##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921706_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 5943281 Sequences flagged as poor quality 0 Sequence length 101 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.359119819507104 31.0 31.0 34.0 26.0 34.0 2 30.41895781135033 31.0 31.0 34.0 26.0 34.0 3 30.480311632581397 33.0 31.0 34.0 26.0 34.0 4 33.926538388476 37.0 35.0 37.0 30.0 37.0 5 33.91998140421091 37.0 35.0 37.0 30.0 37.0 6 33.9596312205329 37.0 35.0 37.0 30.0 37.0 7 33.87688164163868 37.0 35.0 37.0 29.0 37.0 8 33.84614659815008 37.0 35.0 37.0 29.0 37.0 9 35.40435964579161 39.0 37.0 39.0 30.0 39.0 10-11 35.29919567996196 39.0 35.5 39.0 29.0 39.0 12-13 35.20057456479006 39.0 35.0 39.0 29.0 39.0 14-15 36.34335344399835 40.0 37.0 41.0 28.0 41.0 16-17 36.285456551692576 40.0 37.0 41.0 28.0 41.0 18-19 36.24806979511822 40.0 37.0 41.0 27.0 41.0 20-21 36.174117629639255 40.0 37.0 41.0 27.0 41.0 22-23 36.07723461165642 40.0 36.5 41.0 27.0 41.0 24-25 35.96970149989543 40.0 36.0 41.0 27.0 41.0 26-27 35.828211975842976 40.0 36.0 41.0 27.0 41.0 28-29 35.691964505800755 40.0 36.0 41.0 26.5 41.0 30-31 35.552364846959115 40.0 36.0 41.0 25.5 41.0 32-33 35.38216029159651 39.5 35.5 41.0 25.0 41.0 34-35 35.21573462536939 39.0 35.0 41.0 25.0 41.0 36-37 35.19015372148818 39.0 35.0 41.0 24.5 41.0 38-39 35.37106843846017 40.0 35.0 41.0 25.0 41.0 40-41 35.43929472626316 40.0 35.0 41.0 25.0 41.0 42-43 35.28822244817299 40.0 35.0 41.0 24.0 41.0 44-45 35.17541371508432 40.0 35.0 41.0 24.0 41.0 46-47 35.031272709468055 40.0 35.0 41.0 23.0 41.0 48-49 34.87356890915977 39.5 35.0 41.0 22.5 41.0 50-51 33.19404618425412 37.0 32.5 39.5 18.5 40.0 52-53 33.31153852560564 37.5 33.5 39.5 19.0 40.0 54-55 34.22803607973441 39.0 34.0 40.5 20.0 41.0 56-57 34.25693737179851 39.0 34.0 41.0 20.0 41.0 58-59 34.07597032682789 38.5 34.0 41.0 19.0 41.0 60-61 33.8314903838469 38.0 34.0 40.5 18.0 41.0 62-63 33.54709099233235 37.5 34.0 40.0 15.5 41.0 64-65 33.263793433290466 37.0 33.5 40.0 13.0 41.0 66-67 32.92814886255589 36.5 33.0 39.5 12.0 41.0 68-69 32.57191128940395 36.0 33.0 39.0 8.0 41.0 70-71 32.16278171939035 35.5 32.5 39.0 7.0 40.5 72-73 31.803458813406266 35.0 32.0 37.5 2.0 40.0 74-75 31.403141884087255 35.0 32.0 37.0 2.0 39.0 76-77 31.01961273579358 35.0 32.0 37.0 2.0 39.0 78-79 30.676186268157267 35.0 31.5 36.0 2.0 38.5 80-81 30.36020920094473 35.0 31.0 36.0 2.0 37.0 82-83 30.050722067491 35.0 31.0 35.0 2.0 37.0 84-85 29.790324906394297 35.0 31.0 35.0 2.0 36.5 86-87 29.560442371814492 35.0 31.0 35.0 2.0 36.0 88-89 29.34803309821629 35.0 31.0 35.0 2.0 36.0 90-91 29.134410353473108 34.5 30.5 35.0 2.0 35.5 92-93 28.953663388959733 34.0 30.0 35.0 2.0 35.0 94-95 28.73653382702248 34.0 30.0 35.0 2.0 35.0 96-97 28.51404165476948 34.0 30.0 35.0 2.0 35.0 98-99 28.25777874207866 34.0 30.0 35.0 2.0 35.0 100-101 27.19903273966013 33.0 27.5 35.0 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 210324.0 3 35333.0 4 23758.0 5 18040.0 6 16688.0 7 16517.0 8 17935.0 9 18764.0 10 20831.0 11 22080.0 12 22037.0 13 22228.0 14 23489.0 15 24531.0 16 24594.0 17 25391.0 18 24744.0 19 23479.0 20 24145.0 21 25268.0 22 27391.0 23 31403.0 24 37147.0 25 43837.0 26 52441.0 27 61657.0 28 72957.0 29 86626.0 30 103946.0 31 125907.0 32 157845.0 33 204348.0 34 282234.0 35 414067.0 36 691589.0 37 1261972.0 38 1404840.0 39 242876.0 40 22.