##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921711_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2909394 Sequences flagged as poor quality 0 Sequence length 101 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.189719921055726 33.0 31.0 34.0 28.0 34.0 2 31.327862778296787 33.0 31.0 34.0 28.0 34.0 3 31.396301085380667 34.0 31.0 34.0 28.0 34.0 4 34.881765412316106 37.0 35.0 37.0 32.0 37.0 5 34.60856487639694 37.0 35.0 37.0 32.0 37.0 6 34.57821560091208 37.0 35.0 37.0 32.0 37.0 7 34.4605639524932 37.0 35.0 37.0 31.0 37.0 8 34.39682696809026 37.0 35.0 37.0 31.0 37.0 9 35.961699584174575 39.0 37.0 39.0 31.0 39.0 10-11 35.84333438509876 39.0 37.0 39.0 30.0 39.0 12-13 35.75880458267254 39.0 37.0 39.0 30.0 39.0 14-15 36.96063028933173 40.0 37.0 41.0 31.0 41.0 16-17 36.91996855702597 40.0 37.0 41.0 31.0 41.0 18-19 36.881929707698575 40.0 37.0 41.0 30.0 41.0 20-21 36.82531087229849 40.0 37.0 41.0 30.0 41.0 22-23 36.73399615177594 40.0 37.0 41.0 30.0 41.0 24-25 36.64087315090359 40.0 37.0 41.0 30.0 41.0 26-27 36.50766087370772 40.0 37.0 41.0 30.0 41.0 28-29 36.380175562333605 40.0 37.0 41.0 29.0 41.0 30-31 36.21215174019057 40.0 36.0 41.0 28.5 41.0 32-33 36.152134602601095 40.0 36.0 41.0 28.5 41.0 34-35 36.277962180440326 40.0 37.0 41.0 29.0 41.0 36-37 36.26404948934383 40.0 36.5 41.0 29.0 41.0 38-39 36.15898912282077 40.0 36.0 41.0 28.5 41.0 40-41 36.07130780499307 40.0 36.0 41.0 28.0 41.0 42-43 35.94172549335016 40.0 36.0 41.0 27.5 41.0 44-45 35.804473027716426 40.0 35.5 41.0 27.0 41.0 46-47 35.64031581834567 40.0 35.0 41.0 26.5 41.0 48-49 35.48751561321705 40.0 35.0 41.0 26.0 41.0 50-51 35.32814032750463 39.0 35.0 41.0 26.0 41.0 52-53 35.15746560967679 39.0 35.0 41.0 25.5 41.0 54-55 34.93886940029436 39.0 35.0 41.0 24.0 41.0 56-57 34.71297338896004 39.0 35.0 41.0 24.0 41.0 58-59 34.47503260129085 38.0 34.0 40.0 23.5 41.0 60-61 34.19188325816304 38.0 34.0 40.0 23.0 41.0 62-63 33.88236313129126 37.0 34.0 40.0 22.0 41.0 64-65 33.548883031999104 37.0 34.0 40.0 22.0 41.0 66-67 33.205026029475555 36.0 33.5 39.0 21.0 41.0 68-69 32.84187995850682 36.0 33.0 39.0 20.0 41.0 70-71 32.44769409024697 35.0 33.0 38.5 18.5 40.0 72-73 32.08638878061892 35.0 33.0 37.5 18.0 39.5 74-75 31.682165426889583 35.0 32.0 37.0 14.0 39.0 76-77 28.989720539741263 33.0 28.0 34.5 7.5 36.5 78-79 30.554775839917177 34.5 31.0 36.0 8.0 37.0 80-81 30.741096771355135 35.0 32.0 35.5 7.0 37.0 82-83 30.55859055184688 35.0 32.0 35.0 6.0 37.0 84-85 30.360422307875798 35.0 32.0 35.0 2.0 36.0 86-87 30.14803168632368 35.0 31.0 35.0 2.0 36.0 88-89 29.880977103822996 34.5 31.0 35.0 2.0 36.0 90-91 29.679131977312114 34.0 31.0 35.0 2.0 35.0 92-93 29.510780595546702 34.0 31.0 35.0 2.0 35.0 94-95 29.395991055181938 34.0 31.0 35.0 2.0 35.0 96-97 29.185185815327866 34.0 31.0 35.0 2.0 35.0 98-99 28.979029309883778 34.0 31.0 35.0 2.0 35.0 100-101 27.843957195209725 33.0 28.0 34.5 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 64848.0 3 21384.0 4 11663.0 5 8083.0 6 6826.0 7 6959.0 8 7141.0 9 7680.0 10 8470.0 11 9183.0 12 9902.0 13 10459.0 14 11043.0 15 12161.0 16 13124.0 17 14007.0 18 12997.0 19 11588.0 20 11235.0 21 11271.0 22 11903.0 23 13232.0 24 15950.0 25 18720.0 26 22474.0 27 26942.0 28 32428.0 29 38805.0 30 47439.0 31 58278.0 32 74645.0 33 97999.0 34 143548.0 35 208785.0 36 359303.0 37 684424.0 38 699747.0 39 84746.0 40 2.