##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921708_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2889908 Sequences flagged as poor quality 0 Sequence length 101 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.13252567209752 33.0 31.0 34.0 28.0 34.0 2 31.27951443436954 33.0 31.0 34.0 28.0 34.0 3 31.349527043767484 34.0 31.0 34.0 28.0 34.0 4 34.83363345822774 37.0 35.0 37.0 32.0 37.0 5 34.55304840154081 37.0 35.0 37.0 32.0 37.0 6 34.520073303371596 37.0 35.0 37.0 31.0 37.0 7 34.39323293336674 37.0 35.0 37.0 31.0 37.0 8 34.334838686906295 37.0 35.0 37.0 30.0 37.0 9 35.89813793380274 39.0 37.0 39.0 30.0 39.0 10-11 35.783232026763486 39.0 37.0 39.0 30.0 39.0 12-13 35.69680038257273 39.0 37.0 39.0 30.0 39.0 14-15 36.90203286748229 40.0 37.0 41.0 30.0 41.0 16-17 36.86366642121479 40.0 37.0 41.0 30.0 41.0 18-19 36.82379906211547 40.0 37.0 41.0 30.0 41.0 20-21 36.76156455499621 40.0 37.0 41.0 30.0 41.0 22-23 36.66541322422721 40.0 37.0 41.0 30.0 41.0 24-25 36.57290232076592 40.0 37.0 41.0 30.0 41.0 26-27 36.43847312786428 40.0 37.0 41.0 29.5 41.0 28-29 36.305242243005665 40.0 37.0 41.0 29.0 41.0 30-31 36.13924024571024 40.0 36.0 41.0 28.5 41.0 32-33 36.07517367334877 40.0 36.0 41.0 28.0 41.0 34-35 36.19800422712419 40.0 37.0 41.0 29.0 41.0 36-37 36.18047910175687 40.0 36.5 41.0 28.5 41.0 38-39 36.06770699966919 40.0 36.0 41.0 28.0 41.0 40-41 35.97135929586686 40.0 36.0 41.0 27.5 41.0 42-43 35.83485079801848 40.0 36.0 41.0 27.0 41.0 44-45 35.693159609233234 40.0 35.5 41.0 26.5 41.0 46-47 35.524641960920555 40.0 35.0 41.0 26.0 41.0 48-49 35.36996160431404 40.0 35.0 41.0 25.5 41.0 50-51 35.206316948498014 39.0 35.0 41.0 24.5 41.0 52-53 35.02523661652897 39.0 35.0 41.0 24.0 41.0 54-55 34.8047839239173 39.0 35.0 41.0 24.0 41.0 56-57 34.57390563990272 39.0 34.5 41.0 23.0 41.0 58-59 34.33410942493671 38.0 34.0 40.0 23.0 41.0 60-61 34.051049375966294 38.0 34.0 40.0 22.0 41.0 62-63 33.746925853695 37.0 34.0 40.0 22.0 41.0 64-65 33.40633110119769 37.0 34.0 40.0 20.5 41.0 66-67 33.056877935214544 36.0 33.0 39.0 20.0 41.0 68-69 32.699349252640566 36.0 33.0 39.0 18.5 40.5 70-71 32.306809766954515 35.0 33.0 38.5 17.0 40.0 72-73 31.94678117780912 35.0 32.5 37.5 13.5 39.5 74-75 31.550161112395273 35.0 32.0 37.0 9.5 39.0 76-77 28.871722560026132 32.0 28.0 34.5 6.0 36.5 78-79 30.432168774922935 34.5 31.0 35.5 7.0 37.0 80-81 30.617643191409552 35.0 31.5 35.5 3.5 37.0 82-83 30.444248225203015 35.0 32.0 35.0 2.0 37.0 84-85 30.248920034824636 35.0 31.0 35.0 2.0 36.0 86-87 30.04225221010496 35.0 31.0 35.0 2.0 36.0 88-89 29.773362335409985 34.0 31.0 35.0 2.0 36.0 90-91 29.578104562498183 34.0 31.0 35.0 2.0 35.0 92-93 29.416585406871086 34.0 31.0 35.0 2.0 35.0 94-95 29.307366878115154 34.0 31.0 35.0 2.0 35.0 96-97 29.098479778595028 34.0 31.0 35.0 2.0 35.0 98-99 28.889805488617633 34.0 31.0 35.0 2.0 35.0 100-101 27.76980305255392 33.0 27.5 34.5 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 67916.0 3 21906.0 4 11529.0 5 8364.0 6 7095.0 7 7200.0 8 7544.0 9 8059.0 10 8756.0 11 9335.0 12 10016.0 13 10709.0 14 11432.0 15 12306.0 16 13384.0 17 13918.0 18 13247.0 19 11745.0 20 11370.0 21 11266.0 22 11807.0 23 13302.0 24 15674.0 25 18627.0 26 22531.0 27 26708.0 28 32285.0 29 38627.0 30 47278.0 31 58656.0 32 74185.0 33 96896.0 34 138247.0 35 207768.0 36 362539.0 37 683781.0 38 684470.0 39 79430.