##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921712_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3436286 Sequences flagged as poor quality 0 Sequence length 101 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.313963389543247 33.0 31.0 34.0 28.0 34.0 2 31.453460218386944 34.0 31.0 34.0 28.0 34.0 3 31.52644133811912 34.0 31.0 34.0 28.0 34.0 4 35.00050927076501 37.0 35.0 37.0 32.0 37.0 5 34.73258977861563 37.0 35.0 37.0 32.0 37.0 6 34.70354213822714 37.0 35.0 37.0 32.0 37.0 7 34.58828368767908 37.0 35.0 37.0 32.0 37.0 8 34.53170865288861 37.0 35.0 37.0 32.0 37.0 9 36.11698240484058 39.0 37.0 39.0 32.0 39.0 10-11 36.00768285876089 39.0 37.0 39.0 31.0 39.0 12-13 35.92503374282583 39.0 37.0 39.0 31.0 39.0 14-15 37.16039671901582 40.0 38.0 41.0 31.0 41.0 16-17 37.123996227322166 40.0 38.0 41.0 31.0 41.0 18-19 37.0782392676279 40.0 38.0 41.0 31.0 41.0 20-21 37.01676897673826 40.0 38.0 41.0 31.0 41.0 22-23 36.92488619980991 40.0 37.0 41.0 30.0 41.0 24-25 36.83673332196447 40.0 37.0 41.0 30.0 41.0 26-27 36.70565182874766 40.0 37.0 41.0 30.0 41.0 28-29 36.58322342785205 40.0 37.0 41.0 30.0 41.0 30-31 36.42697842961849 40.0 37.0 41.0 30.0 41.0 32-33 36.37849599829583 40.0 36.5 41.0 29.5 41.0 34-35 36.50801330273441 40.0 37.0 41.0 30.0 41.0 36-37 36.50250095597398 40.0 37.0 41.0 30.0 41.0 38-39 36.394100927571216 40.0 37.0 41.0 29.5 41.0 40-41 36.31059943788148 40.0 37.0 41.0 29.0 41.0 42-43 36.18498576660965 40.0 36.0 41.0 29.0 41.0 44-45 36.05119582595861 40.0 36.0 41.0 28.0 41.0 46-47 35.89022683210885 40.0 36.0 41.0 28.0 41.0 48-49 35.74225733830071 40.0 35.0 41.0 27.0 41.0 50-51 35.580165475167085 39.5 35.0 41.0 27.0 41.0 52-53 35.39682538065807 39.0 35.0 41.0 26.5 41.0 54-55 35.17497583146455 39.0 35.0 41.0 26.0 41.0 56-57 34.94142003896067 39.0 35.0 41.0 26.0 41.0 58-59 34.69537227110898 38.0 35.0 40.0 26.0 41.0 60-61 34.409674573071044 38.0 34.0 40.0 25.0 41.0 62-63 34.100467481461095 37.0 34.0 40.0 24.5 41.0 64-65 33.757152053117814 37.0 34.0 40.0 23.0 41.0 66-67 33.404780335513394 36.0 34.0 39.0 22.5 41.0 68-69 33.040070442332215 36.0 33.0 39.0 22.0 40.5 70-71 32.64329598875065 35.0 33.0 38.5 21.5 40.0 72-73 32.28618412437149 35.0 33.0 37.0 20.0 39.5 74-75 31.886569685992377 35.0 33.0 37.0 19.5 39.0 76-77 29.209494494928535 33.0 29.0 34.5 12.5 36.5 78-79 30.775226072567882 34.5 31.5 35.5 14.0 37.0 80-81 30.961715497487695 35.0 32.0 35.0 16.5 37.0 82-83 30.793066409489782 35.0 32.0 35.0 13.5 37.0 84-85 30.603358538841064 35.0 32.0 35.0 10.5 36.0 86-87 30.403316254816975 35.0 32.0 35.0 7.0 36.0 88-89 30.144740280640203 35.0 31.5 35.0 2.0 35.5 90-91 29.950986326516478 34.0 31.0 35.0 2.0 35.0 92-93 29.795771219275693 34.0 31.0 35.0 2.0 35.0 94-95 29.691694754161908 34.0 31.0 35.0 2.0 35.0 96-97 29.487102208605457 34.0 31.0 35.0 2.0 35.0 98-99 29.28651864251113 34.0 31.0 35.0 2.0 35.0 100-101 28.176272871350058 33.0 28.5 34.5 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 69726.0 3 23515.0 4 12770.0 5 8965.0 6 7795.0 7 7758.0 8 8141.0 9 8776.0 10 9754.0 11 10463.0 12 10890.0 13 11670.0 14 12340.0 15 13328.0 16 14009.0 17 14625.0 18 14008.0 19 13176.0 20 12568.0 21 12402.0 22 13289.0 23 14786.0 24 17695.0 25 20925.0 26 25746.0 27 30872.0 28 37091.0 29 44723.0 30 54770.0 31 67668.0 32 86214.0 33 113569.0 34 162650.0 35 245164.0 36 434874.0 37 835453.0 38 838274.0 39 95841.0 40 3.