##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921711_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2909394 Sequences flagged as poor quality 0 Sequence length 101 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.283116690279833 31.0 31.0 34.0 26.0 34.0 2 30.33277273549062 31.0 31.0 34.0 26.0 34.0 3 30.389709334658694 33.0 31.0 34.0 26.0 34.0 4 33.8515168450887 37.0 35.0 37.0 30.0 37.0 5 33.84912975004417 37.0 35.0 37.0 30.0 37.0 6 33.88844687244148 37.0 35.0 37.0 30.0 37.0 7 33.80119261949395 37.0 35.0 37.0 29.0 37.0 8 33.77411790909035 37.0 35.0 37.0 29.0 37.0 9 35.32083829141051 39.0 35.0 39.0 29.0 39.0 10-11 35.21431988929653 39.0 35.0 39.0 29.0 39.0 12-13 35.09536573595739 39.0 35.0 39.0 28.0 39.0 14-15 36.20804624605674 40.0 36.0 41.0 27.0 41.0 16-17 36.1500027153421 40.0 36.0 41.0 27.0 41.0 18-19 36.118764938677955 40.0 36.0 41.0 27.0 41.0 20-21 36.042775058998544 40.0 36.0 41.0 27.0 41.0 22-23 35.94568078438328 40.0 36.0 41.0 27.0 41.0 24-25 35.831040931547946 40.0 36.0 41.0 27.0 41.0 26-27 35.675994210478194 40.0 36.0 41.0 26.5 41.0 28-29 35.537994166482775 40.0 36.0 41.0 25.5 41.0 30-31 35.38276493317852 39.5 35.5 41.0 25.0 41.0 32-33 35.197708698100016 39.0 35.0 41.0 24.5 41.0 34-35 35.02801030042683 39.0 35.0 41.0 24.0 41.0 36-37 34.99105861908012 39.0 35.0 41.0 24.0 41.0 38-39 35.16774816336323 39.5 35.0 41.0 24.0 41.0 40-41 35.22442732060353 40.0 35.0 41.0 24.0 41.0 42-43 35.06096475760931 40.0 35.0 41.0 23.0 41.0 44-45 34.93832667558949 40.0 35.0 41.0 23.0 41.0 46-47 34.77635016089261 39.5 35.0 41.0 21.5 41.0 48-49 34.60791027272346 39.0 35.0 41.0 20.0 41.0 50-51 32.91942480117853 37.0 32.5 39.5 16.5 40.0 52-53 33.03410469671691 37.5 32.5 39.5 14.5 40.0 54-55 33.94297369142852 38.5 34.0 40.5 17.0 41.0 56-57 33.96841679057563 38.5 34.0 41.0 16.0 41.0 58-59 33.77993338131583 38.0 34.0 41.0 13.5 41.0 60-61 33.525385527020404 38.0 34.0 40.0 12.5 41.0 62-63 33.23228084611435 37.0 33.0 40.0 8.5 41.0 64-65 32.94843341946811 37.0 33.0 40.0 7.5 41.0 66-67 32.61198414515188 36.0 33.0 39.5 4.5 41.0 68-69 32.25244810431313 36.0 32.5 39.0 2.0 41.0 70-71 31.848225781726367 35.0 32.0 39.0 2.0 40.5 72-73 31.496137339940894 35.0 32.0 37.5 2.0 40.0 74-75 31.097415991096426 35.0 32.0 37.0 2.0 39.0 76-77 30.725928492325206 35.0 31.0 36.5 2.0 39.0 78-79 30.381511579387322 35.0 31.0 36.0 2.0 38.5 80-81 30.070534448067193 35.0 31.0 36.0 2.0 37.0 82-83 29.756116565855294 35.0 31.0 35.0 2.0 37.0 84-85 29.49138119484676 35.0 31.0 35.0 2.0 36.5 86-87 29.25626281624283 35.0 30.0 35.0 2.0 36.0 88-89 29.030219007807126 34.5 30.0 35.0 2.0 36.0 90-91 28.805370121750443 34.0 30.0 35.0 2.0 35.5 92-93 28.6079635484228 34.0 30.0 35.0 2.0 35.0 94-95 28.37117128171709 34.0 29.5 35.0 2.0 35.0 96-97 28.13022333860591 34.0 29.0 35.0 2.0 35.0 98-99 27.856778765612358 34.0 29.0 35.0 2.0 35.0 100-101 26.782887948486866 33.0 26.5 34.5 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 105717.0 3 18031.0 4 12473.0 5 9469.0 6 8546.0 7 8646.0 8 9251.0 9 9714.0 10 10625.0 11 11388.0 12 11358.0 13 11464.0 14 12102.0 15 13285.0 16 13303.0 17 13840.0 18 13446.0 19 12268.0 20 12432.0 21 13038.0 22 14299.0 23 16405.0 24 19358.0 25 22476.0 26 26794.0 27 31663.0 28 37237.0 29 44340.0 30 52878.0 31 64319.0 32 79869.0 33 103141.0 34 146152.0 35 208106.0 36 340577.0 37 610126.0 38 646805.0 39 114439.0 40 14.