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.12497825304926 19.972018345762308 13.75478172992748 26.148221671260963 2 14.899882418158125 21.444775635990425 37.378360927117946 26.276981018733508 3 17.214978116567906 25.29816111341629 29.418032557120654 28.068828212895152 4 13.072963437823883 17.242826764391893 35.204404556127116 34.47980524165711 5 14.080375131479805 37.44171018753459 34.33856183678195 14.139352844203657 6 33.45693840750849 35.82315200552001 16.845516841883434 13.874392745088066 7 28.52969713914768 32.002679670079466 21.408363172806887 18.05926001796597 8 26.462088066471317 35.02533644669658 19.965583679480453 18.546991807351652 9 26.698531579552014 15.484056931916172 19.32961187691788 38.48779961161393 10-11 25.43852603876553 25.391080860362315 28.039165726475517 21.131227374396637 12-13 25.98968372786537 22.888071751951323 27.78403616318278 23.338208357000525 14-15 23.20607326929612 24.509547100157867 24.90589242495444 27.378487205591572 16-17 23.454604783266454 27.54598070249987 25.76671990942272 23.23269460481095 18-19 23.518239862720254 26.883309967193973 27.047833195005094 22.550616975080672 20-21 24.00614276885514 26.04870338163716 26.855685763738702 23.089468085769 22-23 23.909433087391204 25.80913056905801 26.639295548386933 23.64214079516386 24-25 23.769147521668156 26.047653939283315 26.55997314783656 23.62322539121197 26-27 23.50869920059436 26.247022104553047 26.586089964667526 23.658188730185067 28-29 23.638584952638084 26.457062830973687 26.43628262328235 23.468069593105884 30-31 23.947801346375442 26.12099174880856 26.254338394887768 23.676868509928234 32-33 23.707136711939462 26.187831231653995 26.070133035990523 24.034899020416017 34-35 24.030515346612088 26.257930086502483 26.162589094513205 23.54896547237222 36-37 24.137065924656202 25.981151333142893 26.281309838565313 23.600472903635588 38-39 23.91143593498478 26.07027628561186 26.261787572476358 23.756500206927004 40-41 24.03375852151268 26.053297118832898 26.238533665695613 23.67441069395881 42-43 23.98633333079555 26.044552677168024 25.956566486414655 24.01254750562177 44-45 23.81650339254205 26.022339180841335 26.198273120484643 23.962884306131976 46-47 24.025647307648654 26.03096529329203 25.974819850121943 23.968567548937372 48-49 23.76104150481111 26.185076816862857 26.010696741663825 24.043184936662207 50-51 23.845348902393702 26.19475720750742 26.055285528511323 23.904608361587552 52-53 24.163700692023262 25.97430774748738 25.9862633460208 23.87572821446856 54-55 23.581154814617054 25.919509334333636 26.23465350491913 24.264682346130176 56-57 23.669464370158543 25.98189114651166 26.108825111607935 24.23981937172186 58-59 23.690253297294678 