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.06642640149663 19.251402210773804 13.348008863616093 26.33416252411348 2 15.23108406120336 20.80795464400186 37.161472777845354 26.79948851694942 3 17.842136588333048 24.635988061508552 28.840799256099853 28.68107609405855 4 13.208208299974128 16.61665332298434 35.0445259907866 35.13061238625493 5 14.387971334260913 37.12344198447951 34.08914672270962 14.399439958549948 6 34.03774087871531 35.18656105064255 16.759108334417373 14.016589736224766 7 29.302042961499712 31.41778652882793 20.930359114462533 18.349811395209827 8 27.0943105434181 34.40845727043674 19.727781680570246 18.769450505574913 9 26.93476441411711 15.315148573284395 18.906790009207622 38.84329700339087 10-11 25.904828342393433 25.099318505457752 27.58818420587558 21.407668946273237 12-13 26.417153943911874 22.392980646753415 27.409435984530905 23.780429424803806 14-15 23.555339678395093 23.86700020270012 24.55570040602594 28.021959712878854 16-17 24.006805603491678 26.866375499594618 25.306522798160575 23.82029609875313 18-19 24.028369430021353 26.355466478708962 26.421017893426352 23.195146197843336 20-21 24.590050868962948 25.53496804684135 26.285488958990538 23.589492125205165 22-23 24.384640859346398 25.324798343327654 26.06884293100167 24.221717866324283 24-25 24.222288767264725 25.54126292208206 26.010420022413843 24.22602828823937 26-27 24.000790410079066 25.733683022858738 26.04936687163199 24.2161596954302 28-29 24.17204690362749 25.91842605714399 25.825981389708332 24.08354564952019 30-31 24.39156466774688 25.663634519385788 25.682407773116644 24.26239303975069 32-33 24.20556384710131 25.732880157024546 25.565238295920484 24.496317699953664 34-35 24.477824009741745 25.746605472252167 25.710239819763736 24.065330698242356 36-37 24.57201460818001 25.582591249468518 25.760828157735517 24.084565984615953 38-39 24.379984669494913 25.69368498431155 25.688606827254773 24.23772351893876 40-41 24.527908183807583 25.527218607813147 25.72038428255649 24.22448892582278 42-43 24.402837404542606 25.513517776852275 25.58651054131353 24.497134277291597 44-45 24.330507952939655 25.525336966956157 25.720342491457863 24.423812588646314 46-47 24.469692229564064 25.571225479568067 25.548569408046472 24.4105128828214 48-49 24.24556478868218 25.612402220898005 25.62199186699059 24.520041123429223 50-51 24.26801761655573 25.67254898907936 25.68354951451451 24.3758838798504 52-53 24.520424362270695 25.508764730961246 25.586524708145447 24.38428619862261 54-55 24.065934001972565 25.443907438972822 25.801751562002984 24.688406997051626 56-57 24.076698261691558 25.572514307400734 25.710175018277155 24.64061241263056 58-59 24.212616730963987 25.443067946374736 25.687615577643363 24.65669974501791 60-61 24.154503467463094 25.469908660137687 25.88867884250164 24.486909029897582 62-63 24.15350458771675 25.5761079250451 25.768567172628988 24.501820314609162 64-65 23.97479063768711 25.377012287344225 25.715005233148027 