##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921709_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3496282 Sequences flagged as poor quality 0 Sequence length 101 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.21723219122485 33.0 31.0 34.0 28.0 34.0 2 31.35078749368615 34.0 31.0 34.0 28.0 34.0 3 31.42064084075598 34.0 31.0 34.0 28.0 34.0 4 34.900179390564034 37.0 35.0 37.0 32.0 37.0 5 34.619990321146865 37.0 35.0 37.0 32.0 37.0 6 34.58812161032777 37.0 35.0 37.0 32.0 37.0 7 34.46503542906436 37.0 35.0 37.0 31.0 37.0 8 34.40886404471951 37.0 35.0 37.0 31.0 37.0 9 35.98489252297154 39.0 37.0 39.0 31.0 39.0 10-11 35.86708609316983 39.0 37.0 39.0 30.0 39.0 12-13 35.774786044146325 39.0 37.0 39.0 30.0 39.0 14-15 36.99686967470015 40.0 38.0 41.0 31.0 41.0 16-17 36.95670729649382 40.0 38.0 41.0 31.0 41.0 18-19 36.91035763133523 40.0 37.5 41.0 30.5 41.0 20-21 36.849631980486706 40.0 37.0 41.0 30.0 41.0 22-23 36.755915569739514 40.0 37.0 41.0 30.0 41.0 24-25 36.66831050813407 40.0 37.0 41.0 30.0 41.0 26-27 36.53382421669648 40.0 37.0 41.0 30.0 41.0 28-29 36.41088047245617 40.0 37.0 41.0 29.5 41.0 30-31 36.24764249565682 40.0 36.5 41.0 29.0 41.0 32-33 36.2001414645615 40.0 36.5 41.0 28.5 41.0 34-35 36.33382490313997 40.0 37.0 41.0 30.0 41.0 36-37 36.329981963697435 40.0 37.0 41.0 29.0 41.0 38-39 36.2237824351697 40.0 36.5 41.0 29.0 41.0 40-41 36.1367874502114 40.0 36.0 41.0 28.5 41.0 42-43 36.01495073909942 40.0 36.0 41.0 28.0 41.0 44-45 35.884274781038826 40.0 36.0 41.0 27.5 41.0 46-47 35.72850001801914 40.0 35.5 41.0 27.0 41.0 48-49 35.580142419862014 40.0 35.0 41.0 26.5 41.0 50-51 35.42065385458038 39.5 35.0 41.0 26.0 41.0 52-53 35.24204669417398 39.0 35.0 41.0 26.0 41.0 54-55 35.01925259461336 39.0 35.0 41.0 25.5 41.0 56-57 34.79412916349425 39.0 35.0 41.0 25.0 41.0 58-59 34.54918682188679 38.0 34.5 40.0 24.0 41.0 60-61 34.26617918691913 38.0 34.0 40.0 23.5 41.0 62-63 33.95721912591719 37.0 34.0 40.0 23.0 41.0 64-65 33.621629920012175 37.0 34.0 40.0 22.0 41.0 66-67 33.27299299656035 36.0 34.0 39.0 22.0 41.0 68-69 32.91606383581187 36.0 33.0 39.0 21.0 40.5 70-71 32.52277733889886 35.0 33.0 38.5 20.0 40.0 72-73 32.16931743492087 35.0 33.0 37.0 19.0 39.5 74-75 31.777569429468215 35.0 32.5 37.0 17.5 39.0 76-77 29.10770183869608 33.0 28.5 34.5 9.5 36.5 78-79 30.674777520806387 34.5 31.0 35.5 11.0 37.0 80-81 30.864569419743603 35.0 32.0 35.5 11.0 37.0 82-83 30.698649451045426 35.0 32.0 35.0 8.0 37.0 84-85 30.505965193883103 35.0 32.0 35.0 7.0 36.0 86-87 30.30651188891514 35.0 32.0 35.0 2.0 36.0 88-89 30.047425808330104 35.0 31.0 35.0 2.0 36.0 90-91 29.853320613154203 34.0 31.0 35.0 2.0 35.0 92-93 29.69746905426965 34.0 31.0 35.0 2.0 35.0 94-95 29.593469720119828 34.0 31.0 35.0 2.0 35.0 96-97 29.392742204433166 34.0 31.0 35.0 2.0 35.0 98-99 29.197822715673393 34.0 31.0 35.0 2.0 35.0 100-101 28.093569397434187 33.0 28.5 34.5 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 79216.0 3 26406.0 4 14106.0 5 9611.0 6 8381.0 7 8352.0 8 8358.0 9 9085.0 10 10001.0 11 10600.0 12 11213.0 13 12107.0 14 12691.0 15 13275.0 16 14398.0 17 15413.0 18 14197.0 19 12770.0 20 12636.0 21 12481.0 22 13103.0 23 15315.0 24 17970.0 25 21468.0 26 25911.0 27 31199.0 28 38050.0 29 45405.0 30 55258.0 31 69086.0 32 87735.0 33 116014.0 34 167937.0 35 251408.0 36 439909.0 37 841171.0 38 844211.0 39 99832.0 40 3.