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.58631679613997 19.840845263397785 13.506533564946299 26.066304375515948 2 14.990850309412151 21.38755642080053 37.41436343313439 26.207229836652935 3 17.420590342278622 25.637862260801654 29.23242028784239 27.709127109077336 4 13.003246239875265 17.049290323290293 35.65010043956921 34.29736299726524 5 13.929456596516115 37.91004002201709 34.21574758590672 13.944755795560068 6 33.0934960006297 35.96246974822064 17.177579878274503 13.766454372875156 7 28.558603117557514 32.15512651608085 21.39264100793533 17.89362935842631 8 27.05257520982033 34.62153974332799 20.007602957866826 18.318282088984855 9 27.18288660211941 15.16728747199158 19.23274030012446 38.41708562576455 10-11 25.67635924351615 25.47036089342865 27.843975635764796 21.009304227290407 12-13 26.148897714346308 22.854474646115257 27.73026203290625 23.26636560663219 14-15 23.369986939993577 24.36819490568661 24.93407695796548 27.32774119635433 16-17 23.610432275587286 27.332856945466993 25.722796568632507 23.333914210313214 18-19 23.622343329776413 26.829896628166104 26.968638887394665 22.57912115466282 20-21 24.139496123837834 25.97502118574524 26.883976014866366 23.00150667555056 22-23 24.015447890522907 25.668163198246784 26.619443774201773 23.696945137028536 24-25 23.80642054541536 25.931702263610205 26.500242835326716 23.76163435564772 26-27 23.480442459944754 26.15169736078002 26.618472219763657 23.749387959511576 28-29 23.625075470702587 26.41375767532534 26.364982075224763 23.59618477874731 30-31 24.10314252054122 26.039522748578765 26.182686486711333 23.674648244168687 32-33 23.866603186934636 26.16070799380557 26.01866922877282 23.95401959048698 34-35 24.128737566652642 26.25734244676726 26.22516768003432 23.388752306545776 36-37 24.114459797403725 26.07712517532238 26.311598714941326 23.496816312332573 38-39 24.01115146315693 26.229396912209207 26.113376187618453 23.64607543701541 40-41 24.160267914072538 25.97149958529415 26.192773428302633 23.675459072330682 42-43 23.92868240929928 25.970823559499618 26.004063760687053 24.096430270514052 44-45 23.703298856382705 26.00038154950347 26.25168861435657 24.044630979757255 46-47 23.922481390209324 25.95581359497348 26.006324226696663 24.115380788120532 48-49 23.692011753366305 26.151377528080616 26.117965408143483 24.038645310409596 50-51 23.7912990753998 26.070893405535983 26.16950780279114 23.96829971627308 52-53 24.10006004812787 25.87543261634196 26.098868709769558 23.925638625760612 54-55 23.373046590349748 25.83373091275068 26.520655339205135 24.272567157694432 56-57 23.58188689881805 25.896554509627336 26.173678701620567 