24.93319184182064 66-67 23.977071706969777 25.50693978338383 25.655126325460042 24.86086218418635 68-69 24.055274179906043 25.465706220528954 25.64999716117123 24.82902243839378 70-71 24.01778790165255 25.31996352842404 25.628125630659188 25.034122939264225 72-73 23.970731544010032 25.53469006338248 25.486918493579875 25.00765989902761 74-75 23.906912446018232 25.629482227698368 25.505126402951007 24.958478923332393 76-77 23.973520403006948 25.283747989114275 25.66156335673649 25.081168251142287 78-79 23.831901052475217 25.383759522446837 25.67513802177766 25.10920140330029 80-81 24.024343348554357 25.542679413673415 25.417328379086925 25.015648858685307 82-83 23.926065878060484 25.568250705214666 25.504835601765958 25.00084781495889 84-85 23.856255156356525 25.578760302340285 25.450167121636802 25.114817419666384 86-87 23.769909138641545 25.724923724043098 25.389795839323824 25.115371297991533 88-89 23.665466145597716 25.513149791757268 25.464627921162542 25.356756141482478 90-91 23.595062892994566 25.53093805879528 25.49959116233504 25.374407885875115 92-93 23.69413007468686 25.404538047030794 25.565144929076457 25.336186949205892 94-95 23.5358831413192 25.349649077619112 25.579833204547803 25.534634576513888 96-97 23.431967887195963 25.25972756855936 25.650950654781678 25.657353889462996 98-99 23.313436184659782 25.288610025828994 25.544775568864296 25.853178220646928 100-101 23.25452131637778 25.30413720892198 25.57784905645003 25.86349241825021 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 43.0 1 39.0 2 56.0 3 82.0 4 84.0 5 90.5 6 137.0 7 299.5 8 459.0 9 477.5 10 412.0 11 350.5 12 347.0 13 382.0 14 423.5 15 485.5 16 565.0 17 621.5 18 696.0 19 795.5 20 899.0 21 1023.0 22 1212.0 23 1470.5 24 1796.5 25 2245.0 26 2885.0 27 3797.0 28 5214.0 29 7414.5 30 10714.5 31 15768.0 32 22791.0 33 28716.5 34 33890.0 35 41036.5 36 50259.5 37 59850.5 38 69230.0 39 78229.5 40 86740.0 41 95836.5 42 104874.5 43 113790.5 44 121863.5 45 131017.0 46 139170.0 47 145487.5 48 151847.0 49 155151.0 50 155227.0 51 155394.0 52 155475.5 53 154730.0 54 151952.0 55 144392.0 56 133919.5 57 121470.0 58 110354.5 59 97122.5 60 80567.5 61 67246.5 62 55672.0 63 42717.5 64 30502.5 65 22049.5 66 16435.5 67 12842.0 68 9968.0 69 7434.5 70 5697.5 71 4192.0 72 2902.5 73 2170.0 74 1631.0 75 1159.5 76 797.0 77 492.0 78 279.5 79 165.0 80 106.0 81 59.5 82 29.0 83 20.5 84 17.0 85 11.0 86 8.5 87 7.0 88 4.5 89 4.0 90 4.0 91 4.5 92 3.0 93 1.0 94 1.5 95 1.0 96 0.0 97 0.5 98 0.5 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.16389788277227216 2 1.1640474628712511E-4 3 0.009923504620977417 4 0.0059075408740716 5 0.024037580108291337 6 0.0018915771271657833 7 0.0 8 0.0 9 5.8202373143562554E-5 10-11 0.047405832925431705 12-13 4.3651779857671916E-4 14-15 0.0051072582433476146 16-17 0.0 18-19 0.0015132617017326266 20-21 1.7460711943068766E-4 22-23 0.0 24-25 4.947201717202817E-4 26-27 0.0027646127243192214 28-29 0.005136359429919395 30-31 0.01591834905476436 32-33 0.011349462762994698 34-35 0.010229067079981119 36-37 0.003754053067759785 38-39 0.0 40-41 0.003390288235612519 42-43 0.009574290382116041 44-45 0.006678722318223803 46-47 0.003521243575185535 