##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921710_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3297116 Sequences flagged as poor quality 0 Sequence length 101 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.301144697365817 31.0 31.0 34.0 26.0 34.0 2 30.35297544884681 31.0 31.0 34.0 26.0 34.0 3 30.41536603504396 33.0 31.0 34.0 26.0 34.0 4 33.85892307095049 37.0 35.0 37.0 30.0 37.0 5 33.854743357528214 37.0 35.0 37.0 30.0 37.0 6 33.89949216224118 37.0 35.0 37.0 30.0 37.0 7 33.80994481237542 37.0 35.0 37.0 29.0 37.0 8 33.78516800743438 37.0 35.0 37.0 29.0 37.0 9 35.339705063455455 39.0 37.0 39.0 29.0 39.0 10-11 35.231801368226044 39.0 35.0 39.0 29.0 39.0 12-13 35.12649281978554 39.0 35.0 39.0 28.0 39.0 14-15 36.263388215640575 40.0 37.0 41.0 27.0 41.0 16-17 36.20503479404425 40.0 37.0 41.0 27.0 41.0 18-19 36.173070647195914 40.0 36.5 41.0 27.0 41.0 20-21 36.098340792377336 40.0 36.5 41.0 27.0 41.0 22-23 35.997691770626204 40.0 36.0 41.0 27.0 41.0 24-25 35.89046412076493 40.0 36.0 41.0 27.0 41.0 26-27 35.74274365839722 40.0 36.0 41.0 27.0 41.0 28-29 35.607921286360565 40.0 36.0 41.0 26.0 41.0 30-31 35.46166407248032 40.0 36.0 41.0 25.0 41.0 32-33 35.28527628387961 39.5 35.0 41.0 25.0 41.0 34-35 35.11266528080905 39.0 35.0 41.0 24.0 41.0 36-37 35.07616095399737 39.0 35.0 41.0 24.0 41.0 38-39 35.24999347914965 39.5 35.0 41.0 24.5 41.0 40-41 35.31307497218781 40.0 35.0 41.0 24.0 41.0 42-43 35.15476449721514 40.0 35.0 41.0 24.0 41.0 44-45 35.03216053059704 40.0 35.0 41.0 23.0 41.0 46-47 34.87718312003581 40.0 35.0 41.0 22.0 41.0 48-49 34.71739423180743 39.0 35.0 41.0 21.0 41.0 50-51 33.036920599699855 37.0 32.5 39.5 17.0 40.0 52-53 33.15304420590601 37.5 33.0 39.5 16.0 40.0 54-55 34.06218525523518 39.0 34.0 40.5 18.0 41.0 56-57 34.08362399139126 39.0 34.0 41.0 17.5 41.0 58-59 33.903690983271446 38.5 34.0 41.0 15.0 41.0 60-61 33.65738587905309 38.0 34.0 40.5 13.0 41.0 62-63 33.36935870621477 37.0 33.5 40.0 11.5 41.0 64-65 33.08654882024169 37.0 33.0 40.0 8.0 41.0 66-67 32.74724698797373 36.0 33.0 39.5 7.0 41.0 68-69 32.39374122718157 36.0 33.0 39.0 3.5 41.0 70-71 31.987366079931675 35.0 32.0 39.0 2.0 40.5 72-73 31.629301183215876 35.0 32.0 37.5 2.0 40.0 74-75 31.232874427226704 35.0 32.0 37.0 2.0 39.0 76-77 30.853072958306594 35.0 32.0 37.0 2.0 39.0 78-79 30.508247662502626 35.0 31.0 36.0 2.0 39.0 80-81 30.19050406476448 35.0 31.0 36.0 2.0 37.0 82-83 29.87185634354387 35.0 31.0 35.0 2.0 37.0 84-85 29.606603164705156 35.0 31.0 35.0 2.0 36.5 86-87 29.367830400871547 35.0 31.0 35.0 2.0 36.0 88-89 29.142276765512648 35.0 30.0 35.0 2.0 36.0 90-91 28.919082313148824 34.0 30.0 35.0 2.0 35.5 92-93 28.72753749034004 34.0 30.0 35.0 2.0 35.0 94-95 28.500762484547103 34.0 30.0 35.0 2.0 35.0 96-97 28.26728829073651 34.0 30.0 35.0 2.0 35.0 98-99 28.003590410528474 34.0 29.0 35.0 2.0 35.0 100-101 26.939380962028636 33.0 26.5 35.0 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 121534.0 3 19949.0 4 13555.0 5 10232.0 6 9317.0 7 9682.0 8 10172.0 9 10769.0 10 11836.0 11 12657.0 12 12453.0 13 12817.0 14 13712.0 15 14691.0 16 14837.0 17 15196.0 18 14369.0 19 13513.0 20 13624.0 21 14550.0 22 16071.0 23 18158.0 24 20968.0 25 24948.0 26 29425.0 27 35011.0 28 41193.0 29 48622.0 30 58505.0 31 70461.0 32 88379.0 33 114067.0 34 156719.0 35 228822.0 36 381921.0 37 692703.0 38 762649.0 39 139007.0 40 22.