##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921709_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3496282 Sequences flagged as poor quality 0 Sequence length 101 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.28199698994532 31.0 31.0 34.0 26.0 34.0 2 30.336616153960122 31.0 31.0 34.0 26.0 34.0 3 30.398599140458348 33.0 31.0 34.0 26.0 34.0 4 33.84556480283913 37.0 35.0 37.0 30.0 37.0 5 33.83530733504906 37.0 35.0 37.0 30.0 37.0 6 33.87450154192368 37.0 35.0 37.0 30.0 37.0 7 33.77943283751139 37.0 35.0 37.0 29.0 37.0 8 33.75489906134574 37.0 35.0 37.0 29.0 37.0 9 35.30434844786547 39.0 37.0 39.0 29.0 39.0 10-11 35.195331354850666 39.0 35.0 39.0 28.5 39.0 12-13 35.07748845773882 39.0 35.0 39.0 27.5 39.0 14-15 36.2076495831858 40.0 37.0 41.0 27.0 41.0 16-17 36.14315264043346 40.0 36.0 41.0 27.0 41.0 18-19 36.10005400022081 40.0 36.5 41.0 27.0 41.0 20-21 36.02653003962495 40.0 36.0 41.0 27.0 41.0 22-23 35.922352230169075 40.0 36.0 41.0 27.0 41.0 24-25 35.810155330719894 40.0 36.0 41.0 27.0 41.0 26-27 35.662995147416595 40.0 36.0 41.0 26.5 41.0 28-29 35.52001755007176 40.0 36.0 41.0 25.0 41.0 30-31 35.37124608369691 40.0 35.5 41.0 25.0 41.0 32-33 35.19670624394714 39.0 35.0 41.0 24.5 41.0 34-35 35.02275774665773 39.0 35.0 41.0 24.0 41.0 36-37 34.992763312570325 39.0 35.0 41.0 24.0 41.0 38-39 35.185416536766766 39.5 35.0 41.0 24.0 41.0 40-41 35.245181881781846 40.0 35.0 41.0 24.0 41.0 42-43 35.08615423469846 40.0 35.0 41.0 23.0 41.0 44-45 34.966888254437144 40.0 35.0 41.0 23.0 41.0 46-47 34.80595286650219 40.0 35.0 41.0 21.5 41.0 48-49 34.64194607299983 39.0 35.0 41.0 20.5 41.0 50-51 32.95381679738648 37.0 32.5 39.5 17.0 40.0 52-53 33.06578330924107 37.5 32.5 39.5 15.5 40.0 54-55 33.970666982812034 38.5 34.0 40.5 17.5 41.0 56-57 33.989278610821444 39.0 34.0 41.0 16.0 41.0 58-59 33.795915632663494 38.0 34.0 41.0 14.0 41.0 60-61 33.537793576147465 38.0 34.0 40.0 13.0 41.0 62-63 33.24199749905757 37.0 33.0 40.0 9.5 41.0 64-65 32.95260551065389 37.0 33.0 40.0 7.5 41.0 66-67 32.61415926976142 36.0 33.0 39.0 6.5 41.0 68-69 32.25756761039298 36.0 33.0 39.0 2.0 41.0 70-71 31.851155455995826 35.0 32.0 39.0 2.0 40.5 72-73 31.497940240518357 35.0 32.0 37.5 2.0 40.0 74-75 31.10975015745297 35.0 32.0 37.0 2.0 39.0 76-77 30.745791243383685 35.0 31.5 36.5 2.0 39.0 78-79 30.411864374784415 35.0 31.0 36.0 2.0 38.5 80-81 30.104801042936465 35.0 31.0 35.5 2.0 37.0 82-83 29.798192193879096 35.0 31.0 35.0 2.0 37.0 84-85 29.543876752504517 35.0 31.0 35.0 2.0 36.0 86-87 29.316305292307657 35.0 30.5 35.0 2.0 36.0 88-89 29.098530810729798 35.0 30.0 35.0 2.0 36.0 90-91 28.879868671920626 34.0 30.0 35.0 2.0 35.5 92-93 28.689113749977835 34.0 30.0 35.0 2.0 35.0 94-95 28.465355912366334 34.0 30.0 35.0 2.0 35.0 96-97 28.230052667376373 34.0 29.0 35.0 2.0 35.0 98-99 27.969172681151008 34.0 29.0 35.0 2.0 35.0 100-101 26.905736150573667 33.0 26.5 35.0 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 131520.0 3 22442.0 4 15108.0 5 11246.0 6 10506.0 7 10314.0 8 11049.0 9 11637.0 10 12677.0 11 13279.0 12 13239.0 13 13562.0 14 14214.0 15 14678.0 16 14819.0 17 15657.0 18 14923.0 19 14345.0 20 14398.0 21 15175.0 22 16739.0 23 18985.0 24 22168.0 25 26291.0 26 31574.0 27 36812.0 28 44048.0 29 51464.0 30 61667.0 31 76195.0 32 94744.0 33 123077.0 34 173912.0 35 250606.0 36 416405.0 37 746584.0 38 773942.0 39 136256.0 40 25.