##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921707_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1989763 Sequences flagged as poor quality 0 Sequence length 101 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.710995731652464 31.0 31.0 34.0 27.0 34.0 2 30.77684025685471 33.0 31.0 34.0 27.0 34.0 3 30.83746808036937 33.0 31.0 34.0 27.0 34.0 4 34.303504487720396 37.0 35.0 37.0 30.0 37.0 5 34.30329340730529 37.0 35.0 37.0 30.0 37.0 6 34.3433901424441 37.0 35.0 37.0 30.0 37.0 7 34.258189040604336 37.0 35.0 37.0 30.0 37.0 8 34.23361023398264 37.0 35.0 37.0 30.0 37.0 9 35.82621699167187 39.0 37.0 39.0 30.0 39.0 10-11 35.73256387821062 39.0 37.0 39.0 30.0 39.0 12-13 35.63021776965397 39.0 37.0 39.0 30.0 39.0 14-15 36.81441558617785 40.0 37.0 41.0 30.0 41.0 16-17 36.75020417004437 40.0 37.0 41.0 30.0 41.0 18-19 36.71721757817389 40.0 37.0 41.0 30.0 41.0 20-21 36.637678708469295 40.0 37.0 41.0 30.0 41.0 22-23 36.53308559863662 40.0 37.0 41.0 29.5 41.0 24-25 36.41970877938729 40.0 37.0 41.0 29.0 41.0 26-27 36.27112022889158 40.0 36.5 41.0 28.5 41.0 28-29 36.13247683266801 40.0 36.0 41.0 28.0 41.0 30-31 35.97544556814053 40.0 36.0 41.0 27.0 41.0 32-33 35.7840891101101 40.0 36.0 41.0 27.0 41.0 34-35 35.606773017691054 39.5 35.0 41.0 26.0 41.0 36-37 35.565011762707414 39.5 35.0 41.0 26.5 41.0 38-39 35.73232415116775 40.0 35.5 41.0 26.5 41.0 40-41 35.7784947252512 40.0 36.0 41.0 27.0 41.0 42-43 35.59679368849456 40.0 35.0 41.0 26.0 41.0 44-45 35.45410433302861 40.0 35.0 41.0 25.0 41.0 46-47 35.27233796185777 40.0 35.0 41.0 24.0 41.0 48-49 35.08815195578569 39.5 35.0 41.0 24.0 41.0 50-51 33.356238908854976 37.0 32.5 39.5 20.5 40.0 52-53 33.4720728046506 37.5 33.5 39.5 21.0 40.0 54-55 34.37989122322608 39.0 34.0 40.5 22.0 41.0 56-57 34.37927406429811 39.0 34.0 41.0 22.0 41.0 58-59 34.17501154660128 38.0 34.0 41.0 21.5 41.0 60-61 33.90527565343209 38.0 34.0 40.0 20.0 41.0 62-63 33.60128492689833 37.0 34.0 40.0 19.5 41.0 64-65 33.29001469019175 37.0 34.0 40.0 18.0 41.0 66-67 32.92441009306134 36.0 33.0 39.0 15.5 41.0 68-69 32.54235956744597 35.5 33.0 39.0 12.0 41.0 70-71 32.110230715919435 35.0 33.0 38.5 7.5 40.5 72-73 31.72569044655067 35.0 32.5 37.0 4.0 40.0 74-75 31.30575500700335 35.0 32.0 37.0 2.0 39.0 76-77 30.908591374952696 35.0 32.0 36.5 2.0 39.0 78-79 30.540525429410437 35.0 31.5 36.0 2.0 38.0 80-81 30.20330989168057 35.0 31.0 35.5 2.0 37.0 82-83 29.877336396344692 35.0 31.0 35.0 2.0 37.0 84-85 29.59625292057396 35.0 31.0 35.0 2.0 36.0 86-87 29.338249329191466 35.0 31.0 35.0 2.0 36.0 88-89 29.083097584988764 35.0 30.5 35.0 2.0 36.0 90-91 28.814696775445114 35.0 30.0 35.0 2.0 35.0 92-93 28.584878450348107 34.0 30.0 35.0 2.0 35.0 94-95 28.31269553208096 34.0 29.5 35.0 2.0 35.0 96-97 28.024231529081604 34.0 29.0 35.0 2.0 35.0 98-99 27.70057388744288 34.0 29.0 35.0 2.0 35.0 100-101 26.577016207457874 33.0 26.0 35.0 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 55459.0 3 10313.0 4 7210.0 5 5772.0 6 5401.0 7 5556.0 8 5878.0 9 6364.0 10 6926.0 11 7320.0 12 7425.0 13 7616.0 14 8281.0 15 9190.0 16 9470.0 17 9903.0 18 9377.0 19 8821.0 20 9039.0 21 9526.0 22 10481.0 23 11667.0 24 13733.0 25 16339.0 26 19202.0 27 22409.0 28 25797.0 29 30324.0 30 36089.0 31 43887.0 32 54027.0 33 69230.0 34 96412.0 35 142449.0 36 240907.0 37 433265.0 38 443584.0 39 75105.0 40 9.