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.09546572209708 18.190449988823357 12.851866499303611 24.86221778977595 2 16.04430598537374 19.874678259804757 39.07290668081068 25.00810907401082 3 18.87318963581012 24.46187379121312 29.40010463111341 27.26483194186335 4 13.29249895265592 15.740463665587335 36.8992561621323 34.06778121962444 5 14.186030754393741 37.56388248683485 34.159430463489606 14.0906562952818 6 33.179964284548 35.227604366291345 17.49472775991241 14.097703589248239 7 28.82248014022587 31.993581345751714 21.338106531372585 17.84583198264983 8 27.04762350026006 34.21883921907814 20.27593736646681 18.45759991419499 9 27.53128312725403 15.264832416483229 19.337138685208075 37.86674577105467 10-11 25.75309700411238 25.168656396774036 27.894057829077205 21.18418877003638 12-13 26.30195105508035 22.652766583143087 27.722144096134453 23.323138265642108 14-15 23.586127953120737 24.117257293679987 25.000885416147305 27.295729337051966 16-17 23.70936757863903 27.08012126014978 25.803709487910513 23.406801673300677 18-19 23.71832485821231 26.653972031928742 26.99333780893973 22.634365300919217 20-21 24.232601927972862 25.837951063434435 26.96076552359189 22.968681485000808 22-23 24.200928706876248 25.485559656780747 26.61520555504935 23.69830608129366 24-25 23.947935152917665 25.755605766240436 26.535928633207504 23.760530447634387 26-27 23.613643430786986 26.018256079128584 26.587944208311065 23.780156281773365 28-29 23.740123693493278 26.28578686720438 26.352148840573307 23.621940598729033 30-31 24.2033065720655 25.925635644564988 26.213495447834433 23.65756233553508 32-33 23.933621023916313 26.00871596593362 26.07648504164799 23.981177968502074 34-35 24.26412886668988 26.128533956818263 26.19652424568762 23.41081293080424 36-37 24.250792696025776 25.92793984962406 26.30245327604726 23.5188141783029 38-39 24.087321528865765 26.09287682853641 26.13372866406764 23.686072978530188 40-41 24.236063885604946 25.808542198248997 26.255067056924787 23.700326859221274 42-43 23.998050976371964 25.848383323136957 26.074236511847086 24.079329188643992 44-45 23.801353145582215 25.901547492592965 26.318945019614638 23.978154342210185 46-47 24.03165568663632 25.83342072242452 26.0151555930482 24.119767997890953 48-49 23.845605300259464 26.00081178433952 26.057364600864375 24.096218314536642 50-51 23.88554488643134 25.942226933442985 26.278211361618563 23.894016818507108 52-53 24.161299310592803 25.748792237254992 26.22872875544729 23.86117969670492 54-55 23.47069716599274 25.6574449817418 26.662274458806174 24.209583393459283 56-57 23.680802715025006 25.77019616703162 26.321074300183295 24.227926817760075 58-59 23.903911516592704 25.676862107019403 