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.67373963557279 17.566393143560283 12.283414770247743 25.47645245061918 2 16.091816506661154 19.336099727577523 39.018494847213866 25.553588918547455 3 19.042092486181108 23.74714112884876 29.033137003430788 28.177629381539344 4 13.27698839853404 15.100051374445291 36.106904639584656 35.516055587436014 5 14.35368602893049 37.20621539343905 34.13294815058188 14.307150427048576 6 34.228357628321014 34.69527334721618 16.94097691022678 14.135392114236023 7 29.487776167925546 31.348247271395817 20.988662222330287 18.17531433834835 8 27.284666479772525 34.556746211102656 19.717770772425865 18.440816536698954 9 27.501774135464718 14.977622009176592 18.806722636195108 38.71388121916358 10-11 26.122743324999103 24.81594107940518 27.650952629616455 21.41036296597926 12-13 26.49247620146979 22.190438877638844 27.540625679883934 23.776459241007437 14-15 23.662642018528306 23.710668834573585 24.509999864088545 28.11668928280956 16-17 24.1196063663991 26.776955025666005 25.323995299513 23.779443308421897 18-19 24.0989404852486 26.342528761935274 26.41461237893099 23.143918373885136 20-21 24.565899648171133 25.565987902190518 26.287897198514187 23.580215251124166 22-23 24.454140350360174 25.294554986959454 26.057603294706915 24.193701367973457 24-25 24.261518266486302 25.48585981006791 26.008556442881897 24.244065480563894 26-27 24.034521083264554 25.692016552497538 26.083643609222595 24.189818755015313 28-29 24.13541080555207 25.97996882590248 25.840503499720096 24.04411686882536 30-31 24.471917305470996 25.687929186974056 25.772357770089943 24.06779573746501 32-33 24.252692780269616 25.702062246842328 25.69594091022273 24.349304062665325 34-35 24.482028642847112 25.77498697831378 25.841389712109898 23.901594666729213 36-37 24.522968965989666 25.621013419764715 25.85399087768333 24.002026736562286 38-39 24.391000485105877 25.74466326329808 25.797135358268996 24.067200893327048 40-41 24.443856829806954 25.57671524402827 25.86674072708588 24.1126871990789 42-43 24.2514710030108 25.54927573452695 25.74496041018397 24.45429285227828 44-45 24.17134498826784 25.616627931983416 25.92332466942989 24.28870241031886 46-47 24.358611740843237 25.573858623060257 25.747575853706135 24.319953782390368 48-49 24.14755251058193 25.721311642195094 25.77569185748343 24.355443989739552 50-51 24.20239932496687 25.719389850976032 25.88773261397811 24.190478210078986 52-53 24.379440360374456 25.586205305512845 25.868620142229094 24.165734191883608 54-55 23.887276985772857 25.418889829649967 26.204505728126865 24.489327456450315 56-57 23.993066416842925 25.531370996134427 25.990204314875925 24.48535827214672 58-59 24.16162501458112 25.524454580133966 25.98613511044822 24.327785294836694 60-61 24.158454435822787 25.533122047376683 26.12411604915802 24.18430746764251 62-63 24.184374429978792 25.490452874640685 26.110807895849593 24.21436479953093 64-65 23.967878027751944 25.352193805928415 26.09239652271798 24.58753164360166 66-67 24.019044324852235 25.487517206763577 25.947520069602227 24.54591839878196 68-69 24.052308726999662 25.402738254772 26.088111471902565 24.45684154632577 70-71 23.998999992120282 