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.32717479084053 17.79990083844813 12.473235935100474 25.399688435610862 2 16.931360098577912 19.665136864870302 37.81599627818083 25.58750675837095 3 19.572387446425214 22.74603664761897 29.28801986780946 28.393556038146357 4 14.054938677057988 15.20293955820122 35.1184866063211 35.623635158419695 5 14.887753321333935 36.29551511164822 33.973686817710224 14.843044749307621 6 34.76299761052455 34.01876195617318 16.36328269897133 14.854957734330942 7 29.401501987688345 31.1135427698559 20.71000861021655 18.774946632239203 8 26.74809453460802 33.82029537415383 20.079883020535245 19.351727070702907 9 26.751405401466087 14.943871896745401 19.384412797257802 38.92030990453071 10-11 25.981253779175994 24.572020099310336 27.753589934461615 21.69313618705206 12-13 26.30484548457862 22.336999249993465 27.201686408795787 24.15646885663213 14-15 23.613932171212987 24.0864541520195 24.43461765865195 27.864996018115562 16-17 23.827927648495674 26.877846888725454 25.55145626480156 23.742769197977314 18-19 23.826782845757783 26.201338780401013 26.825266941834723 23.14661143200648 20-21 24.24959949652428 25.62561231665687 26.60763125631167 23.51715693050718 22-23 24.29484933206572 25.34937655948112 26.29993418945694 24.05583991899622 24-25 24.132908745017755 25.525121363616254 26.29822368712118 24.043746204244812 26-27 23.825451401455744 25.661745485985442 26.379865886516267 24.132937226042547 28-29 23.992192218002685 25.871030861949677 26.284716646222385 23.852060273825256 30-31 24.228426126766635 25.642411727053332 26.02634209132853 24.102820054851502 32-33 23.89348106018341 25.754868522500303 25.921156724557175 24.43049369275911 34-35 24.362515395098345 25.72874320460799 25.92872556354039 23.980015836753278 36-37 24.397242570240554 25.541707092569098 25.971961825383723 24.089088511806626 38-39 24.155402985839764 25.533681980347207 26.10226258693873 24.2086524468743 40-41 24.35704684696955 25.442085654715967 26.163308907249146 24.037558591065338 42-43 24.253881624036786 25.408992688242677 25.898819222599673 24.43830646512086 44-45 24.043367041823757 25.52848451793988 26.04301301076723 24.38513542946913 46-47 24.235941905194547 25.467746988036755 25.944055697523442 24.35225540924525 48-49 23.9812836278333 25.523697037539772 25.922779854716428 24.5722394799105 50-51 23.99423554346975 25.658227558040537 26.030177529245957 24.31735936924376 52-53 24.266342779320098 25.431964518117677 25.958088386392298 24.343604316169923 54-55 23.762650745005804 25.29610109012342 26.231985515384864 24.70926264948591 56-57 23.73613876321278 25.50240923745003 26.13908051592484 24.622371483412348 58-59 23.891583682145356 25.25567795457636 26.16606474555611 24.686673617722168 60-61 23.719789583019555 25.260439622990315 26.365264776715303 24.654506017274823 62-63 23.828476570035047 