26.369172024892844 24.050054351495046 60-61 23.87910149350948 25.79280313709497 26.498284390424274 23.829810978971274 62-63 23.8969089065591 25.683331680194847 26.566400373609294 23.85335903963675 64-65 23.60890766104931 25.506403192874476 26.489272505885385 24.395416640190824 66-67 23.69689195767595 25.696241395942238 26.280059421874817 24.326807224506993 68-69 23.714893145884414 25.65032558250056 26.422280770116213 24.212500501498816 70-71 23.704959947658626 25.43012469815471 26.329638732615646 24.53527662157102 72-73 23.651944430047063 25.74546917260322 26.143634749077165 24.458951648272553 74-75 23.614702055107653 25.85477955578652 26.26862849730681 24.26188989179901 76-77 23.68428529046684 25.397327737120328 26.34933365612114 24.569053316291697 78-79 23.615139463363207 25.440547031579413 26.411260810249022 24.53305269480836 80-81 23.89714246937782 25.690063685732774 26.06161689803273 24.35117694685668 82-83 23.874698084689225 25.64432137429507 26.278326304143253 24.202654236872455 84-85 23.817208819475205 25.621430357572173 26.224674525764115 24.33668629718851 86-87 23.66448123840093 25.850558322891942 26.133052859895457 24.35190757881167 88-89 23.65235807410485 25.517931642427456 26.249396732486126 24.580313550981572 90-91 23.781917798969562 25.373202200189855 26.37239279517575 24.472487205664837 92-93 24.030770084031936 25.151017892720155 26.41565656504763 24.402555458200283 94-95 23.87244575430667 25.124665620537662 26.40923395452267 24.593654670633 96-97 23.800764704787984 24.942636805190457 26.50083133567012 24.75576715435144 98-99 23.57958509157316 24.943269528562634 26.43777768820788 25.039367691656324 100-101 23.874882538730997 24.95081484314237 26.485257372605663 24.68904524552097 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 68.0 1 63.5 2 100.0 3 150.5 4 125.0 5 137.5 6 222.0 7 425.5 8 694.0 9 754.0 10 630.0 11 542.5 12 585.0 13 689.5 14 818.5 15 955.0 16 1026.5 17 1039.0 18 1179.5 19 1328.0 20 1419.0 21 1548.5 22 1670.5 23 1907.5 24 2182.0 25 2522.5 26 3238.0 27 4285.5 28 5694.0 29 7820.0 30 11272.5 31 16557.5 32 23995.5 33 30528.5 34 36107.0 35 43412.0 36 52974.5 37 62246.0 38 69672.5 39 77473.5 40 83362.5 41 88045.0 42 93310.0 43 99085.0 44 104554.5 45 110825.0 46 115836.0 47 119271.0 48 123039.0 49 124926.0 50 125453.0 51 124576.5 52 123347.0 53 122917.0 54 121411.0 55 115941.5 56 107341.0 57 96779.0 58 86844.0 59 75136.5 60 61010.5 61 50088.5 62 41911.0 63 32784.0 64 23533.0 65 17119.5 66 12934.5 67 9995.0 68 7522.5 69 5769.0 70 4486.0 71 3215.0 72 2252.0 73 1685.5 74 1352.0 75 1015.0 76 718.5 77 486.5 78 306.5 79 215.5 80 166.5 81 140.0 82 115.5 83 84.5 84 72.5 85 57.5 86 46.0 87 40.5 88 38.0 89 38.5 90 36.5 91 28.5 92 23.0 93 19.0 94 16.5 95 12.0 96 8.0 97 7.5 98 5.5 99 5.5 100 4.5 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.05306947082450847 2 0.07413915062724402 3 0.07001458035590917 4 0.07011769461269253 5 0.06554629589529641 6 0.009933340070131443 7 0.012820539260065841 8 0.01625768115284489 9 0.005430684190590893 10-11 