##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921710_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3297116 Sequences flagged as poor quality 0 Sequence length 101 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.254480582424154 33.0 31.0 34.0 28.0 34.0 2 31.39455148074863 34.0 31.0 34.0 28.0 34.0 3 31.46661688578746 34.0 31.0 34.0 28.0 34.0 4 34.93799854175589 37.0 35.0 37.0 32.0 37.0 5 34.6685664077333 37.0 35.0 37.0 32.0 37.0 6 34.639726961380795 37.0 35.0 37.0 32.0 37.0 7 34.52250117981897 37.0 35.0 37.0 31.0 37.0 8 34.46381201025381 37.0 35.0 37.0 31.0 37.0 9 36.0439808608493 39.0 37.0 39.0 31.0 39.0 10-11 35.93135349196085 39.0 37.0 39.0 31.0 39.0 12-13 35.85568387645445 39.0 37.0 39.0 30.0 39.0 14-15 37.08512242214105 40.0 38.0 41.0 31.0 41.0 16-17 37.051527152820825 40.0 38.0 41.0 31.0 41.0 18-19 37.00883453903351 40.0 38.0 41.0 31.0 41.0 20-21 36.95192268030606 40.0 38.0 41.0 30.5 41.0 22-23 36.859181175305935 40.0 37.0 41.0 30.0 41.0 24-25 36.772383046274385 40.0 37.0 41.0 30.0 41.0 26-27 36.64413778587105 40.0 37.0 41.0 30.0 41.0 28-29 36.520899173702105 40.0 37.0 41.0 30.0 41.0 30-31 36.36134670421059 40.0 37.0 41.0 29.5 41.0 32-33 36.309650464223886 40.0 36.5 41.0 29.5 41.0 34-35 36.4371368796245 40.0 37.0 41.0 30.0 41.0 36-37 36.42812915893769 40.0 37.0 41.0 30.0 41.0 38-39 36.31989138386396 40.0 37.0 41.0 29.0 41.0 40-41 36.237354099764765 40.0 37.0 41.0 29.0 41.0 42-43 36.111537476995046 40.0 36.0 41.0 28.0 41.0 44-45 35.976781526643286 40.0 36.0 41.0 28.0 41.0 46-47 35.822844115887946 40.0 36.0 41.0 27.0 41.0 48-49 35.67732466798256 40.0 35.5 41.0 27.0 41.0 50-51 35.520660935193064 39.5 35.0 41.0 26.5 41.0 52-53 35.346052428849944 39.0 35.0 41.0 26.0 41.0 54-55 35.135914386997605 39.0 35.0 41.0 26.0 41.0 56-57 34.911731646687585 39.0 35.0 41.0 25.5 41.0 58-59 34.67623401785075 38.5 35.0 40.5 25.0 41.0 60-61 34.39997136891756 38.0 34.0 40.0 24.0 41.0 62-63 34.09958384842996 37.5 34.0 40.0 23.0 41.0 64-65 33.77078998737078 37.0 34.0 40.0 22.5 41.0 66-67 33.422003654102554 36.5 34.0 39.0 22.0 41.0 68-69 33.06423204400452 36.0 33.0 39.0 21.5 41.0 70-71 32.667912351279114 35.5 33.0 39.0 20.0 40.0 72-73 32.30515653680368 35.0 33.0 37.5 19.5 40.0 74-75 31.899026603856218 35.0 32.5 37.0 18.0 39.0 76-77 29.19763969481207 33.0 29.0 34.5 10.5 36.5 78-79 30.755958237441448 34.5 31.5 36.0 11.5 37.5 80-81 30.93394848710206 35.0 32.0 36.0 11.5 37.0 82-83 30.751701032053468 35.0 32.0 35.0 9.0 37.0 84-85 30.543829516462267 35.0 32.0 35.0 7.0 36.5 86-87 30.328054578607485 35.0 32.0 35.0 2.0 36.0 88-89 30.051924621396395 35.0 31.0 35.0 2.0 36.0 90-91 29.849716085209014 34.0 31.0 35.0 2.0 35.0 92-93 29.688019924079104 34.0 31.0 35.0 2.0 35.0 94-95 29.57718351431979 34.0 31.0 35.0 2.0 35.0 96-97 29.37177384720465 34.0 31.0 35.0 2.0 35.0 98-99 29.159595537433322 34.0 31.0 35.0 2.0 35.0 100-101 28.039993436688306 33.0 28.5 34.5 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 71652.0 3 23168.0 4 12313.0 5 8651.0 6 7639.0 7 7399.0 8 7783.0 9 8274.0 10 9265.0 11 10074.0 12 10647.0 13 11505.0 14 12066.0 15 13208.0 16 14415.0 17 14832.0 18 14169.0 19 12686.0 20 12296.0 21 12222.0 22 12843.0 23 14565.0 24 17194.0 25 20172.0 26 24313.0 27 29538.0 28 35808.0 29 42357.0 30 52399.0 31 64833.0 32 82183.0 33 107793.0 34 152967.0 35 229367.0 36 402636.0 37 778146.0 38 831615.0 39 104120.0 40 3.