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.7546505177627 18.178077353055777 12.95071331204261 25.116558817138912 2 15.98646269653372 19.818187336854244 38.918685121107266 25.276664845504765 3 18.841323539142063 23.848088864014237 29.536849926337176 27.77373767050652 4 13.216929752357087 15.989922130520611 37.066218194797536 33.72692992232477 5 14.323300626121055 36.956104756152705 34.60907647903269 14.111518138693551 6 33.25084848277115 35.503024629887406 17.395587859257265 13.85053902808418 7 28.80392200281313 31.57334205320924 21.458933115498212 18.163802828479415 8 26.616086422629277 34.16960307522059 20.4154714755817 18.79883902656843 9 26.77836159273402 15.413038381241511 19.481470000427674 38.327130025596794 10-11 25.378647585576587 25.145745687993358 28.313308562860612 21.16229816356945 12-13 26.095216628538715 22.666249438395177 27.743778965688488 23.494754967377624 14-15 23.2866069843755 24.18536099897293 25.12597150602967 27.4020605106219 16-17 23.6189325951521 27.088175068969374 25.851648689198914 23.44124364667962 18-19 23.56410527460451 26.603687823394335 26.943854262135787 22.888352639865374 20-21 24.18576283608717 25.86947876019778 26.763946682910504 23.18081172080454 22-23 23.92631140280281 25.78093580464882 26.4885942844521 23.804158508096272 24-25 23.796953609351554 25.85861019197407 26.55540136032957 23.789034838344815 26-27 23.673618528645072 26.091642749385624 26.449529809663847 23.78520891230546 28-29 23.808175431965786 26.181177657503753 26.31007807431058 23.70056883621988 30-31 24.043822178475203 25.99158409121759 26.16059992735231 23.803993802954896 32-33 23.763364133051752 26.041517059909687 26.11881841310043 24.07630039393813 34-35 24.17105519575304 26.06583817303733 26.125984717682037 23.63712191352759 36-37 24.22070863529079 25.83403647692607 26.13457349463073 23.810681393152404 38-39 23.926686373554514 26.027059259578294 26.17898589802929 23.867268468837903 40-41 24.2337613888653 25.824729760879322 26.214635374331223 23.72687347592415 42-43 24.02732214938417 25.832347767509113 26.03444132667369 24.105888756433032 44-45 24.012622171491227 25.849878394522026 26.159187542299044 23.978311891687703 46-47 24.12361073395735 25.875393934678602 25.964137983014936 24.036857348349113 48-49 23.93281150791902 25.913029840580137 26.03314714947827 24.121011502022572 50-51 23.98642786005543 26.002175408162554 26.089474373612827 23.921922358169194 52-53 24.205334757377987 25.832702918004873 26.050929453561363 23.911032871055777 54-55 23.79130285727832 25.74749285703214 26.27381280546236 24.187391480227177 56-57 23.823341152499268 25.911249933894716 26.185016986778336 24.080391926827684 58-59 23.887993896489572 25.668772094069443 26.29030885343368 24.152925156007306 60-61 23.819046841745855 25.73881718424868 26.392297816700477 24.04983815730499 62-63 