25.26296730366409 26.35482618345989 24.553729942840967 64-65 23.713652560405936 25.089031868145707 26.20823207967666 24.989083491771698 66-67 23.661865784301504 25.159620210291994 26.129844163333242 25.048669842073256 68-69 23.80083417603713 25.084530577054014 26.130272270546197 24.98436297636266 70-71 23.671961865704112 24.89550937041752 26.178201089321107 25.254327674557263 72-73 23.700032433717368 24.9673396495144 26.1373205317518 25.19530738501643 74-75 23.693842965529573 25.143041324728106 26.1071255001599 25.055990209582426 76-77 23.744368005487086 24.778635610773346 26.29201617723856 25.184980206501013 78-79 23.770494486827847 24.873053365310398 26.163032142688948 25.19342000517281 80-81 23.842342124511127 24.926202868063825 26.10088697604036 25.130568031384687 82-83 23.70591231047526 24.855792698131086 26.221499191754027 25.216795799639623 84-85 23.721701952756664 24.86286679668926 26.25485066206752 25.160580588486553 86-87 23.786864255102294 24.962157404540807 26.080620535436516 25.17035780492038 88-89 23.70794415887562 24.64191248017342 26.16141513618598 25.488728224764984 90-91 23.741796791163658 24.640635721605282 26.217672077199083 25.39989541003197 92-93 23.867880708959323 24.43012422203795 26.32365639392361 25.37833867507912 94-95 23.724215342087145 24.283279145741236 26.39232555579542 25.600179956376195 96-97 23.85522749842174 24.074193501254292 26.402306952447695 25.66827204787627 98-99 23.829707054580336 24.050901074054277 26.283547507719497 25.835844363645887 100-101 24.116934285239246 23.876883700542624 26.351503181696806 25.654678832521327 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 81.0 1 64.0 2 77.5 3 118.0 4 116.5 5 140.0 6 204.5 7 362.5 8 567.0 9 642.0 10 598.5 11 548.0 12 545.0 13 607.0 14 694.0 15 774.5 16 845.5 17 904.5 18 992.5 19 1105.0 20 1214.5 21 1322.5 22 1415.5 23 1537.5 24 1707.5 25 1927.5 26 2241.5 27 2748.5 28 3485.0 29 4598.5 30 6537.0 31 9361.5 32 13366.0 33 17019.5 34 20387.0 35 24647.0 36 29657.0 37 34801.0 38 39938.0 39 44951.0 40 49318.5 41 53720.0 42 58665.0 43 64181.0 44 69331.0 45 75313.5 46 79619.0 47 82363.5 48 86229.5 49 88229.5 50 88116.5 51 87930.0 52 87945.5 53 87940.0 54 86978.0 55 82881.5 56 76352.5 57 68822.5 58 62554.0 59 55908.5 60 46717.0 61 38685.5 62 32306.5 63 25338.0 64 18623.0 65 13924.5 66 10880.0 67 8670.0 68 6837.5 69 5411.5 70 4273.5 71 3259.5 72 2371.5 73 1758.0 74 1419.5 75 1152.0 76 836.5 77 567.0 78 389.0 79 254.5 80 158.5 81 110.5 82 91.5 83 80.0 84 73.5 85 65.5 86 47.0 87 38.5 88 33.5 89 23.0 90 30.0 91 33.0 92 22.0 93 14.0 94 9.0 95 10.5 96 11.0 97 8.0 98 7.0 99 6.0 100 4.5 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.05473013620215071 2 0.0747827756370985 3 0.07141554044376139 4 0.07221965631082697 5 0.06684213144982594 6 0.010302734546777681 7 0.013368426289965188 8 0.01779106355882585 9 0.005930354519608616 10-11 0.012162252489366823 12-13 0.022464987036144506 14-15 0.03794421747715683 16-17 0.026636338096547175 18-19 0.009599133163095302 20-21 0.019700838743106592 22-23 0.036185214017950884 24-25 0.035129811942427314 26-27 0.020253668401714175 28-29 