24.347879889934056 58-59 23.720250853486945 25.825100405679162 26.275383308542022 24.179265432291867 60-61 23.76537374792897 26.00885816621866 26.304577234822187 23.92119085103019 62-63 23.724376354420013 25.905715607336244 26.33639689166892 24.033511146574824 64-65 23.37800817619427 25.671541046537737 26.360231882343676 24.590218894924316 66-67 23.440244957704007 25.90970090837679 26.124035460124556 24.526018673794646 68-69 23.53404717665989 25.79607561553426 26.17980337154964 24.49007383625621 70-71 23.459470187035805 25.640743424201375 26.093366735634728 24.806419653128096 72-73 23.420280327511215 25.94881859374138 25.88899228601651 24.741908792730896 74-75 23.383796649573192 26.057664224667793 25.8915198284269 24.667019297332114 76-77 23.401654895075325 25.58564721878177 26.070789384709798 24.941908501433105 78-79 23.289021779213705 25.54829872252831 26.200261301028693 24.9624181972293 80-81 23.610278465391232 25.829478513269077 25.798127467196625 24.76211555414307 82-83 23.55927538695829 25.78093453085653 25.95852767700911 24.701262405176074 84-85 23.41638892915316 25.79979892509005 25.869351517080446 24.914460628676334 86-87 23.27089192213577 25.985904120988685 25.76094719574279 24.982256761132753 88-89 23.177561491674343 25.675922799546285 25.871221463790288 25.275294244989084 90-91 23.227309988410504 25.556361435167407 26.014960174456082 25.201368401966008 92-93 23.415310600016507 25.337973534347576 26.005856419708934 25.240859445926983 94-95 23.177141922156547 25.317160590945726 26.092030496366014 25.41366699053172 96-97 23.00537558171013 25.13108083138893 26.171563129783127 25.691980457117815 98-99 22.766963402945688 25.126543566853826 26.081302383485657 26.025190646714837 100-101 22.78682520851883 25.20954997603449 26.11274633389582 25.890878481550857 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 81.0 1 68.5 2 80.5 3 115.0 4 112.0 5 127.0 6 209.0 7 395.0 8 571.5 9 607.5 10 516.0 11 423.5 12 432.5 13 479.0 14 513.5 15 541.0 16 599.0 17 678.5 18 750.5 19 848.0 20 978.5 21 1146.0 22 1326.0 23 1565.0 24 1915.0 25 2352.0 26 3073.0 27 4158.5 28 5628.5 29 8128.0 30 11932.0 31 17134.5 32 24738.5 33 31363.0 34 36901.0 35 44032.5 36 53306.0 37 62516.5 38 69414.0 39 77213.0 40 83736.5 41 87935.0 42 92615.5 43 98460.0 44 104309.5 45 110798.5 46 116028.0 47 119644.0 48 123205.5 49 125306.5 50 126084.0 51 125523.5 52 124859.0 53 124871.5 54 123416.5 55 117266.5 56 108209.5 57 97680.5 58 87016.5 59 74579.5 60 60624.0 61 50214.0 62 41807.5 63 31820.0 64 22379.0 65 16238.5 66 12226.0 67 9404.5 68 7182.0 69 5427.5 70 4011.0 71 2846.5 72 1991.5 73 1497.5 74 1130.5 75 789.5 76 536.5 77 322.0 78 177.0 79 102.0 80 61.5 81 43.5 82 30.0 83 18.5 84 10.0 85 5.0 86 5.0 87 4.0 88 1.5 89 2.5 90 3.5 91 2.0 92 1.0 93 1.0 94 0.5 95 0.