25.843124565234692 26.16402894628464 24.302593191185988 60-61 23.629222896688333 25.976219619177538 26.30796766300088 24.08658982113325 62-63 23.66900706862189 25.99017726844583 26.24378378499982 24.09703187793246 64-65 23.41190229711278 25.77734845368034 26.23157157947555 24.57917766973134 66-67 23.49170785990111 25.916664156467466 26.108270258086563 24.48335772554486 68-69 23.59292642015998 25.799231087469426 26.126598799720963 24.48124369264963 70-71 23.464321546269755 25.66402324113806 26.10228766967944 24.769367542912743 72-73 23.408579167351743 25.90640278991684 25.982710130755716 24.7023079119757 74-75 23.45823465226334 26.02985828864743 25.92484461246786 24.587062446621367 76-77 23.470346189851732 25.643697216134708 26.095574872613014 24.790381721400546 78-79 23.35846377614628 25.766016761324284 26.139112065383017 24.736407397146422 80-81 23.567618027318883 25.856922292254364 25.93541846214681 24.640041218279947 82-83 23.42402258933116 25.84236236832856 26.044117104970095 24.689497937370195 84-85 23.286522124770034 25.858253574022616 26.066511752539917 24.788712548667434 86-87 23.37157255404777 25.921548368153292 25.91098759819352 24.795891479605423 88-89 23.142836074035838 25.74358129063881 26.04217110485519 25.07141153047016 90-91 23.034373765310153 25.728416038140672 26.081803033686633 25.15540716286254 92-93 23.20327521968317 25.557560071428618 26.15318517226027 25.08597953662794 94-95 22.978042323464777 25.475991902133476 26.25496167355908 25.291004100842663 96-97 22.9786049277034 25.266977687128367 26.30095546994735 25.45346191522088 98-99 22.799394162953142 25.312486374895066 26.207919620358727 25.680199841793065 100-101 22.739967396829584 25.33953561763146 26.235984391171606 25.684512594367355 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 93.0 1 79.0 2 95.5 3 119.5 4 111.5 5 133.0 6 208.5 7 435.5 8 654.5 9 689.0 10 579.5 11 477.0 12 491.0 13 522.0 14 576.5 15 615.0 16 640.5 17 748.0 18 845.0 19 914.5 20 1051.5 21 1223.0 22 1447.0 23 1723.0 24 2070.5 25 2636.0 26 3521.5 27 4828.0 28 6758.0 29 9615.0 30 13482.0 31 18828.0 32 26375.5 33 31807.0 34 35500.5 35 41375.0 36 49260.0 37 57713.0 38 65407.0 39 72685.5 40 79831.5 41 87142.5 42 94217.5 43 101446.0 44 108156.0 45 114995.5 46 120080.0 47 123771.0 48 126835.5 49 127553.0 50 126763.5 51 125299.0 52 123796.5 53 121913.0 54 118914.0 55 112566.0 56 102904.0 57 91901.5 58 82837.5 59 72413.0 60 59095.0 61 48883.0 62 41089.5 63 31530.5 64 22478.5 65 16690.0 66 12650.5 67 9860.5 68 7560.0 69 5618.5 70 4212.0 71 3079.5 72 2179.0 73 1583.0 74 1219.0 75 895.0 76 631.0 77 406.0 78 225.0 79 142.5 80 83.0 81 48.5 82 35.5 83 25.5 84 19.5 85 12.0 86 8.0 87 6.0 88 4.5 89 3.0 90 2.5 91 2.5 92 1.5 93 0.0 94 0.5 95 0.5 96 0.5 97 0.5 98 0.5 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.1538457279608901 2 2.0761906607407571E-4 3 0.00965428657244452 4 0.005986349738469183 5 0.023564763999407594 6 0.0020415874830617448 7 0.0 8 0.0 9 0.0 10-11 0.045364765937185546 12-13 2.5952383259259464E-4 14-15 