48-49 0.008395692325958898 50-51 0.0025172526384590805 52-53 0.0020661842465964707 54-55 0.004452481545482536 56-57 0.008788558344677946 58-59 0.01613660795405272 60-61 0.007930073340810398 62-63 0.021927744081837192 64-65 0.042225821715654636 66-67 0.06114159298731246 68-69 0.05153820141862465 70-71 0.06923172285426765 72-73 0.03458676024056205 74-75 0.028591915806775104 76-77 0.22581065720373683 78-79 0.08587760157332655 80-81 0.06779121411896448 82-83 0.02865011817991867 84-85 0.05271679947478178 86-87 0.06905711573483697 88-89 0.2908954609715257 90-91 0.2941984456474228 92-93 0.052760451254639455 94-95 0.009923504620977417 96-97 0.015205369983755719 98-99 9.166873770111102E-4 100-101 2.3280949257425021E-4 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 3436286.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 57.2506091002321 #Duplication Level Percentage of deduplicated Percentage of total 1 76.96461091476901 44.06270854032897 2 12.51018303564178 14.32431197491765 3 4.197617974408526 7.209485574149116 4 1.9320960971698005 4.424547136126091 5 1.0884153939349839 3.1156222128423443 6 0.7274528808765003 2.498827231313893 7 0.47245378525930576 1.8933786884463857 8 0.3445021784912806 1.5778367643986153 9 0.2533516763500513 1.3054084008844773 >10 1.421197839167696 14.370306143815615 >50 0.06816243181311765 2.592825037948174 >100 0.018119309623637864 1.6493083475471841 >500 0.0012753350700358906 0.511504842157247 >1k 5.61147424210533E-4 0.4639291051242684 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 8.730355971534383E-5 2 0.0 0.0 0.0 2.9101186571781277E-5 8.730355971534383E-5 3 0.0 0.0 0.0 2.9101186571781277E-5 8.730355971534383E-5 4 0.0 0.0 0.0 5.8202373143562554E-5 8.730355971534383E-5 5 0.0 2.9101186571781277E-5 0.0 5.8202373143562554E-5 8.730355971534383E-5 6 0.0 2.9101186571781277E-5 0.0 5.8202373143562554E-5 1.1640474628712511E-4 7 0.0 2.9101186571781277E-5 0.0 5.8202373143562554E-5 1.1640474628712511E-4 8 0.0 2.9101186571781277E-5 0.0 5.8202373143562554E-5 1.1640474628712511E-4 9 0.0 2.9101186571781277E-5 0.0 8.730355971534383E-5 1.1640474628712511E-4 10-11 0.0 2.9101186571781277E-5 0.0 1.1640474628712511E-4 1.1640474628712511E-4 12-13 0.0 2.9101186571781277E-5 0.0 1.1640474628712511E-4 1.8915771271657832E-4 14-15 0.0 7.275296642945319E-5 0.0 1.1640474628712511E-4 2.3280949257425021E-4 16-17 0.0 8.730355971534383E-5 0.0 1.1640474628712511E-4 3.346636455754847E-4 18-19 0.0 8.730355971534383E-5 0.0 1.1640474628712511E-4 3.492142388613753E-4 20-21 0.0 8.730355971534383E-5 0.0 1.1640474628712511E-4 4.074166120049379E-4 22-23 0.0 8.730355971534383E-5 0.0 1.8915771271657832E-4 4.8016957843439106E-4 24-25 0.0 1.0185415300123448E-4 0.0 3.7831542543315664E-4 5.23821358292063E-4 26-27 0.0 1.1640474628712511E-4 0.0 6.256755112932974E-4 5.23821358292063E-4 28-29 0.0 1.3095533957301574E-4 0.0 0.0026773091646038775 5.23821358292063E-4 30-31 0.0 1.455059328589064E-4 0.0 0.011902385307858542 5.23821358292063E-4 32-33 0.0 1.455059328589064E-4 0.0 0.034324849561416015 5.529225448638443E-4 34-35 1.4550593285890638E-5 1.455059328589064E-4 0.0 0.06467738715578389 5.529225448638443E-4 36-37 