0.010528892134389874 30-31 0.010528892134389874 32-33 0.007287300045281775 34-35 0.0043975086480148645 36-37 5.779582794533821E-4 38-39 0.0035933927809492887 40-41 9.297589712945713E-4 42-43 0.23482696180399373 44-45 0.20411978713042708 46-47 0.2101255275125731 48-49 0.21789027135392505 50-51 0.20839165267421295 52-53 0.21605588203218173 54-55 0.21148247303824627 56-57 0.21510099444004135 58-59 0.22379549725268788 60-61 0.22927353659707214 62-63 0.21359327718929338 64-65 0.2129901902889942 66-67 0.2106029713086433 68-69 0.20560237576032922 70-71 0.1979632750232063 72-73 0.20982398406242353 74-75 0.20846703853675033 76-77 0.2015315391833098 78-79 0.22020210447173857 80-81 0.23073099660612847 82-83 0.23118331178135285 84-85 0.22449909863637027 86-87 0.2460845839429118 88-89 0.23814393975563922 90-91 0.24470250979639285 92-93 0.23967678562723302 94-95 0.24311940668310747 96-97 0.25028106362416025 98-99 0.24394865117101888 100-101 0.2499292629323191 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 1989763.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 62.78441111725277 #Duplication Level Percentage of deduplicated Percentage of total 1 79.616369602853 49.9866688080867 2 11.429816396375509 14.352285832495133 3 3.748760915410708 7.060912394803041 4 1.683402858492887 4.227658285743037 5 0.9121314846948361 2.863381906403537 6 0.5812735695869077 2.1896951258722472 7 0.3877607934718521 1.704173315074223 8 0.296629646769609 1.4898974153878883 9 0.2224242961659255 1.256830060765235 >10 1.075495635737207 11.33039339039822 >50 0.03404960813442066 1.4423384259909635 >100 0.01044035602090776 1.2927012786585508 >500 9.632241908267076E-4 0.400448361437873 >1k 4.8161209541334153E-4 0.4026153988833504 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 5.025724169159845E-5 5 0.0 5.025724169159845E-5 0.0 0.0 5.025724169159845E-5 6 0.0 5.025724169159845E-5 0.0 0.0 5.025724169159845E-5 7 0.0 5.025724169159845E-5 0.0 0.0 5.025724169159845E-5 8 0.0 5.025724169159845E-5 0.0 0.0 5.025724169159845E-5 9 0.0 5.025724169159845E-5 0.0 0.0 1.5077172507479533E-4 10-11 0.0 5.025724169159845E-5 0.0 0.0 1.5077172507479533E-4 12-13 0.0 5.025724169159845E-5 0.0 0.0 2.7641482930379144E-4 14-15 0.0 5.025724169159845E-5 0.0 0.0 4.020579335327876E-4 16-17 0.0 5.025724169159845E-5 0.0 0.0 5.528296586075829E-4 18-19 0.0 1.5077172507479533E-4 0.0 0.0 6.533441419907798E-4 20-21 0.0 1.5077172507479533E-4 0.0 0.0 7.287300045281774E-4 22-23 0.0 1.5077172507479533E-4 0.0 1.256431042289961E-4 8.795017296029729E-4 24-25 0.0 1.5077172507479533E-4 0.0 3.7692931268698836E-4 9.548875921403704E-4 26-27 0.0 1.5077172507479533E-4 0.0 0.0012815596631357605 0.0011056593172151657 28-29 0.0 1.5077172507479533E-4 0.0 0.006508312799061999 0.0011810451797525635 30-31 2.5128620845799223E-5 1.5077172507479533E-4 0.0 0.02839534155575312 0.0012313024214441618 32-33 5.025724169159845E-5 1.5077172507479533E-4 0.0 0.08005978601471633 0.0013066882839815597 34-35 5.025724169159845E-5 2.010289667663938E-4 0.0 0.16682891379526105 0.001356945525673158 36-37 5.025724169159845E-5 2.7641482930379144E-4 