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.560058617999026 17.997981534151887 13.33626816135269 25.105691686496396 2 15.742728082631066 19.71243532345722 39.29550493292027 25.249331660991448 3 19.044107259906713 23.894978112302017 28.998072293132672 28.0628423346586 4 13.3799883418603 16.121014992259898 36.76750631987686 33.73149034600294 5 14.683161367151767 36.72541347732439 34.235533534036776 14.355891621487066 6 33.307699737594994 35.13305855464886 17.55626462082527 14.002977086930871 7 29.080317932406132 31.227352835606304 21.264459982556225 18.427869249431346 8 26.500670442505513 34.27502682443157 20.26202118221362 18.962281550849294 9 26.690000910328287 15.92071629543165 19.3612524232653 38.02803037097476 10-11 25.48581686850875 25.14170342297717 28.031522669602797 21.34095703891129 12-13 26.282814916202618 22.54568614863577 27.548655276021982 23.622843659139633 14-15 23.49438413880899 24.02735526240708 24.882817385326668 27.59544321345726 16-17 23.806604577384046 26.972173426432196 25.63746562964802 23.58375636653574 18-19 23.77081490213005 26.503298370313534 26.672741338859435 23.05314538869699 20-21 24.38265234298316 25.77083312472279 26.476123272042084 23.370391260251964 22-23 24.177229443612394 25.58176486489307 26.216381485996138 24.0246242054984 24-25 24.00595458605629 25.78957848135333 26.21353430383874 23.990932628751636 26-27 23.921776550518008 25.91752566389285 26.16346753467172 23.997230250917422 28-29 23.989666736866532 26.056167913590723 26.041283747154946 23.912881602387795 30-31 24.227030690924853 25.82873641728471 25.948777052895117 23.995455838895317 32-33 24.009294689149304 25.849958146470442 25.89184112368208 24.248906040698174 34-35 24.30040156858258 25.94170062149321 25.86052033124991 23.897377478674294 36-37 24.3671697283662 25.7420594034517 25.858746587825276 24.03202428035682 38-39 24.146246763544738 25.887687903702446 25.933800686938284 24.032264645814536 40-41 24.37243057494043 25.703193578820322 25.996116238253187 23.928259607986057 42-43 24.215084666966703 25.660664719283993 25.88389763644761 24.240352977301686 44-45 24.154680336912445 25.75068209345586 25.965470941596617 24.129166628035073 46-47 24.3349913558612 25.74512813639785 25.70629483804567 24.213585669695277 48-49 24.110032703471525 25.77113639400286 25.802883081401255 24.31594782112436 50-51 24.17961226057089 25.825896144108295 25.865226237808493 24.129265357512324 52-53 24.3381269414138 25.69882467148806 25.905369309179754 24.05767907791838 54-55 24.04987906773968 25.56483453568764 26.061418398478057 24.32386799809462 56-57 24.024851518641633 