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.523619218611636 19.77625577018597 13.53301708385168 26.16710792735072 2 15.04298307124538 21.257997908472625 37.27007150500196 26.428947515280036 3 17.481999069393293 25.01229990287475 29.31307999881096 28.192621028921 4 12.865145160253183 17.32829669496389 35.91950397160006 33.887054173182875 5 14.077211163476457 37.25927824808838 34.64136141140708 14.022149177028078 6 33.19520990121172 36.138082183138806 17.070497241322624 13.596210674326844 7 28.506124746596722 31.81889869813498 21.51358945211512 18.161387103153178 8 26.598184595264467 34.56878678214537 20.136234211959785 18.696794410630382 9 26.570220762630132 15.351567855058784 19.396072203707725 38.68213917860336 10-11 25.301644999812623 25.357570229328335 28.26000771058102 21.080777060278024 12-13 25.992745457266846 22.809302641573755 27.780115686284322 23.417836214875074 14-15 23.12190291170848 24.362823490516607 25.062046028940404 27.453227568834503 16-17 23.50182705127754 27.333205747083205 25.76037664431582 23.40459055732343 18-19 23.43400162447461 26.7987962631018 26.91412607451595 22.853076037907645 20-21 24.08970534913123 25.986717743790727 26.74077308111615 23.18280382596189 22-23 23.835891730833854 25.86787968636833 26.504208526481932 23.79202005631588 24-25 23.718521773904072 25.98709077870086 26.53028016586088 23.764107281534184 26-27 23.557771560387252 26.2642573629647 26.462906174946532 23.715064901701517 28-29 23.704103401476917 26.330603070639384 26.352896500401663 23.612397027482036 30-31 23.92084904225206 26.119928294982515 26.177488270733008 23.781734392032426 32-33 23.7402774516959 26.160396491298314 26.078117691595093 24.02120836541069 34-35 24.06364605771691 26.180676897205394 26.135481055890118 23.62019598918758 36-37 24.095663997656033 25.96680231618237 26.196285263743118 23.741248422418476 38-39 23.86417402360123 26.134627959707817 26.201959530692886 23.799238485998067 40-41 24.064646599449045 25.983298465803408 26.189500917879194 23.762554016868354 42-43 23.946564459456837 25.96333389144488 26.04559467998369 24.044506969114593 44-45 23.93399343137338 25.952399295819934 26.145278390140508 23.968328882666178 46-47 24.039429201958875 26.015560215687117 25.94062841409064 24.004382168263373 48-49 23.844119839451714 26.063435226744495 25.991123284430255 24.101321649373528 50-51 23.896073644528844 26.135151456145188 26.016453611086593 23.952321288239375 52-53 24.11310841907415 25.94947785125426 25.94457953157505 23.992834198096542 54-55 23.700922373436203 25.880384296736697 26.15571172861496 24.26298160121214 56-57 23.738294568752696 26.02332760162906 26.064214904635218 24.174162924983023 58-59 23.7215225928688 25.86221096020432 26.140283104561586 24.275983342365294 60-61 23.74943526160563 25.968548147256172 26.210155327134245 24.071861264003957 62-63 