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.15632121328359103 2 2.0622851356674277E-4 3 0.01038016851619272 4 0.006255598244857864 5 0.025606707101203892 6 0.002096656554595218 7 3.437141892779046E-5 8 0.0 9 3.437141892779046E-5 10-11 0.04677950116072282 12-13 2.5778564195842843E-4 14-15 0.004485470170076655 16-17 0.0 18-19 0.0014607853044310945 20-21 2.921570608862189E-4 22-23 0.0 24-25 5.155712839168569E-4 26-27 0.0023544421965536466 28-29 0.005241641386488045 30-31 0.016738881017833954 32-33 0.011308196827243062 34-35 0.00969274013763691 36-37 0.003798041791520846 38-39 0.0 40-41 0.003540256149562418 42-43 0.009142797434792262 44-45 0.007011769461269254 46-47 0.0036261846968818935 48-49 0.009280283110503424 50-51 0.002835642061542713 52-53 0.002096656554595218 54-55 0.004193313109190436 56-57 0.007871054934464015 58-59 0.015295281422866755 60-61 0.007355483650547159 62-63 0.021671179633971884 64-65 0.0410738456187096 66-67 0.061524839880744926 68-69 0.050629100080635356 70-71 0.06906936633539493 72-73 0.0334949477451318 74-75 0.026792521054212665 76-77 0.22102540941515655 78-79 0.08256014826455269 80-81 0.06857098076094197 82-83 0.026792521054212665 84-85 0.052330485317560974 86-87 0.06697270978079971 88-89 0.2905244184871489 90-91 0.2918820895347966 92-93 0.05066347149956314 94-95 0.008953754630689415 96-97 0.013971981794146823 98-99 7.046140880197045E-4 100-101 1.5467138517505708E-4 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 2909394.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 55.92771750675222 #Duplication Level Percentage of deduplicated Percentage of total 1 77.1353206278088 43.14002421864847 2 12.255798572544816 13.708776807698872 3 4.174038082454853 7.003332682138824 4 1.920800206443626 4.297038853315619 5 1.1179240489560627 3.126147020200966 6 0.7043633397116866 2.3636060331304654 7 0.4670056228864523 1.8282990985600853 8 0.3664536159716784 1.6395931450713515 9 0.2825538578671392 1.4222333108912744 >10 1.4637966391631623 14.722032031098678 >50 0.08324209140422291 3.1502945066577652 >100 0.02667289803422272 2.519157245300448 >500 0.0012920706612780364 0.5248326714087741 >1k 7.383260920537197E-4 0.5546323758785143 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.3748567571116184E-4 2 0.0 0.0 0.0 0.0 1.3748567571116184E-4 3 0.0 0.0 0.0 0.0 1.3748567571116184E-4 4 0.0 0.0 0.0 0.0 1.3748567571116184E-4 5 0.0 0.0 0.0 0.0 1.3748567571116184E-4 6 0.0 0.0 0.0 0.0 1.3748567571116184E-4 7 0.0 0.0 0.0 0.0 1.3748567571116184E-4 8 0.0 0.0 0.0 0.0 1.3748567571116184E-4 9 0.0 0.0 0.0 0.0 1.3748567571116184E-4 10-11 0.0 0.0 0.0 0.0 1.3748567571116184E-4 12-13 0.0 0.0 0.0 0.0 3.0934277035011415E-4 14-15 0.0 0.0 0.0 0.0 4.46828446061276E-4 16-17 0.0 0.0 0.0 5.155712839168569E-5 5.155712839168569E-4 18-19 0.0 0.0 0.0 6.874283785558092E-5 5.499427028446474E-4 20-21 0.0 0.0 0.0 8.592854731947615E-5 6.70242669091914E-4 22-23 0.0 0.0 0.0 1.718570946389523E-4 7.733569258752853E-4 24-25 3.437141892779046E-5 0.0 0.0 4.1245702713348553E-4 8.249140542669711E-4 26-27 3.437141892779046E-5 0.0 0.0 7.217997974835997E-4 8.249140542669711E-4 28-29 3.437141892779046E-5 0.0 0.0 0.0032480990886761987 8.420997637308663E-4 30-31 3.437141892779046E-5 0.0 0.0 0.0158452241257114 