0.012820539260065841 12-13 0.021808665309683048 14-15 0.039767731699453565 16-17 0.02651754970279034 18-19 0.010002082907987023 20-21 0.020193208620076897 22-23 0.036055618455252195 24-25 0.03376991909655413 26-27 0.020949379836488286 28-29 0.011978439496334975 30-31 0.011651911016520966 32-33 0.008592854731947616 34-35 0.005327569933807522 36-37 6.530569596280187E-4 38-39 0.0034371418927790463 40-41 0.0012889282097921424 42-43 0.22004582397571454 44-45 0.19136287488047338 46-47 0.1963811020439308 48-49 0.2032553858294889 50-51 0.19550463086127215 52-53 0.20227580039004683 54-55 0.19821997295656757 56-57 0.20100405788971862 58-59 0.2086345128916881 60-61 0.21305124022390917 62-63 0.20024788667330723 64-65 0.19947452974743196 66-67 0.19761847312533123 68-69 0.1924283888672349 70-71 0.18496979095990437 72-73 0.1960030164357251 74-75 0.19514373096253035 76-77 0.1899192752855062 78-79 0.20674408485065965 80-81 0.2169008391438217 82-83 0.21523382532582389 84-85 0.20939068410809947 86-87 0.22970419269442363 88-89 0.22179876634103182 90-91 0.22838089306570372 92-93 0.223740751510452 94-95 0.22784813607232296 96-97 0.2349630197903756 98-99 0.22798562174803413 100-101 0.23515206259447843 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 2909394.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 56.62506685581072 #Duplication Level Percentage of deduplicated Percentage of total 1 77.75901662912094 44.03109515266071 2 11.889864846104603 13.465287836344537 3 4.115284155081808 6.9908472123649785 4 1.875615264355957 4.248273589597407 5 1.0768283191846897 3.048773778303167 6 0.6856115194605877 2.3293678875941852 7 0.46301589903417034 1.8352814366679244 8 0.3408532039549433 1.5440668369572763 9 0.25605315147936053 1.3049124139043837 >10 1.4295061411031056 14.500896801407567 >50 0.07867333712454676 2.9978010947657454 >100 0.02760458137623033 2.586963787122032 >500 0.0012803530884560827 0.5164077071873087 >1k 7.92599530754454E-4 0.6000244651228483 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 3.437141892779046E-5 5 0.0 0.0 0.0 0.0 3.437141892779046E-5 6 0.0 0.0 0.0 0.0 6.874283785558092E-5 7 0.0 0.0 0.0 0.0 6.874283785558092E-5 8 0.0 0.0 0.0 0.0 6.874283785558092E-5 9 0.0 0.0 0.0 0.0 1.0311425678337138E-4 10-11 0.0 0.0 0.0 0.0 1.0311425678337138E-4 12-13 1.718570946389523E-5 0.0 0.0 0.0 2.5778564195842843E-4 14-15 3.437141892779046E-5 0.0 0.0 0.0 3.952713176695903E-4 16-17 3.437141892779046E-5 0.0 0.0 5.155712839168569E-5 5.155712839168569E-4 18-19 3.437141892779046E-5 0.0 0.0 6.874283785558092E-5 5.843141217724378E-4 20-21 3.437141892779046E-5 0.0 0.0 1.0311425678337138E-4 6.186855407002283E-4 22-23 3.437141892779046E-5 0.0 0.0 2.0622851356674277E-4 6.874283785558092E-4 24-25 3.437141892779046E-5 0.0 0.0 5.155712839168569E-4 7.561712164113901E-4 26-27 3.437141892779046E-5 0.0 0.0 8.936568921225519E-4 8.936568921225519E-4 28-29 3.437141892779046E-5 0.0 0.0 0.0032309133792123032 9.623997299781329E-4 30-31 3.437141892779046E-5 0.0 0.0 0.015587438483752974 9.967711489059232E-4 