23.75280245464767 25.930970087280507 26.13740487656307 24.17882258150875 64-65 23.545208252611445 25.817719684651376 26.093648212669468 24.543423850067708 66-67 23.55607416719712 25.908581547423502 26.004996779330664 24.530347506048713 68-69 23.6737702972977 25.79900292858246 26.045585262836557 24.481641511283282 70-71 23.58677679428829 25.65267126455759 26.036725866232207 24.72382607492191 72-73 23.575290821679328 25.799240049927093 25.924861787266163 24.700607341127412 74-75 23.571378839009572 25.889464313803895 25.848659893335117 24.690496953851415 76-77 23.602571606573193 25.66785456825854 25.965754570827173 24.763819254341094 78-79 23.53902904275121 25.7523109501335 25.952458719807087 24.7562012873082 80-81 23.618016560128343 25.81636722427556 25.831193158400463 24.73442305719563 82-83 23.589221934383488 25.820358089722962 25.87804550252062 24.71237447337293 84-85 23.535300523166832 25.812618545513967 25.85429771061975 24.797783220699447 86-87 23.508024896032584 25.86838305534079 25.763296486011345 24.86029556261528 88-89 23.38977668290871 25.758341063475992 25.783375622879152 25.06850663073614 90-91 23.294857288700534 25.7850440949191 25.84342056290551 25.076678053474854 92-93 23.386832842318896 25.632744060374062 25.936850844748655 25.043572252558388 94-95 23.23746628536624 25.595306704586402 25.955354120434798 25.211872889612557 96-97 23.195679820786275 25.483612394200428 25.99947370376802 25.321234081245276 98-99 23.07705139539927 25.48907595648884 25.876160305239328 25.55771234287257 100-101 23.01184507576866 25.50025272143759 25.88763760731562 25.60026459547813 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 26.0 1 23.0 2 44.5 3 74.5 4 70.0 5 72.0 6 123.5 7 236.0 8 350.5 9 369.0 10 316.0 11 288.5 12 298.5 13 347.0 14 391.5 15 405.5 16 460.5 17 542.0 18 613.0 19 722.5 20 859.0 21 1019.5 22 1232.5 23 1540.5 24 1934.5 25 2469.5 26 3328.5 27 4635.5 28 6665.5 29 9616.5 30 13941.0 31 19994.0 32 28158.5 33 35206.5 34 40922.5 35 48528.5 36 58286.0 37 68089.5 38 76995.0 39 85393.5 40 93177.5 41 101195.0 42 108848.0 43 115629.0 44 122292.0 45 129996.5 46 135306.0 47 139145.0 48 143598.0 49 145357.5 50 144520.5 51 142890.5 52 141372.5 53 139986.0 54 136579.5 55 129028.0 56 118951.5 57 106620.5 58 95161.5 59 83053.0 60 68398.0 61 56407.5 62 46547.0 63 35710.5 64 25654.5 65 18722.5 66 14127.5 67 11148.0 68 8535.0 69 6358.5 70 4855.5 71 3613.5 72 2635.5 73 2040.0 74 1590.5 75 1194.0 76 874.5 77 568.0 78 324.0 79 189.5 80 122.5 81 75.5 82 41.5 83 20.5 84 12.5 85 15.5 86 12.5 87 6.0 88 5.5 89 5.5 90 4.0 91 2.0 92 2.0 93 2.5 94 2.0 95 2.0 96 1.0 97 0.5 98 1.0 99 1.5 100 0.5 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.16411312189198074 2 1.2131814591903955E-4 3 0.010372701476077882 4 0.006308543587790057 5 0.025203844814680465 6 0.0019714198711843927 7 0.0 8 0.0 9 0.0 10-11 0.049876922740965134 12-13 2.881305965577189E-4 14-15 0.005110526896839541 16-17 0.0 18-19 0.0015164768239879945 20-21 3.1846013303747883E-4 22-23 0.0 24-25 4.701078154362782E-4 26-27 0.0027751525878980297 28-29 0.005474481334596659 30-31 0.01681772797802686 