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.200165802467616 19.3042999500702 12.958746180427344 26.536788067034845 2 15.169126948964884 20.77986339190894 37.30271525813586 26.748294400990307 3 17.569610867939726 24.9866559265707 28.904922118094905 28.538811087394674 4 12.942157067176268 16.46044945883536 35.019197264586445 35.57819620940192 5 14.08292511415499 37.53878952368883 34.232793500839804 14.145491861316383 6 34.28882377084933 35.33933124822129 16.59551829621462 13.776326684714757 7 29.290829515468147 31.528206248809447 21.026478985390767 18.154485250331636 8 27.212278643427506 35.04245366935505 19.438763806809632 18.306503880407814 9 27.193674419668906 14.897662658597138 18.783364032628967 39.12529888910499 10-11 26.002208482714 25.111790487729014 27.620470042266774 21.26553098729021 12-13 26.306714386107018 22.371905594220582 27.66278853257573 23.658591487096672 14-15 23.492652579641746 23.886946261932852 24.538910937108945 28.081490221316457 16-17 23.99374878710424 27.034608054299973 25.295174315912494 23.676468842683292 18-19 24.0291336418368 26.50855935516884 26.407479135400873 23.05482786759349 20-21 24.4758880996513 25.700750070467926 26.2885047685799 23.534857061300873 22-23 24.35556175897164 25.4147299066165 26.073501232666764 24.156207101745096 24-25 24.11344038843704 25.651480378506452 26.080008740748706 24.155070492307797 26-27 23.94029049875379 25.86705714843055 26.109477906546374 24.083174446269286 28-29 24.0460176348208 26.109920655748866 25.911012988922355 23.933048720507983 30-31 24.393396890165437 25.807055577876525 25.800862283883717 23.998685248074324 32-33 24.139252784772506 25.819884910467643 25.75666776414684 24.28419454061301 34-35 24.31588945419471 25.931432835961783 25.881088787307693 23.871588922535814 36-37 24.397717609525195 25.75400603919902 25.927138897286994 23.92113745398879 38-39 24.321279004382372 25.876502524681932 25.84740018110667 23.954818289829024 40-41 24.383913614974595 25.66792180509968 25.87983993302369 24.068324646902038 42-43 24.167623840075308 25.716235305761302 25.745325940250353 24.370814913913033 44-45 24.09114968701119 25.694129505815344 25.929981294611938 24.28473951256153 46-47 24.293177379216292 25.75765701563989 25.675552567512355 24.273613037631467 48-49 24.047021146415045 25.86683653898687 25.78917544513537 24.296966869462715 50-51 24.08344909024577 25.857222065782153 25.866060254422564 24.193268589549515 52-53 24.370287857988362 25.68798220821599 25.71435354263268 24.227376391162974 54-55 23.797357997514972 25.606026195777282 26.10111563165735 24.4955001750504 56-57 23.92993006478936 25.701372259867394 25.849712308691466 24.518985366651776 58-59 24.02119085644781 25.646420098902865 25.904032693385375 24.428356351263947 60-61 24.079256139531903 25.7055856468133 25.997745443977628 24.217412769677164 62-63 24.062482567046246 25.60343409521003 