25.71299164785247 26.02183590792061 24.24032092558529 58-59 24.120051485658674 25.56032130989659 26.035614398449358 24.284012805995374 60-61 24.0696320411795 25.5753519219764 26.15220450542413 24.202811531419975 62-63 24.04705517405028 25.632965090475967 26.155105391974015 24.164874343499736 64-65 23.954504770830372 25.500630777668025 26.084135945863885 24.460728505637718 66-67 23.95102857046041 25.641183852159838 25.967607787543663 24.44017978983609 68-69 24.088773559436152 25.54395096486568 26.03457034623195 24.332705129466216 70-71 23.965714345434233 25.37358920055316 26.067408552146738 24.593287901865875 72-73 23.976874765511276 25.44563920308352 26.01073858246969 24.566747448935512 74-75 24.028841221222965 25.555041195362598 25.97560089530142 24.440516688113014 76-77 24.024461701638444 25.325915526956894 26.11884909035618 24.530773681048483 78-79 24.001062190852934 25.371490713206363 26.0988301147967 24.528616981144005 80-81 24.09673618894529 25.451642444230448 25.967280109116892 24.484341257707378 82-83 24.070105932517762 25.49401676196951 26.050363135537776 24.38551416997495 84-85 24.037825853910956 25.485569938004527 26.065927073334528 24.41067713474999 86-87 24.041180123621317 25.50102638325644 26.019332009792905 24.438461483329334 88-89 24.066239326868573 25.310739245801212 26.021897714827873 24.60112371250234 90-91 23.960689869981994 25.405746600558427 26.09026402092052 24.543299508539057 92-93 24.036597925757793 25.293655648475767 26.225289802436464 24.444456623329977 94-95 23.970274681952606 25.18416642994239 26.231748305134268 24.613810582970743 96-97 24.03278790542918 25.12795548564901 26.25466027636209 24.584596332559716 98-99 23.954245985250303 25.01752985387235 26.21009955675356 24.81812460412379 100-101 24.159353957497718 24.869479251008134 26.300936484371324 24.67023030712282 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 42.0 1 35.5 2 54.5 3 94.0 4 85.0 5 99.0 6 183.0 7 371.5 8 602.5 9 719.5 10 697.0 11 684.5 12 767.0 13 891.0 14 1073.5 15 1256.0 16 1435.0 17 1628.5 18 1757.5 19 1905.5 20 2103.5 21 2305.5 22 2517.5 23 2739.0 24 3105.0 25 3650.5 26 4453.0 27 5525.0 28 7050.5 29 9747.0 30 14252.5 31 21562.5 32 32781.5 33 45791.0 34 60107.5 35 77136.5 36 98364.5 37 119681.0 38 138998.0 39 156177.0 40 170219.0 41 184844.5 42 200013.5 43 214455.0 44 228140.5 45 243892.5 46 254652.0 47 260744.0 48 267152.5 49 269411.0 50 265435.5 51 260198.0 52 257743.0 53 252702.5 54 245511.0 55 233444.0 56 214626.5 57 192063.0 58 172874.0 59 152491.0 60 125551.5 61 102576.0 62 83940.5 63 64672.0 64 47757.0 65 35698.0 66 27171.5 67 21618.5 68 17019.0 69 13153.5 70 10205.0 71 7598.0 72 5481.0 73 4285.0 74 3441.5 75 2656.5 76 2029.0 77 1430.0 78 952.0 79 671.0 80 468.0 81 334.5 82 263.5 83 210.5 84 167.0 85 144.5 86 128.0 87 106.0 88 90.5 89 74.5 90 67.5 91 61.0 92 44.0 93 37.0 94 39.5 95 32.0 96 20.5 97 19.0 98 17.0 99 13.5 100 10.