2.9101186571781277E-5 2.0370830600246895E-4 0.0 0.11259249084622176 5.529225448638443E-4 38-39 2.9101186571781277E-5 2.9101186571781274E-4 0.0 0.19427952155321182 5.820237314356256E-4 40-41 2.9101186571781277E-5 3.346636455754847E-4 0.0 0.28712685731047993 5.820237314356256E-4 42-43 2.9101186571781277E-5 3.7831542543315664E-4 0.0 0.38576532919553264 5.820237314356256E-4 44-45 2.9101186571781277E-5 3.7831542543315664E-4 0.0 0.5033195723522431 5.820237314356256E-4 46-47 2.9101186571781277E-5 3.7831542543315664E-4 0.0 0.64156475916149 5.820237314356256E-4 48-49 2.9101186571781277E-5 3.7831542543315664E-4 0.0 0.786736028374821 6.111249180074069E-4 50-51 2.9101186571781277E-5 3.9286601871904727E-4 0.0 0.9415252397501255 6.984284777227506E-4 52-53 2.9101186571781277E-5 4.074166120049379E-4 0.0 1.0987589507974598 7.420802575804226E-4 54-55 2.9101186571781277E-5 4.074166120049379E-4 0.0 1.279710128900796 7.857320374380945E-4 56-57 2.9101186571781277E-5 4.074166120049379E-4 0.0 1.4866777677993042 8.148332240098758E-4 58-59 2.9101186571781277E-5 4.074166120049379E-4 0.0 1.7081232470172738 8.148332240098758E-4 60-61 2.9101186571781277E-5 4.074166120049379E-4 0.0 1.9436828017225576 8.439344105816571E-4 62-63 2.9101186571781277E-5 4.074166120049379E-4 0.0 2.190402661478119 8.730355971534383E-4 64-65 2.9101186571781277E-5 4.074166120049379E-4 0.0 2.4495341773065453 8.730355971534383E-4 66-67 2.9101186571781277E-5 4.3651779857671916E-4 0.0 2.7516772468880646 8.730355971534383E-4 68-69 2.9101186571781277E-5 4.3651779857671916E-4 0.0 3.082630491175647 8.730355971534383E-4 70-71 2.9101186571781277E-5 4.3651779857671916E-4 0.0 3.4294293315515647 8.875861904393289E-4 72-73 4.3651779857671915E-5 4.3651779857671916E-4 0.0 3.791258934791807 9.894403434405634E-4 74-75 5.8202373143562554E-5 4.3651779857671916E-4 0.0 4.1792505047600805 0.0010185415300123448 76-77 5.8202373143562554E-5 4.947201717202817E-4 0.0 4.603327546077364 0.001047642716584126 78-79 5.8202373143562554E-5 4.947201717202817E-4 0.0 5.078244360335548 0.0010912944964417979 80-81 5.8202373143562554E-5 4.947201717202817E-4 0.0 5.572309755357965 0.0011058450897276887 82-83 5.8202373143562554E-5 4.947201717202817E-4 0.0 6.083384793931588 0.0011640474628712512 84-85 5.8202373143562554E-5 4.947201717202817E-4 0.0 6.621451183050538 0.0011931486494430323 86-87 5.8202373143562554E-5 5.23821358292063E-4 0.0 7.1912087643461575 0.0012368004293007043 88-89 5.8202373143562554E-5 5.23821358292063E-4 0.0 7.799816429715105 0.0012804522091583762 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 2455 0.0 48.796726 1 GTATCAA 4690 0.0 44.90271 1 TCAACGC 5870 0.0 35.008747 4 CAACGCA 6080 0.0 33.750484 5 TATCAAC 6115 0.0 33.606106 2 ATCAACG 6295 0.0 32.64517 3 AACGCAG 6470 0.0 31.784393 6 ACGCAGA 7860 0.0 25.861368 7 CGCAGAG 8225 0.0 24.309526 8 GTACATG 9985 0.0 24.138014 1 TACATGG 10495 0.0 22.565495 2 ACATGGG 10925 0.0 21.199476 3 GCAGAGT 9625 0.0 19.934755 9 CATGGGG 9380 0.0 19.12563 4 AGAGTAC 8140 0.0 18.407942 10-11 TAAGGTG 1680 0.0 17.812756 5 GAGTACA 7955 0.0 17.150759 1 GTATACG 170 0.0017789784 16.778145 1 ATGGGGG 5215 0.0 16.486336 5 CAGAGTA 8900 0.0 16.275717 10-11 >>END_MODULE