32-33 3.437141892779046E-5 0.0 0.0 0.04392667338971621 0.0010311425678337137 34-35 3.437141892779046E-5 0.0 0.0 0.08063534880459641 0.0010655139867615042 36-37 3.437141892779046E-5 0.0 0.0 0.14047598915787962 0.0010998854056892948 38-39 3.437141892779046E-5 0.0 0.0 0.24345276026553986 0.0011342568246170853 40-41 3.437141892779046E-5 0.0 0.0 0.35615664292976473 0.0011686282435448756 42-43 3.437141892779046E-5 0.0 0.0 0.4749442667442086 0.001202999662472666 44-45 3.437141892779046E-5 0.0 0.0 0.6209712400589263 0.0013232996287199329 46-47 3.437141892779046E-5 0.0 0.0 0.789339635676708 0.001409228176039409 48-49 3.437141892779046E-5 0.0 0.0 0.9612482874440519 0.0014607853044310945 50-51 3.437141892779046E-5 0.0 0.0 1.1436230362749082 0.0015295281422866755 52-53 3.437141892779046E-5 0.0 0.0 1.3299676839919239 0.0017013852369256277 54-55 3.437141892779046E-5 0.0 0.0 1.5417128102965774 0.0018044994937089992 56-57 3.437141892779046E-5 0.0 0.0 1.7847359278255195 0.0018388709126367898 58-59 3.437141892779046E-5 0.0 0.0 2.043054326777329 0.0018560566221006848 60-61 3.437141892779046E-5 0.0 0.0 2.317578849753591 0.0019076137504923706 62-63 3.437141892779046E-5 0.0 0.0 2.605869126010434 0.0019247994599562658 64-65 3.437141892779046E-5 0.0 0.0 2.9071002414935894 0.0019591708788840563 66-67 3.437141892779046E-5 3.437141892779046E-5 0.0 3.2519143161771833 0.0019763565883479514 68-69 3.437141892779046E-5 3.437141892779046E-5 0.0 3.627972010666139 0.001993542297811847 70-71 3.437141892779046E-5 3.437141892779046E-5 0.0 4.016558087354274 0.002096656554595218 72-73 3.437141892779046E-5 3.437141892779046E-5 0.0 4.428207386142956 0.0021310279735230085 74-75 3.437141892779046E-5 3.437141892779046E-5 0.0 4.852419438549746 0.0021825851019146945 76-77 3.437141892779046E-5 3.437141892779046E-5 0.0 5.317670965156317 0.00223414223030638 78-79 3.437141892779046E-5 3.437141892779046E-5 0.0 5.838363590493415 0.00223414223030638 80-81 3.437141892779046E-5 3.437141892779046E-5 0.0 6.380624281207702 0.0022513279397702755 82-83 3.437141892779046E-5 3.437141892779046E-5 0.0 6.943181294798848 0.002302885068161961 84-85 3.437141892779046E-5 3.437141892779046E-5 0.0 7.526550202550771 0.002320070777625856 86-87 3.437141892779046E-5 3.437141892779046E-5 0.0 8.148071385312543 0.0023888136154814367 88-89 3.437141892779046E-5 3.437141892779046E-5 0.0 8.810528928017312 0.0024403707438731227 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 2395 0.0 54.101196 1 GTATCAA 4760 0.0 46.96385 1 TCAACGC 5975 0.0 36.54638 4 CAACGCA 6130 0.0 35.61922 5 ATCAACG 6265 0.0 35.08079 3 TATCAAC 6420 0.0 34.528988 2 AACGCAG 6530 0.0 33.563667 6 GTACATG 10155 0.0 30.800318 1 TACATGG 10665 0.0 28.707863 2 ACGCAGA 7680 0.0 27.800919 7 ACATGGG 10985 0.0 26.964602 3 CGCAGAG 7790 0.0 26.49565 8 CATGGGG 8980 0.0 24.951122 4 ATGGGGG 5860 0.0 21.870224 5 GCAGAGT 9190 0.0 21.633224 9 GAGTACA 7295 0.0 20.494389 1 GTATAGG 845 0.0 20.220667 1 AGAGTAC 7835 0.0 18.894789 10-11 TAAGGTG 1445 0.0 18.723803 5 TAAGGTA 795 0.0 18.510536 4 >>END_MODULE