0.0044984130982716405 16-17 0.0 18-19 0.0014706350513580362 20-21 2.0761906607407571E-4 22-23 1.730158883950631E-5 24-25 3.633333656296325E-4 26-27 0.0025433335594074276 28-29 0.0048098416973827544 30-31 0.015450318833679135 32-33 0.010865397791209963 34-35 0.009688889750123534 36-37 0.003512222534419781 38-39 0.0 40-41 0.0030969844022716297 42-43 0.008650794419753156 44-45 0.006470794225975359 46-47 0.003183492346469161 48-49 0.008408572176000067 50-51 0.0025606351482469337 52-53 0.0016782541174321121 54-55 0.004135079732642008 56-57 0.007491587967506232 58-59 0.014464128269827273 60-61 0.007439683200987713 62-63 0.02039857324177794 64-65 0.039084289188444754 66-67 0.058513973455210345 68-69 0.04889429006044484 70-71 0.06662841862093881 72-73 0.032284764774518776 74-75 0.026315716624889098 76-77 0.21708303516928565 78-79 0.07986413408316112 80-81 0.06467333908207458 82-83 0.026177303914173045 84-85 0.04934413137027199 86-87 0.06439651366064249 88-89 0.28359034266834793 90-91 0.2894382796961011 92-93 0.04948254408098804 94-95 0.008927619841185256 96-97 0.01340873135061739 98-99 7.612699089382776E-4 100-101 1.730158883950631E-4 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 2889908.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 57.41133849461729 #Duplication Level Percentage of deduplicated Percentage of total 1 76.51961670234934 43.93093615976949 2 12.67581586937149 14.554711111438563 3 4.3954092462770555 7.5703898418114814 4 1.9903429832983703 4.570730189381165 5 1.1299440575910589 3.243580038517081 6 0.7246614712402332 2.496227101162824 7 0.49209849581119297 1.9776423320995884 8 0.34812987510342736 1.5989281679721368 9 0.27626165341282505 1.4274496167449708 >10 1.3722149660216347 13.578097644499218 >50 0.05674049073536596 2.187093764778378 >100 0.01659064697308938 1.6219006250884065 >500 0.001267899392159943 0.5184162754443322 >1k 9.056424228894602E-4 0.7238971312924976 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10-11 0.0 0.0 0.0 0.0 0.0 12-13 0.0 0.0 0.0 0.0 6.920635535802523E-5 14-15 0.0 0.0 0.0 0.0 6.920635535802523E-5 16-17 0.0 0.0 0.0 1.730158883950631E-5 6.920635535802523E-5 18-19 0.0 0.0 0.0 3.460317767901262E-5 6.920635535802523E-5 20-21 3.460317767901262E-5 0.0 0.0 3.460317767901262E-5 1.2111112187654416E-4 22-23 3.460317767901262E-5 0.0 0.0 3.460317767901262E-5 1.9031747723456942E-4 24-25 3.460317767901262E-5 0.0 0.0 3.2873018795061986E-4 2.0761906607407571E-4 26-27 3.460317767901262E-5 3.460317767901262E-5 0.0 9.688889750123534E-4 2.24920654913582E-4 28-29 3.460317767901262E-5 3.460317767901262E-5 0.0 0.003494920945580274 2.4222224375308832E-4 30-31 3.460317767901262E-5 3.460317767901262E-5 0.0 0.013062699573827264 2.4222224375308832E-4 32-33 3.460317767901262E-5 3.460317767901262E-5 0.0 0.03968984479782747 2.7682542143210093E-4 34-35 3.460317767901262E-5 3.460317767901262E-5 0.0 0.0756944511728401 3.1142859911111357E-4 36-37 3.460317767901262E-5 3.460317767901262E-5 0.0 0.13147477359140847 3.1142859911111357E-4 38-39 3.460317767901262E-5 