23.861318386507495 25.76247062715609 26.334267560603074 24.04194342573334 64-65 23.718609077543203 25.685974903218206 26.226813210192194 24.36860280904639 66-67 23.71148668383013 25.720104074888695 26.206424110945946 24.361985130335228 68-69 23.86917607329466 25.60263656059461 26.254832473737267 24.273354892373465 70-71 23.7835232683861 25.44357345718667 26.228495180769023 24.54440809365821 72-73 23.794279451848297 25.578487989103948 26.167236993204252 24.4599955658435 74-75 23.808816850030034 25.68467416956916 26.18107044535865 24.325438535042153 76-77 23.86138392711301 25.454878908390903 26.243254138229215 24.440483026266865 78-79 23.808045310417945 25.496821292054506 26.231149027846673 24.463984369680876 80-81 23.950465478587983 25.526161796557357 26.152676976859063 24.37069574799559 82-83 23.919847681534396 25.5379197987407 26.220431642954427 24.321800876770478 84-85 23.895125257360704 25.54811541370804 26.213837468253082 24.34292186067817 86-87 23.865553959599183 25.584231255142754 26.168762733849455 24.381452051408612 88-89 23.860720214246662 25.430041439686736 26.201318476068934 24.507919869997668 90-91 23.807520892677523 25.4730370946208 26.238789049359422 24.480652963342255 92-93 23.92131248611065 25.287842035197393 26.35586648105987 24.434978997632083 94-95 23.87464097304191 25.189399783690767 26.439417834794774 24.49654140847254 96-97 23.909736396968672 25.044211020458608 26.432633927885984 24.613418654686733 98-99 23.86864592604303 25.007953874369065 26.356076676412982 24.767323523174923 100-101 24.004874363968014 24.89932866520961 26.44170670235687 24.654090268465506 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 25.0 1 24.5 2 60.0 3 93.5 4 80.5 5 90.5 6 140.0 7 280.0 8 451.0 9 535.0 10 505.5 11 468.5 12 514.0 13 603.5 14 707.5 15 802.0 16 911.0 17 1001.5 18 1114.0 19 1226.5 20 1373.0 21 1540.0 22 1691.5 23 1916.5 24 2245.5 25 2701.0 26 3457.0 27 4560.0 28 6285.0 29 8974.5 30 13094.5 31 19191.5 32 27121.0 33 33937.5 34 40160.5 35 48332.0 36 57971.0 37 67781.5 38 76930.0 39 85681.0 40 93419.5 41 100983.5 42 108674.5 43 115703.5 44 122701.5 45 129896.0 46 134997.0 47 138695.5 48 142146.5 49 143485.5 50 143017.0 51 142407.0 52 140805.5 53 138520.0 54 135006.0 55 128110.0 56 118284.0 57 106113.0 58 95484.0 59 83426.0 60 68696.0 61 57155.0 62 47270.5 63 36509.5 64 26665.5 65 19695.5 66 14936.5 67 11688.5 68 9073.0 69 6961.0 70 5386.5 71 4019.0 72 2999.5 73 2291.0 74 1793.5 75 1409.5 76 1094.0 77 769.5 78 508.0 79 359.5 80 272.5 81 210.0 82 167.5 83 126.5 84 95.5 85 80.0 86 71.0 87 62.5 88 41.0 89 31.0 90 35.5 91 33.5 92 35.5 93 32.5 94 21.0 95 19.0 96 18.0 97 13.5 98 8.5 99 6.5 100 8.5 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.05410789307989164 2 0.07630911378307588 3 0.07200231960294996 4 0.07194166052999046 5 0.0675135482039455 6 0.0105850082314362 7 0.01313268929573603 8 0.017348494866422655 9 0.006642168489067415 10-11 0.01361796187941219 12-13 0.023020118188137755 14-15 0.04036861305456041 16-17 0.027493724818902335 18-19 0.010539513926716561 20-21 0.02083639156159504 22-23 0.037805767222020704 24-25 0.03487896695172387 