25.997322298303406 24.33676103944031 64-65 23.793962979913655 25.51759549272916 25.968582956842805 24.71985857051438 66-67 23.84823247160344 25.679109191216348 25.798493663593646 24.674164673586567 68-69 23.89148221834475 25.611578625814396 25.888524749663226 24.608414406177634 70-71 23.777627420574476 25.440023790020444 25.895345662242384 24.887003127162696 72-73 23.709556421017215 25.725326426934043 25.692795317809193 24.87232183423955 74-75 23.620616997043786 25.726071988805693 25.792903655686455 24.860407358464062 76-77 23.611354563600724 25.35088331570204 25.936478320673245 25.101283800023992 78-79 23.512291788976764 25.43293838204603 25.987480789383515 25.067289039593692 80-81 23.676691557168496 25.563785607775678 25.718308972315164 25.041213862740662 82-83 23.553585064037954 25.56605935487415 25.826634193037663 25.05372138805024 84-85 23.451639174909616 25.552525080826964 25.804993100590583 25.190842643672834 86-87 23.358847098010806 25.673174427314105 25.78991972079586 25.178058753879228 88-89 23.21971877165296 25.45046405015118 25.88186309656394 25.447954081631924 90-91 23.221332903415696 25.408548457101514 25.915743218685122 25.454375420797664 92-93 23.29343006038931 25.201730510615665 26.030658087083825 25.4741813419112 94-95 23.13614667058359 25.129686038931414 26.11116657222386 25.623000718261142 96-97 22.94366257416611 25.04653819478861 26.16638697265235 25.843412258392927 98-99 22.746696107692372 25.024347480375432 26.135865375952267 26.093091035979928 100-101 22.762368520782832 25.04532681210717 26.12486145969639 26.067443207413604 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 60.0 1 52.0 2 69.5 3 99.0 4 89.0 5 101.5 6 173.0 7 359.0 8 525.5 9 539.0 10 464.0 11 401.0 12 405.0 13 440.5 14 461.0 15 516.0 16 594.0 17 636.5 18 749.0 19 874.0 20 970.5 21 1140.0 22 1369.5 23 1680.5 24 2084.5 25 2688.0 26 3681.5 27 5145.0 28 7230.0 29 10200.5 30 14312.5 31 19993.5 32 27848.0 33 34203.0 34 39402.0 35 46532.0 36 55905.0 37 65849.5 38 74917.5 39 83547.0 40 91700.5 41 99802.0 42 107030.0 43 114908.0 44 123483.5 45 131599.5 46 137988.0 47 143960.0 48 150091.0 49 153725.0 50 154109.5 51 153102.0 52 152334.0 53 151601.0 54 149213.5 55 142562.0 56 132978.0 57 121953.0 58 109996.0 59 95661.0 60 79628.5 61 66372.5 62 54800.5 63 42166.5 64 30815.5 65 22938.5 66 17604.0 67 14103.5 68 11257.5 69 8465.0 70 6410.5 71 4851.0 72 3483.5 73 2649.0 74 2091.5 75 1554.5 76 1136.0 77 717.5 78 424.5 79 275.0 80 170.0 81 102.0 82 56.5 83 30.5 84 26.0 85 18.0 86 10.0 87 9.5 88 7.0 89 4.5 90 5.5 91 5.5 92 3.0 93 3.0 94 2.0 95 1.0 96 1.5 97 1.5 98 1.5 99 1.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.15390634965943822 2 8.580543560273456E-5 3 0.00995343052991721 4 0.006034982304058997 5 0.02331047667207622 6 0.0019163213951277386 7 0.0 8 0.0 9 5.720362373515637E-5 10-11 0.045047853691435644 12-13 3.7182355427851644E-4 14-15 0.0044904844632097755 16-17 1.4300905933789093E-5 18-19 0.0014014887815113311 20-21 3.0031902460957095E-4 22-23 1.4300905933789093E-5 24-25 4.004253661460946E-4 26-27 0.0025169594443468805 28-29 0.005362839725170911 30-31 0.016174324611115464 