25.288193531610926 26.044087739946377 24.668718736322422 72-73 23.971441847682883 25.551230140347776 25.864204633134374 24.61312337883497 74-75 23.95106340451353 25.58482412470708 26.000843932035533 24.46326853874386 76-77 23.99709154470496 25.20700894744006 26.05526065060569 24.74063885724929 78-79 23.976225468560667 25.274031610720638 26.070117585827795 24.679625334890904 80-81 24.17084766011504 25.426621845193942 25.84890122804262 24.5536292666484 82-83 24.106580479879295 25.467069224543913 25.95366132141004 24.47268897416675 84-85 24.038782182047314 25.465864677945582 25.947052178420275 24.54830096158683 86-87 24.012187766596643 25.562920248043813 25.888454817315363 24.536437168044177 88-89 23.928338684718675 25.341101548860944 25.994575855116885 24.735983911303492 90-91 24.09703208111214 25.22989765238446 26.000310452666074 24.67275981383733 92-93 24.175131177827115 25.134932931260096 26.116821003358094 24.573114887554695 94-95 24.14070322660725 25.00234343892998 26.15226247203998 24.704690862422794 96-97 24.05537308473727 24.89731895469019 26.15575124224929 24.89155671832325 98-99 23.892416402700338 24.907638062749932 26.167911249982083 25.032034284567644 100-101 24.19187709499609 24.84701018928695 26.164070669230533 24.797042046486425 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 59.0 1 50.5 2 83.0 3 125.0 4 117.5 5 127.5 6 193.5 7 372.0 8 570.0 9 645.5 10 614.5 11 555.5 12 589.5 13 686.0 14 780.5 15 908.0 16 1035.5 17 1114.0 18 1208.5 19 1339.5 20 1474.0 21 1668.0 22 1840.0 23 2008.5 24 2318.0 25 2867.0 26 3678.0 27 4842.0 28 6580.0 29 9355.5 30 13240.5 31 18648.5 32 26414.5 33 32865.5 34 38756.0 35 46037.0 36 55244.5 37 65156.0 38 74825.5 39 83745.0 40 91362.0 41 99493.0 42 106830.0 43 114452.5 44 122332.5 45 130748.5 46 136837.5 47 142225.5 48 148850.5 49 152453.0 50 152424.0 51 151658.5 52 151117.0 53 150369.5 54 149117.5 55 143056.5 56 133228.0 57 122017.0 58 110214.0 59 96559.5 60 80641.0 61 67507.5 62 56295.0 63 43605.5 64 32306.0 65 24387.5 66 18748.0 67 14991.0 68 11932.5 69 9147.5 70 7013.0 71 5300.5 72 3821.0 73 2910.5 74 2391.0 75 1867.0 76 1443.0 77 1020.5 78 665.5 79 465.5 80 349.5 81 264.0 82 195.5 83 156.5 84 127.0 85 103.5 86 80.5 87 69.5 88 59.5 89 55.5 90 54.5 91 53.0 92 47.0 93 37.0 94 30.0 95 21.5 96 18.0 97 16.5 98 13.0 99 10.0 100 4.5 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.05025338345133487 2 0.06990282820436108 3 0.06672802708705991 4 0.06655641621585444 5 0.062437755306923186 6 0.010353855896063304 7 0.01278500990480745 8 0.015502182032227377 9 0.006092185927794154 10-11 0.013113930741284599 12-13 0.021179641687941647 14-15 0.03888416323397255 16-17 0.02572732977488658 18-19 0.00978181965871174 20-21 0.01974955109456274 22-23 0.034937113196246754 24-25 0.032548861905303976 26-27 0.021079535346405123 28-29 0.0123273809149262 30-31 0.012241575479323466 32-33 0.008966668020485761 34-35 0.005462946066707434 36-37 6.006380492191419E-4 38-39 0.00394705003772579 40-41 0.001072567945034182 42-43 0.21468519987804185 44-45 0.18635510522320567 46-47 0.1917179449483766 48-49 0.19911151331614557 50-51 0.1909313951220182 52-53 0.19768142272276662 54-55 0.19422060348678968 56-57 0.19702358104981232 58-59 0.20538961102107897 60-61 0.20963698008341433 62-63 0.19530747233775766 