32-33 0.012071155518944434 34-35 0.01069116160911536 36-37 0.004215805570686624 38-39 0.0 40-41 0.0034424023904527476 42-43 0.00861358836025181 44-45 0.007036452463304294 46-47 0.0035788853046116666 48-49 0.008750071274410728 50-51 0.00269932874669863 52-53 0.0020320789441439125 54-55 0.0040186635835681855 56-57 0.007552054583460212 58-59 0.014846308106842464 60-61 0.007142605840983454 62-63 0.0204876018920778 64-65 0.04048993120047945 66-67 0.06046193097240134 68-69 0.050498678238800214 70-71 0.06890870688201448 72-73 0.033665785492533476 74-75 0.02743306574594282 76-77 0.225090654984538 78-79 0.08492270214332769 80-81 0.0671495937661884 82-83 0.027387571441223175 84-85 0.05169669492975072 86-87 0.06713442899794851 88-89 0.2929984871627204 90-91 0.2982151674372391 92-93 0.05239427426878521 94-95 0.009948087965361244 96-97 0.014967626252761506 98-99 9.402156308725564E-4 100-101 2.2747152359819915E-4 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 3297116.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 64.56531699265493 #Duplication Level Percentage of deduplicated Percentage of total 1 80.05527772125872 51.687943830080954 2 11.616677671813763 15.000689525643043 3 3.6202666316473446 7.012309880107257 4 1.5723574062025971 4.060790174288774 5 0.8747670738238829 2.823980670808808 6 0.5294866633558168 2.0511884557770887 7 0.35661600840888463 1.611751793930245 8 0.24596866392895753 1.270483580546636 9 0.18280913511441182 1.0622816782033575 >10 0.8998246724125035 9.982083643603573 >50 0.03490501789609826 1.5009738184536738 >100 0.009537055477150272 1.0407616534949216 >500 0.0011767802037224843 0.5782016117262478 >1k 3.2949845610732775E-4 0.31655968333534096 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 3.0329536479759888E-5 0.0 5 0.0 0.0 0.0 3.0329536479759888E-5 0.0 6 0.0 0.0 0.0 3.0329536479759888E-5 3.0329536479759888E-5 7 0.0 0.0 0.0 3.0329536479759888E-5 3.0329536479759888E-5 8 0.0 0.0 0.0 3.0329536479759888E-5 3.0329536479759888E-5 9 0.0 0.0 0.0 3.0329536479759888E-5 3.0329536479759888E-5 10-11 0.0 0.0 0.0 6.0659072959519777E-5 3.0329536479759888E-5 12-13 0.0 0.0 0.0 6.0659072959519777E-5 7.582384119939972E-5 14-15 0.0 0.0 0.0 6.0659072959519777E-5 1.364829141589195E-4 16-17 0.0 0.0 0.0 7.582384119939972E-5 1.8197721887855932E-4 18-19 0.0 3.0329536479759888E-5 0.0 9.098860943927966E-5 1.8197721887855932E-4 20-21 0.0 3.0329536479759888E-5 0.0 9.098860943927966E-5 2.2747152359819917E-4 22-23 0.0 3.0329536479759888E-5 0.0 1.2131814591903955E-4 2.426362918380791E-4 24-25 0.0 3.0329536479759888E-5 0.0 2.426362918380791E-4 3.1846013303747883E-4 26-27 0.0 3.0329536479759888E-5 0.0 5.914259613553178E-4 3.3362490127735876E-4 28-29 0.0 3.0329536479759888E-5 0.0 0.0023657038454212714 3.3362490127735876E-4 30-31 1.5164768239879944E-5 3.0329536479759888E-5 0.0 0.011965002141265276 3.487896695172387E-4 32-33 3.0329536479759888E-5 3.0329536479759888E-5 0.0 0.035000285097642914 3.6395443775711863E-4 34-35 3.0329536479759888E-5 3.0329536479759888E-5 0.0 0.06818079800650023 4.246135107166384E-4 36-37 3.0329536479759888E-5 3.0329536479759888E-5 