32-33 0.011297715687693385 34-35 0.009653111505307638 36-37 0.003518022859712117 38-39 0.0 40-41 0.0034465183300431716 42-43 0.008909464396750605 44-45 0.0065927176354767724 46-47 0.003589527389381063 48-49 0.009238385233227755 50-51 0.002588463974015826 52-53 0.0017590114298560585 54-55 0.004175864532666415 56-57 0.007450771991504118 58-59 0.015130358477948863 60-61 0.007150452966894548 62-63 0.021365553465080907 64-65 0.03991382846120536 66-67 0.060321221228722396 68-69 0.04975285174365226 70-71 0.06807231224483609 72-73 0.03334971263759617 74-75 0.026685490472450446 76-77 0.22004803960321279 78-79 0.07925562068505916 80-81 0.06612738903784077 82-83 0.026685490472450446 84-85 0.050911225124289174 86-87 0.06724285970067632 88-89 0.2912379493416149 90-91 0.29582854014636123 92-93 0.04880899195202218 94-95 0.009696014223109006 96-97 0.014229401404120148 98-99 7.722489204246111E-4 100-101 2.002126830730473E-4 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 3496282.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 57.12547882530259 #Duplication Level Percentage of deduplicated Percentage of total 1 77.1332330333906 44.062728703760854 2 12.236325612618296 13.980119193662684 3 4.197837239125234 7.194103869471458 4 2.005712711371722 4.583091960924222 5 1.1298873550941269 3.227267808920335 6 0.6889362768040866 2.3613488815532797 7 0.4790929256492714 1.9157888945670807 8 0.34758801099868986 1.5884905249787762 9 0.26305215046585806 1.3524282046248919 >10 1.427205897145331 14.409341733881684 >50 0.07042188719314985 2.7321669913134046 >100 0.019147959980152483 1.7820601517573014 >500 0.0010057678500665298 0.4208576545683797 >1k 5.53172313439992E-4 0.39020542601567815 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 2.8601811867578187E-5 2 0.0 0.0 0.0 0.0 2.8601811867578187E-5 3 0.0 0.0 0.0 0.0 2.8601811867578187E-5 4 0.0 0.0 0.0 0.0 2.8601811867578187E-5 5 0.0 0.0 0.0 0.0 2.8601811867578187E-5 6 0.0 0.0 0.0 0.0 2.8601811867578187E-5 7 0.0 0.0 0.0 0.0 2.8601811867578187E-5 8 0.0 0.0 0.0 0.0 2.8601811867578187E-5 9 0.0 0.0 0.0 0.0 5.720362373515637E-5 10-11 0.0 0.0 0.0 1.4300905933789093E-5 5.720362373515637E-5 12-13 0.0 0.0 0.0 2.8601811867578187E-5 1.7161087120546914E-4 14-15 0.0 1.4300905933789093E-5 0.0 2.8601811867578187E-5 2.717172127419928E-4 16-17 0.0 2.8601811867578187E-5 0.0 2.8601811867578187E-5 3.2892083647714917E-4 18-19 0.0 2.8601811867578187E-5 0.0 2.8601811867578187E-5 4.004253661460946E-4 20-21 0.0 5.720362373515637E-5 0.0 5.720362373515637E-5 4.004253661460946E-4 22-23 0.0 5.720362373515637E-5 0.0 1.1440724747031275E-4 4.290271780136728E-4 24-25 0.0 5.720362373515637E-5 0.0 2.4311540087441457E-4 4.862308017488292E-4 26-27 0.0 5.720362373515637E-5 0.0 7.57948014490822E-4 4.862308017488292E-4 28-29 0.0 5.720362373515637E-5 0.0 0.003131898399499812 5.148326136164074E-4 30-31 0.0 5.720362373515637E-5 0.0 0.013428550671827959 5.434344254839856E-4 32-33 0.0 5.720362373515637E-5 0.0 0.036796230967639336 5.434344254839856E-4 34-35 2.8601811867578187E-5 5.720362373515637E-5 0.0 0.06705694792353706 5.720362373515638E-4 36-37 2.8601811867578187E-5 