64-65 0.19542187958522797 66-67 0.1927333092696756 68-69 0.18812841755899554 70-71 0.18046313197848457 72-73 0.19164644041870765 74-75 0.19061677519147482 76-77 0.18468189922895237 78-79 0.20267243889365905 80-81 0.21388434914574966 82-83 0.21238275402270185 84-85 0.20609035541183465 86-87 0.22498185215037003 88-89 0.21798870914874713 90-91 0.22388068239346826 92-93 0.2201481459447493 94-95 0.22363756699259385 96-97 0.23033039096960717 98-99 0.22400939054687238 100-101 0.2305163027467464 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 3496282.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 57.84136819664403 #Duplication Level Percentage of deduplicated Percentage of total 1 77.62909758341482 44.90173216095506 2 11.983698120887045 13.863069907353173 3 4.139633197748595 7.183261439700823 4 1.9633685011795594 4.542556815296801 5 1.0954627181475871 3.168153121303553 6 0.6910512946120703 2.398281142465457 7 0.4525818331176289 1.8324566713928212 8 0.3444076639615467 1.59368084007567 9 0.25002873949052207 1.301580394255267 >10 1.3608947252200665 13.863198263383067 >50 0.06860459759078634 2.6839200537081482 >100 0.019634290622611215 1.8375337512978078 >500 8.922971675724367E-4 0.36945367332834694 >1k 6.444368395250031E-4 0.4611217654841088 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 5.720362373515637E-5 2 0.0 0.0 2.8601811867578187E-5 0.0 5.720362373515637E-5 3 0.0 2.8601811867578187E-5 2.8601811867578187E-5 0.0 5.720362373515637E-5 4 0.0 2.8601811867578187E-5 2.8601811867578187E-5 0.0 5.720362373515637E-5 5 0.0 2.8601811867578187E-5 2.8601811867578187E-5 0.0 5.720362373515637E-5 6 0.0 2.8601811867578187E-5 2.8601811867578187E-5 0.0 8.580543560273456E-5 7 0.0 2.8601811867578187E-5 2.8601811867578187E-5 0.0 8.580543560273456E-5 8 0.0 2.8601811867578187E-5 2.8601811867578187E-5 0.0 8.580543560273456E-5 9 0.0 2.8601811867578187E-5 2.8601811867578187E-5 2.8601811867578187E-5 8.580543560273456E-5 10-11 0.0 2.8601811867578187E-5 2.8601811867578187E-5 4.290271780136728E-5 1.0010634153652365E-4 12-13 0.0 2.8601811867578187E-5 2.8601811867578187E-5 5.720362373515637E-5 1.859117771392582E-4 14-15 0.0 2.8601811867578187E-5 2.8601811867578187E-5 5.720362373515637E-5 2.8601811867578185E-4 16-17 0.0 2.8601811867578187E-5 2.8601811867578187E-5 5.720362373515637E-5 3.1461993054336006E-4 18-19 0.0 2.8601811867578187E-5 2.8601811867578187E-5 5.720362373515637E-5 3.432217424109382E-4 20-21 0.0 2.8601811867578187E-5 2.8601811867578187E-5 8.580543560273456E-5 4.147262720798837E-4 22-23 0.0 2.8601811867578187E-5 2.8601811867578187E-5 1.1440724747031275E-4 4.719298958150401E-4 24-25 0.0 2.8601811867578187E-5 2.8601811867578187E-5 2.145135890068364E-4 5.291335195501965E-4 26-27 0.0 2.8601811867578187E-5 2.8601811867578187E-5 7.007443907556656E-4 5.720362373515638E-4 28-29 0.0 2.8601811867578187E-5 2.8601811867578187E-5 0.003046092963897077 5.720362373515638E-4 30-31 0.0 2.8601811867578187E-5 2.8601811867578187E-5 0.013256939800622489 5.720362373515638E-4 32-33 0.0 2.8601811867578187E-5 2.8601811867578187E-5 0.0360668847650161 5.720362373515638E-4 34-35 0.0 2.8601811867578187E-5 2.8601811867578187E-5 0.06585567182509877 6.006380492191419E-4 36-37 0.0 2.8601811867578187E-5 2.8601811867578187E-5 0.11569432900435378 6.006380492191419E-4 