0.0 0.1203021064469676 4.246135107166384E-4 38-39 3.0329536479759888E-5 3.0329536479759888E-5 0.0 0.20355668408390848 4.549430471963983E-4 40-41 3.0329536479759888E-5 3.0329536479759888E-5 0.0 0.30062636558738 4.549430471963983E-4 42-43 3.0329536479759888E-5 3.0329536479759888E-5 0.0 0.40326151703488744 4.549430471963983E-4 44-45 3.0329536479759888E-5 3.0329536479759888E-5 0.0 0.5304635930310004 5.156021201559181E-4 46-47 9.098860943927966E-5 3.0329536479759888E-5 0.0 0.6809132587388493 6.217554978350777E-4 48-49 9.098860943927966E-5 3.0329536479759888E-5 0.0 0.8362763093564194 6.520850343148376E-4 50-51 9.098860943927966E-5 3.0329536479759888E-5 0.0 1.0009353629050357 6.975793390344774E-4 52-53 9.098860943927966E-5 3.0329536479759888E-5 0.0 1.1677174840072353 7.279088755142373E-4 54-55 9.098860943927966E-5 3.0329536479759888E-5 0.0 1.3592788364133987 7.885679484737571E-4 56-57 9.098860943927966E-5 3.0329536479759888E-5 0.0 1.580335663046129 8.03732716713637E-4 58-59 9.098860943927966E-5 3.0329536479759888E-5 0.0 1.8145403437428347 8.18897484953517E-4 60-61 9.098860943927966E-5 3.0329536479759888E-5 0.0 2.0550838975638106 8.18897484953517E-4 62-63 9.098860943927966E-5 3.0329536479759888E-5 0.0 2.3074711353801325 8.18897484953517E-4 64-65 9.098860943927966E-5 3.0329536479759888E-5 0.0 2.5842129909897014 8.18897484953517E-4 66-67 9.098860943927966E-5 3.0329536479759888E-5 0.0 2.9069344239025865 8.18897484953517E-4 68-69 9.098860943927966E-5 3.0329536479759888E-5 0.0 3.2523726796388113 8.18897484953517E-4 70-71 9.098860943927966E-5 3.0329536479759888E-5 0.0 3.6139310840140295 8.18897484953517E-4 72-73 9.098860943927966E-5 3.0329536479759888E-5 0.0 3.9871815247021942 8.947213261529166E-4 74-75 9.098860943927966E-5 3.0329536479759888E-5 0.0 4.381480663707313 9.250508626326765E-4 76-77 9.098860943927966E-5 3.0329536479759888E-5 0.0 4.8220778401487845 9.402156308725564E-4 78-79 9.098860943927966E-5 3.0329536479759888E-5 0.0 5.3081238270051765 9.402156308725564E-4 80-81 9.098860943927966E-5 3.0329536479759888E-5 0.0 5.817174767281466 9.705451673523164E-4 82-83 9.098860943927966E-5 3.0329536479759888E-5 0.0 6.340283447716125 0.0011676871544707556 84-85 9.098860943927966E-5 3.0329536479759888E-5 0.0 6.8865942235578 0.0011828519227106355 86-87 9.098860943927966E-5 3.0329536479759888E-5 0.0 7.476412719479691 0.0011980166909505157 88-89 9.098860943927966E-5 3.0329536479759888E-5 0.0 8.110330361443152 0.0012131814591903956 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 4075 0.0 45.140167 1 GGTATCA 2440 0.0 41.102898 1 TCAACGC 5015 0.0 35.77239 4 CAACGCA 5150 0.0 34.95333 5 ATCAACG 5320 0.0 33.89995 3 TATCAAC 5530 0.0 33.042225 2 AACGCAG 5625 0.0 32.08226 6 ACGCAGA 6770 0.0 26.23455 7 CGCAGAG 6900 0.0 25.189682 8 GTACATG 7885 0.0 24.353392 1 TACATGG 8215 0.0 23.167036 2 ACATGGG 8520 0.0 21.668911 3 GCAGAGT 8680 0.0 19.42224 9 GTATAGC 1160 0.0 19.258377 1 CATGGGG 7240 0.0 19.010193 4 TAAGGTG 1425 0.0 18.331774 5 AGAGTAC 7085 0.0 18.030308 10-11 GTAAGGT 1385 0.0 16.105536 4 TCTATAC 830 0.0 16.010578 3 ATTATAC 1090 0.0 15.674838 3 >>END_MODULE