 0.0012368004293007043 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 2515 0.0 46.235973 1 GTATCAA 4455 0.0 43.041317 1 TCAACGC 5285 0.0 35.564342 4 CAACGCA 5505 0.0 34.05436 5 ATCAACG 5655 0.0 33.32134 3 TATCAAC 5680 0.0 32.92447 2 AACGCAG 6130 0.0 30.9518 6 GTACATG 9220 0.0 28.51877 1 TACATGG 9595 0.0 27.009626 2 ACATGGG 10030 0.0 25.553915 3 ACGCAGA 7145 0.0 25.429987 7 CGTATAC 230 1.364242E-10 24.76384 3 CGCAGAG 7450 0.0 24.072252 8 CATGGGG 8585 0.0 23.110031 4 GCAGAGT 8505 0.0 19.525127 9 ATGGGGG 5110 0.0 18.668446 5 AGAGTAC 7025 0.0 18.235895 10-11 GAGTACA 6840 0.0 17.555628 1 TAAGGTA 930 0.0 17.35244 4 TAATACA 1180 0.0 17.296213 4 >>END_MODULE