26-27 0.020775732488635523 28-29 0.011676871544707557 30-31 0.011631377239987917 32-33 0.008446775909613128 34-35 0.005110526896839541 36-37 5.45931656635678E-4 38-39 0.0039428397423687854 40-41 0.001091863313271356 42-43 0.22900316519042702 44-45 0.19887077069778558 46-47 0.20486085415253819 48-49 0.21227642582183948 50-51 0.2031775648779115 52-53 0.21100258528968951 54-55 0.20675645018252314 56-57 0.20957709707514083 58-59 0.21855463987314974 60-61 0.2228462692850358 62-63 0.20850039853010935 64-65 0.20786347826403437 66-67 0.20602854130700893 68-69 0.20069054288657118 70-71 0.1923499203546372 72-73 0.20470920647013935 74-75 0.20322305918263114 76-77 0.1967628679124423 78-79 0.2153397090062952 80-81 0.2271985577698813 82-83 0.22533329127637608 84-85 0.21926738398042409 86-87 0.23961850295834297 88-89 0.2316115053276864 90-91 0.2385569691815514 92-93 0.23429566930614512 94-95 0.23788971937899667 96-97 0.24447122879510458 98-99 0.23773807169659789 100-101 0.24480485369638194 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 3297116.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 65.28881815618497 #Duplication Level Percentage of deduplicated Percentage of total 1 80.7181220957863 52.69990795420527 2 11.202126377623662 14.627471840625486 3 3.5376260168514015 6.9290226515640025 4 1.513700826845503 3.953109521071315 5 0.8381420940086614 2.736065338238779 6 0.5060229764582296 1.9822585255699687 7 0.33812950449431184 1.545325301251904 8 0.239065034866407 1.2486618871115893 9 0.1871027002098184 1.0994142753477023 >10 0.8735512906355032 9.692212547514579 >50 0.035258321884386955 1.5283822836662933 >100 0.009663859724316213 1.0608113451553003 >500 0.0010236191734564561 0.4763827057784513 >1k 4.652814380209536E-4 0.4209738228994035 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 9.098860943927966E-5 2 0.0 0.0 0.0 0.0 9.098860943927966E-5 3 0.0 0.0 0.0 0.0 9.098860943927966E-5 4 0.0 0.0 0.0 0.0 9.098860943927966E-5 5 0.0 0.0 0.0 0.0 9.098860943927966E-5 6 0.0 0.0 0.0 0.0 9.098860943927966E-5 7 0.0 0.0 0.0 0.0 9.098860943927966E-5 8 0.0 0.0 0.0 0.0 9.098860943927966E-5 9 3.0329536479759888E-5 0.0 0.0 3.0329536479759888E-5 1.5164768239879945E-4 10-11 3.0329536479759888E-5 0.0 0.0 6.0659072959519777E-5 1.5164768239879945E-4 12-13 3.0329536479759888E-5 0.0 0.0 6.0659072959519777E-5 1.5164768239879945E-4 14-15 3.0329536479759888E-5 0.0 0.0 6.0659072959519777E-5 2.2747152359819917E-4 16-17 3.0329536479759888E-5 0.0 0.0 1.0615337767915962E-4 3.6395443775711863E-4 18-19 3.0329536479759888E-5 0.0 0.0 1.5164768239879945E-4 3.6395443775711863E-4 20-21 3.0329536479759888E-5 0.0 0.0 1.5164768239879945E-4 3.7911920599699857E-4 22-23 3.0329536479759888E-5 0.0 0.0 1.8197721887855932E-4 4.246135107166384E-4 24-25 3.0329536479759888E-5 0.0 0.0 3.1846013303747883E-4 4.852725836761582E-4 26-27 3.0329536479759888E-5 0.0 0.0 6.217554978350777E-4 5.156021201559181E-4 28-29 3.0329536479759888E-5 0.0 0.0 0.002320209540701631 5.30766888395798E-4 30-31 3.0329536479759888E-5 0.0 0.0 0.011813354458866476 5.45931656635678E-4 32-33 3.0329536479759888E-5 