38-39 0.0 2.8601811867578187E-5 2.8601811867578187E-5 0.19818195443044925 6.14938955152931E-4 40-41 0.0 2.8601811867578187E-5 2.8601811867578187E-5 0.2913952593068866 6.292398610867201E-4 42-43 0.0 2.8601811867578187E-5 2.8601811867578187E-5 0.3877118607709561 6.292398610867201E-4 44-45 0.0 2.8601811867578187E-5 2.8601811867578187E-5 0.5003743977173466 6.721425788880873E-4 46-47 0.0 2.8601811867578187E-5 2.8601811867578187E-5 0.630469738997026 7.72248920424611E-4 48-49 0.0 2.8601811867578187E-5 2.8601811867578187E-5 0.7738649227951293 8.866561678949238E-4 50-51 0.0 2.8601811867578187E-5 2.8601811867578187E-5 0.9263697836730562 8.866561678949238E-4 52-53 0.0 2.8601811867578187E-5 2.8601811867578187E-5 1.0814059049012636 9.867625094314475E-4 54-55 0.0 2.8601811867578187E-5 2.8601811867578187E-5 1.255590939174815 0.001072567945034182 56-57 0.0 2.8601811867578187E-5 2.8601811867578187E-5 1.4544450361841523 0.0011154706628355494 58-59 0.0 4.290271780136728E-5 2.8601811867578187E-5 1.6642822289506396 0.0011583733806369166 60-61 0.0 5.720362373515637E-5 2.8601811867578187E-5 1.8936687601286166 0.0011726742865707056 62-63 0.0 5.720362373515637E-5 2.8601811867578187E-5 2.1301342397438194 0.0012012760984382838 64-65 0.0 5.720362373515637E-5 2.8601811867578187E-5 2.3767533625720123 0.0012012760984382838 66-67 0.0 8.580543560273456E-5 2.8601811867578187E-5 2.66045473448652 0.0012012760984382838 68-69 0.0 8.580543560273456E-5 2.8601811867578187E-5 2.976647764682597 0.0012012760984382838 70-71 2.8601811867578187E-5 1.0010634153652365E-4 2.8601811867578187E-5 3.306912886317522 0.001229877910305862 72-73 2.8601811867578187E-5 1.1440724747031275E-4 2.8601811867578187E-5 3.647703474719717 0.0014014887815113311 74-75 2.8601811867578187E-5 1.4300905933789095E-4 2.8601811867578187E-5 3.9983616882162254 0.0014157896874451201 76-77 2.8601811867578187E-5 1.4300905933789095E-4 2.8601811867578187E-5 4.3858876372100415 0.0014300905933789093 78-79 2.8601811867578187E-5 1.4300905933789095E-4 2.8601811867578187E-5 4.8259122118867985 0.0014300905933789093 80-81 2.8601811867578187E-5 1.4300905933789095E-4 2.8601811867578187E-5 5.2830120682485 0.0015015951230478548 82-83 2.8601811867578187E-5 1.4300905933789095E-4 2.8601811867578187E-5 5.755900124761103 0.0016446041823857459 84-85 2.8601811867578187E-5 1.4300905933789095E-4 2.8601811867578187E-5 6.249710406654841 0.0016589050883195349 86-87 2.8601811867578187E-5 1.4300905933789095E-4 2.8601811867578187E-5 6.766616651631647 0.001687506900187113 88-89 2.8601811867578187E-5 1.4300905933789095E-4 2.8601811867578187E-5 7.3321459767833375 0.0017161087120546913 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 2435 0.0 45.221313 1 GTATCAA 4440 0.0 44.79043 1 TCAACGC 5540 0.0 34.95762 4 CAACGCA 5685 0.0 34.062584 5 GTACATG 10810 0.0 32.446877 1 ATCAACG 5995 0.0 32.14426 3 TATCAAC 6180 0.0 31.566479 2 AACGCAG 6195 0.0 31.317535 6 TACATGG 11510 0.0 29.856304 2 ACATGGG 11865 0.0 28.402542 3 CATGGGG 10065 0.0 25.843908 4 ACGCAGA 7435 0.0 25.269365 7 CGCAGAG 7905 0.0 23.708286 8 ATGGGGG 6145 0.0 22.244291 5 GAGTACA 7945 0.0 20.84902 1 GTATAGG 940 0.0 19.692049 1 GCAGAGT 9110 0.0 19.688074 9 AGAGTAC 7645 0.0 19.116266 10-11 AGTACAT 8155 0.0 18.974329 2 CAGAGTA 8375 0.0 16.260239 10-11 >>END_MODULE