0.0 0.2963418256345102 0.001356945525673158 38-39 5.025724169159845E-5 3.0154345014959065E-4 0.0 0.4868167716456684 0.0013820741465189572 40-41 5.025724169159845E-5 3.0154345014959065E-4 0.0 0.6978218008878444 0.0014072027673647566 42-43 5.025724169159845E-5 3.0154345014959065E-4 0.0 0.9231250153912802 0.0014825886299021543 44-45 5.025724169159845E-5 3.0154345014959065E-4 0.0 1.208259476128564 0.0015077172507479534 46-47 5.025724169159845E-5 3.0154345014959065E-4 0.0 1.5437516930408295 0.0015077172507479534 48-49 5.025724169159845E-5 3.0154345014959065E-4 0.0 1.8726350826706497 0.0017087462175143472 50-51 5.025724169159845E-5 3.0154345014959065E-4 0.0 2.1996086971161892 0.001809260700897544 52-53 5.025724169159845E-5 3.0154345014959065E-4 0.0 2.5308793057263603 0.0019600324259723394 54-55 5.025724169159845E-5 3.0154345014959065E-4 0.0 2.9233632347168985 0.0020605469093555365 56-57 5.025724169159845E-5 3.0154345014959065E-4 0.0 3.385227285862688 0.0020856755302013355 58-59 5.025724169159845E-5 3.5180069184118914E-4 0.0 3.8535493925658484 0.0021359327718929342 60-61 5.025724169159845E-5 3.5180069184118914E-4 0.0 4.327977754134538 0.002161061392738733 62-63 5.025724169159845E-5 3.5180069184118914E-4 0.0 4.800345568793871 0.002161061392738733 64-65 5.025724169159845E-5 3.5180069184118914E-4 0.0 5.330157410706702 0.002161061392738733 66-67 5.025724169159845E-5 3.5180069184118914E-4 0.0 5.956639057013323 0.0022615758761219303 68-69 5.025724169159845E-5 3.5180069184118914E-4 0.0 6.619230531475356 0.002362090359505127 70-71 5.025724169159845E-5 3.5180069184118914E-4 0.0 7.277952198327137 0.002462604842888324 72-73 5.025724169159845E-5 3.5180069184118914E-4 0.0 7.961199399124418 0.0027892769138837138 74-75 5.025724169159845E-5 3.5180069184118914E-4 0.0 8.687466798809709 0.0029149200181127098 76-77 5.025724169159845E-5 3.5180069184118914E-4 0.0 9.502161815251362 0.0029149200181127098 78-79 5.025724169159845E-5 3.5180069184118914E-4 0.0 10.380583014157967 0.0029149200181127098 80-81 5.025724169159845E-5 3.5180069184118914E-4 0.0 11.26792487346483 0.0029651772598043085 82-83 5.025724169159845E-5 4.020579335327876E-4 0.0 12.166574612152303 0.003040563122341706 84-85 5.025724169159845E-5 4.020579335327876E-4 0.0 13.11729085323227 0.003065691743187505 86-87 5.025724169159845E-5 4.020579335327876E-4 0.0 14.13469845403699 0.003065691743187505 88-89 5.025724169159845E-5 4.020579335327876E-4 0.0 15.232115583614732 0.0030908203640333046 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 1670 0.0 44.618122 1 GTATCAA 2840 0.0 39.939964 1 TCAACGC 3310 0.0 33.266716 4 TATCAAC 3520 0.0 31.8214 2 CAACGCA 3475 0.0 31.686348 5 ATCAACG 3595 0.0 30.761461 3 GTACATG 4760 0.0 29.91179 1 AACGCAG 3755 0.0 29.30737 6 TACATGG 5030 0.0 27.552738 2 ACATGGG 5120 0.0 26.234116 3 ACGCAGA 4395 0.0 24.504295 7 GTGGTAT 1000 0.0 24.204622 1 CATGGGG 4375 0.0 24.083792 4 CGCAGAG 4575 0.0 23.437666 8 TAAGGTG 1010 0.0 20.67618 5 TAAGGTA 510 0.0 20.473988 4 GCAGAGT 5020 0.0 20.22739 9 TAAGGCG 575 0.0 19.809904 5 ATGGGGG 2445 0.0 19.605661 5 GTATATA 425 0.0 18.984015 1 >>END_MODULE