5.720362373515637E-5 0.0 0.11715302140960025 5.720362373515638E-4 38-39 2.8601811867578187E-5 5.720362373515637E-5 0.0 0.19999816948404048 6.006380492191419E-4 40-41 2.8601811867578187E-5 5.720362373515637E-5 0.0 0.2936977051622266 6.006380492191419E-4 42-43 2.8601811867578187E-5 5.720362373515637E-5 0.0 0.39037182927464087 6.14938955152931E-4 44-45 2.8601811867578187E-5 5.720362373515637E-5 0.0 0.502519533607415 6.292398610867201E-4 46-47 2.8601811867578187E-5 5.720362373515637E-5 0.0 0.6324146622040213 6.435407670205092E-4 48-49 2.8601811867578187E-5 5.720362373515637E-5 0.0 0.7753379161063095 6.864434848218765E-4 50-51 2.8601811867578187E-5 5.720362373515637E-5 0.0 0.9275567588655607 6.864434848218765E-4 52-53 5.720362373515637E-5 5.720362373515637E-5 0.0 1.0814774094309327 7.007443907556656E-4 54-55 5.720362373515637E-5 5.720362373515637E-5 0.0 1.2556767446104176 7.436471085570329E-4 56-57 5.720362373515637E-5 5.720362373515637E-5 0.0 1.4545451425256888 7.436471085570329E-4 58-59 5.720362373515637E-5 7.150452966894546E-5 0.0 1.6642107244209705 7.436471085570329E-4 60-61 5.720362373515637E-5 8.580543560273456E-5 0.0 1.8933541401980734 7.436471085570329E-4 62-63 5.720362373515637E-5 8.580543560273456E-5 0.0 2.1285611400911026 8.294525441597674E-4 64-65 5.720362373515637E-5 8.580543560273456E-5 0.0 2.3743651112810698 8.294525441597674E-4 66-67 5.720362373515637E-5 8.580543560273456E-5 0.0 2.6569796143446096 8.294525441597674E-4 68-69 5.720362373515637E-5 8.580543560273456E-5 0.0 2.971771155759175 8.580543560273456E-4 70-71 5.720362373515637E-5 8.580543560273456E-5 0.0 3.301449940250815 9.438597916300802E-4 72-73 5.720362373515637E-5 8.580543560273456E-5 0.0 3.641611288791922 0.0010296652272328147 74-75 7.150452966894546E-5 8.580543560273456E-5 0.0 3.9924268122537026 0.001043966133166604 76-77 8.580543560273456E-5 8.580543560273456E-5 0.0 4.381025329192553 0.001058267039100393 78-79 8.580543560273456E-5 8.580543560273456E-5 0.0 4.821893657319404 0.001058267039100393 80-81 8.580543560273456E-5 8.580543560273456E-5 0.0 5.282726050129824 0.0011011697569017604 82-83 8.580543560273456E-5 8.580543560273456E-5 0.0 5.756886887270534 0.0012012760984382838 84-85 8.580543560273456E-5 8.580543560273456E-5 0.0 6.253185526796751 0.0012012760984382838 86-87 8.580543560273456E-5 8.580543560273456E-5 0.0 6.772694536653508 0.0012155770043720728 88-89 8.580543560273456E-5 8.580543560273456E-5 0.0 7.341298556580963 0.001229877910305862 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 2500 0.0 48.108303 1 GTATCAA 4680 0.0 41.44325 1 TCAACGC 5610 0.0 33.248558 4 CAACGCA 5690 0.0 32.63901 5 ATCAACG 5820 0.0 32.130417 3 TATCAAC 6105 0.0 30.941442 2 AACGCAG 6110 0.0 30.54564 6 GTACATG 10175 0.0 29.153433 1 TACATGG 10610 0.0 27.421309 2 ACATGGG 10940 0.0 25.943407 3 ACGCAGA 7460 0.0 24.572334 7 CATGGGG 9445 0.0 23.11527 4 CGCAGAG 7965 0.0 22.59703 8 ATGGGGG 5755 0.0 20.715763 5 GAGTACA 7440 0.0 18.721222 1 GCAGAGT 9095 0.0 18.432156 9 AGAGTAC 7555 0.0 17.789186 10-11 AGTACAT 7760 0.0 17.003025 2 CAGAGTA 8280 0.0 16.23156 10-11 TAAGGCG 1015 0.0 15.910557 5 >>END_MODULE