8.936568921225519E-4 32-33 3.437141892779046E-5 0.0 0.0 0.04476877315344707 9.623997299781329E-4 34-35 3.437141892779046E-5 0.0 0.0 0.08264607681187217 0.0010139568583698187 36-37 3.437141892779046E-5 0.0 0.0 0.14243516003676368 0.0010311425678337137 38-39 3.437141892779046E-5 0.0 0.0 0.24616810236083525 0.0010655139867615042 40-41 3.437141892779046E-5 0.0 0.0 0.3599374990118217 0.0010655139867615042 42-43 3.437141892779046E-5 0.0 0.0 0.4800656081644493 0.0010655139867615042 44-45 5.155712839168569E-5 0.0 0.0 0.6264019242495172 0.0011342568246170853 46-47 6.874283785558092E-5 0.0 0.0 0.7963170337190495 0.001202999662472666 48-49 6.874283785558092E-5 0.0 0.0 0.9675898142362293 0.0012717425003282471 50-51 6.874283785558092E-5 0.0 0.0 1.1494318060737045 0.0012717425003282471 52-53 6.874283785558092E-5 0.0 0.0 1.3355014824392983 0.0014779710138949898 54-55 6.874283785558092E-5 0.0 0.0 1.5462670233045095 0.0016154566896061516 56-57 6.874283785558092E-5 0.0 0.0 1.789118283738813 0.0016841995274617327 58-59 6.874283785558092E-5 0.0 0.0 2.048278782454353 0.0017529423653173135 60-61 6.874283785558092E-5 0.0 0.0 2.322528334079193 0.001787313784245104 62-63 6.874283785558092E-5 0.0 0.0 2.6124856241540333 0.0018904280410284753 64-65 6.874283785558092E-5 0.0 0.0 2.9154696820025063 0.0019076137504923706 66-67 6.874283785558092E-5 0.0 0.0 3.259785371111647 0.001941985169420161 68-69 1.0311425678337138E-4 0.0 0.0 3.6360492941141693 0.0019591708788840563 70-71 1.0311425678337138E-4 0.0 0.0 4.025271242052469 0.0019763565883479514 72-73 1.0311425678337138E-4 0.0 0.0 4.438192283341479 0.0021825851019146945 74-75 1.0311425678337138E-4 3.437141892779046E-5 0.0 4.8643635066271536 0.0022685136492341705 76-77 1.2029996624726661E-4 3.437141892779046E-5 0.0 5.331694504078856 0.0022685136492341705 78-79 1.3748567571116184E-4 3.437141892779046E-5 0.0 5.856185171207475 0.0022685136492341705 80-81 1.3748567571116184E-4 3.437141892779046E-5 0.0 6.404048403206991 0.0023372564870897516 82-83 1.3748567571116184E-4 3.437141892779046E-5 0.0 6.971125258387142 0.0025434850006564942 84-85 1.3748567571116184E-4 3.437141892779046E-5 0.0 7.55870466495772 0.0025434850006564942 86-87 1.3748567571116184E-4 3.437141892779046E-5 0.0 8.184711317889567 0.0025606707101203897 88-89 1.3748567571116184E-4 3.437141892779046E-5 0.0 8.850520073939796 0.0025778564195842847 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 2455 0.0 54.216316 1 GTATCAA 4795 0.0 42.827095 1 TCAACGC 6045 0.0 32.973053 4 CAACGCA 6160 0.0 32.38309 5 ATCAACG 6430 0.0 31.221266 3 AACGCAG 6505 0.0 30.733343 6 TATCAAC 6680 0.0 30.265944 2 GTACATG 9755 0.0 28.507036 1 TACATGG 10485 0.0 25.98152 2 ACATGGG 10615 0.0 24.903265 3 ACGCAGA 8025 0.0 24.497982 7 CATGGGG 8655 0.0 23.413536 4 CGCAGAG 8250 0.0 23.311817 8 ATGGGGG 5505 0.0 21.569118 5 GTTATAT 555 0.0 19.699642 1 TAAGGCG 890 0.0 19.211542 5 GCAGAGT 9395 0.0 19.157215 9 AGAGTAC 7990 0.0 18.692345 10-11 GAGTACA 7305 0.0 16.984148 1 TCTATAC 675 0.0 16.874409 3 >>END_MODULE