3.460317767901262E-5 0.0 0.21947065442913755 3.460317767901262E-4 40-41 3.460317767901262E-5 3.460317767901262E-5 0.0 0.3173111393165457 3.460317767901262E-4 42-43 3.460317767901262E-5 3.460317767901262E-5 0.0 0.42454638694380586 3.806349544691388E-4 44-45 3.460317767901262E-5 3.460317767901262E-5 0.0 0.5552425890374365 3.806349544691388E-4 46-47 3.460317767901262E-5 5.190476651851893E-5 0.0 0.711320221958623 3.806349544691388E-4 48-49 5.190476651851893E-5 6.920635535802523E-5 0.0 0.8687300772204514 3.806349544691388E-4 50-51 6.920635535802523E-5 8.650794419753154E-5 0.0 1.0313823139006502 4.1523813214815143E-4 52-53 6.920635535802523E-5 1.0380953303703786E-4 0.0 1.1998997891974414 4.844444875061767E-4 54-55 6.920635535802523E-5 1.0380953303703786E-4 0.0 1.3967572670133444 5.190476651851893E-4 56-57 6.920635535802523E-5 1.0380953303703786E-4 0.0 1.6236676046434697 5.53650842864202E-4 58-59 6.920635535802523E-5 1.0380953303703786E-4 0.0 1.8584155620178913 5.882540205432146E-4 60-61 6.920635535802523E-5 1.0380953303703786E-4 0.0 2.107800663550535 6.228571982222271E-4 62-63 6.920635535802523E-5 1.0380953303703786E-4 0.0 2.363570051364957 6.574603759012397E-4 64-65 6.920635535802523E-5 1.0380953303703786E-4 0.0 2.6518491246088107 6.574603759012397E-4 66-67 6.920635535802523E-5 1.0380953303703786E-4 0.0 2.984143439860369 6.747619647407461E-4 68-69 6.920635535802523E-5 1.0380953303703786E-4 0.0 3.343030297158249 7.26666731259265E-4 70-71 6.920635535802523E-5 1.0380953303703786E-4 0.0 3.716710012913906 7.439683200987713E-4 72-73 6.920635535802523E-5 1.0380953303703786E-4 0.0 4.110615286022946 8.477778531358091E-4 74-75 6.920635535802523E-5 1.0380953303703786E-4 0.0 4.530040402670258 8.823810308148218E-4 76-77 6.920635535802523E-5 1.0380953303703786E-4 0.0 4.995556951986015 8.996826196543281E-4 78-79 6.920635535802523E-5 1.0380953303703786E-4 0.0 5.520867792331105 9.342857973333407E-4 80-81 6.920635535802523E-5 1.0380953303703786E-4 0.0 6.054500696907999 9.51587386172847E-4 82-83 6.920635535802523E-5 1.0380953303703786E-4 0.0 6.610158524077583 0.001003492152691366 84-85 6.920635535802523E-5 1.2111112187654416E-4 0.0 7.195782703117192 0.001003492152691366 86-87 6.920635535802523E-5 1.3841271071605047E-4 0.0 7.8331905375534445 0.0010380953303703786 88-89 6.920635535802523E-5 1.3841271071605047E-4 0.0 8.51636107447019 0.0010726985080493912 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 2375 0.0 47.029026 1 GTATCAA 4380 0.0 42.863216 1 TCAACGC 5460 0.0 33.98533 4 CAACGCA 5555 0.0 33.428417 5 ATCAACG 5675 0.0 32.61415 3 TATCAAC 5745 0.0 32.051548 2 AACGCAG 5955 0.0 31.100035 6 GTACATG 7795 0.0 26.58472 1 ACGCAGA 7000 0.0 25.91408 7 TACATGG 7955 0.0 25.35456 2 CGCAGAG 7405 0.0 24.047876 8 ACATGGG 8315 0.0 23.91438 3 CATGGGG 7275 0.0 21.788172 4 GCAGAGT 8505 0.0 19.87713 9 AGAGTAC 7235 0.0 19.592228 10-11 ATGGGGG 4355 0.0 16.903112 5 CAGAGTA 7845 0.0 16.827898 10-11 GTATATG 765 0.0 16.77506 1 GAGTACT 3690 0.0 16.394606 12-13 TTAATAC 2440 0.0 15.948922 3 >>END_MODULE