0.0 0.0 0.03440885913628759 6.217554978350777E-4 34-35 3.0329536479759888E-5 0.0 0.0 0.06705860515674911 6.369202660749577E-4 36-37 3.0329536479759888E-5 0.0 0.0 0.11867947624530044 6.369202660749577E-4 38-39 3.0329536479759888E-5 0.0 0.0 0.201721747126883 6.369202660749577E-4 40-41 3.0329536479759888E-5 0.0 0.0 0.29868527525267535 6.369202660749577E-4 42-43 3.0329536479759888E-5 0.0 0.0 0.4000465861680329 6.672498025547175E-4 44-45 3.0329536479759888E-5 0.0 0.0 0.5268240486534292 7.430736437541172E-4 46-47 3.0329536479759888E-5 0.0 0.0 0.6761060272068073 8.03732716713637E-4 48-49 3.0329536479759888E-5 0.0 0.0 0.8318027027256548 8.795565579130367E-4 50-51 4.549430471963983E-5 0.0 0.0 0.9970835117721063 9.402156308725564E-4 52-53 6.0659072959519777E-5 0.0 0.0 1.164077939629664 0.0010160394720719562 54-55 6.0659072959519777E-5 0.0 0.0 1.3564885190572609 0.001046369008551716 56-57 6.0659072959519777E-5 0.0 0.0 1.57766666383591 0.001076698545031476 58-59 6.0659072959519777E-5 1.5164768239879944E-5 0.0 1.812204969433893 0.001091863313271356 60-61 6.0659072959519777E-5 3.0329536479759888E-5 0.0 2.051975120074635 0.001091863313271356 62-63 6.0659072959519777E-5 3.0329536479759888E-5 0.0 2.3044685112686363 0.0011221928497511158 64-65 6.0659072959519777E-5 3.0329536479759888E-5 0.0 2.580831247672208 0.0011221928497511158 66-67 6.0659072959519777E-5 3.0329536479759888E-5 0.0 2.9020665332975852 0.0011676871544707558 68-69 7.582384119939972E-5 3.0329536479759888E-5 0.0 3.2484450046646827 0.0012131814591903956 70-71 9.098860943927966E-5 6.0659072959519777E-5 0.0 3.609063193409028 0.0012435109956701555 72-73 9.098860943927966E-5 6.0659072959519777E-5 0.0 3.9807061686637653 0.0013041700686296752 74-75 9.098860943927966E-5 6.0659072959519777E-5 0.0 4.373898279587372 0.001334499605109435 76-77 9.098860943927966E-5 6.0659072959519777E-5 0.0 4.813054803046056 0.001334499605109435 78-79 9.098860943927966E-5 6.0659072959519777E-5 0.0 5.298388045795174 0.001334499605109435 80-81 9.098860943927966E-5 6.0659072959519777E-5 0.0 5.803526475865574 0.001364829141589195 82-83 9.098860943927966E-5 6.0659072959519777E-5 0.0 6.322980447154423 0.0015468063604677543 84-85 9.098860943927966E-5 6.0659072959519777E-5 0.0 6.864650803914694 0.0015468063604677543 86-87 9.098860943927966E-5 6.0659072959519777E-5 0.0 7.449161630952627 0.0015468063604677543 88-89 9.098860943927966E-5 6.0659072959519777E-5 0.0 8.077604791581491 0.0015468063604677543 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 2445 0.0 47.364925 1 GTATCAA 4175 0.0 41.94844 1 TCAACGC 4975 0.0 33.583694 4 CAACGCA 5150 0.0 31.979244 5 ATCAACG 5270 0.0 31.612745 3 TATCAAC 5605 0.0 29.978266 2 AACGCAG 5545 0.0 29.687674 6 GTACATG 7500 0.0 27.591238 1 TACATGG 7990 0.0 25.307062 2 ACGCAGA 6365 0.0 25.269825 7 ACATGGG 8320 0.0 24.074366 3 CGCAGAG 6670 0.0 23.829775 8 CATGGGG 6965 0.0 22.148338 4 TAAGGCG 1080 0.0 18.896904 5 GCAGAGT 8165 0.0 18.595222 9 AGAGTAC 6560 0.0 18.009968 10-11 CAGAGTA 7460 0.0 16.56862 10-11 ATGGGGG 3880 0.0 16.513836 5 GAGTACA 5630 0.0 16.185972 1 TCTATAC 880 0.0 16.18096 3 >>END_MODULE