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.05259721019416715 2 0.07241791192440673 3 0.06898546442613095 4 0.06869942713460797 5 0.06457712499207087 6 0.009405579174196878 7 0.012787549503380373 8 0.015765702479825536 9 0.00622551752138255 10-11 0.012854852395503425 12-13 0.02186502707847736 14-15 0.03937219189198693 16-17 0.02639114657375278 18-19 0.00964955215814295 20-21 0.019980546099031833 22-23 0.035922918670680384 24-25 0.0332812801548505 26-27 0.020636749297231614 28-29 0.012190236335788262 30-31 0.01194626335184219 32-33 0.008959697513881641 34-35 0.005653442938336585 36-37 6.814417827459277E-4 38-39 0.0040970635579909475 40-41 0.0012451035042765099 42-43 0.21752294734171243 44-45 0.18804428059181452 46-47 0.19376502642227414 48-49 0.20112628024823326 50-51 0.19242738144132845 52-53 0.1998138738518337 54-55 0.1960953890620349 56-57 0.19875385330089557 58-59 0.20710782478566975 60-61 0.21138155843548367 62-63 0.19742462118146525 64-65 0.19709651958236535 66-67 0.19479980838866615 68-69 0.18995400015580619 70-71 0.18220575470013953 72-73 0.19336962193105123 74-75 0.1922170599034439 76-77 0.1862439282275228 78-79 0.20432316762407834 80-81 0.21469622587254414 82-83 0.21390541689009826 84-85 0.20803323955236172 86-87 0.2267855078701478 88-89 0.21919710678327342 90-91 0.22563294584254048 92-93 0.22148540511545728 94-95 0.22523754135131754 96-97 0.23181639905634613 98-99 0.2254142114431406 100-101 0.23158925179543083 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 5943281.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 54.55794382676271 #Duplication Level Percentage of deduplicated Percentage of total 1 74.84556870587933 40.83420333137473 2 13.37060342471924 14.58945261151507 3 4.8135207263735955 7.878473801953459 4 2.2224764541477664 4.850149821667864 5 1.2575840384906878 3.4305599664704167 6 0.8010513766021836 2.6222229604207725 7 0.5192588675184484 1.983078728793395 8 0.36447517546707014 1.5908012919505516 9 0.27070144340951163 1.3292022729023747 >10 1.417755382618532 13.724521816557184 >50 0.08168476704224766 3.042710249434237 >100 0.03349341169711039 3.0696277578973823 >500 0.001145267907092728 0.43788917629364305 >1k 6.809581270207717E-4 0.617106212768964 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 1.6825723030763647E-5 0.0 5 0.0 0.0 0.0 1.6825723030763647E-5 0.0 6 0.0 0.0 0.0 1.6825723030763647E-5 0.0 7 0.0 0.0 0.0 1.6825723030763647E-5 0.0 8 0.0 0.0 0.0 1.6825723030763647E-5 0.0 9 0.0 0.0 0.0 3.3651446061527294E-5 0.0 10-11 0.0 8.412861515381824E-6 0.0 3.3651446061527294E-5 0.0 12-13 0.0 1.6825723030763647E-5 0.0 1.0095433818458188E-4 3.3651446061527294E-5 14-15 0.0 1.6825723030763647E-5 0.0 1.0095433818458188E-4 7.571575363843641E-5 16-17 8.412861515381824E-6 1.6825723030763647E-5 0.0 1.2619292273072734E-4 1.1778006121534552E-4 18-19 1.6825723030763647E-5 1.6825723030763647E-5 0.0 1.8508295333840013E-4 1.1778006121534552E-4 20-21 1.6825723030763647E-5 2.523858454614547E-5 0.0 1.9349581485378196E-4 1.5984436879225462E-4 22-23 1.6825723030763647E-5 3.3651446061527294E-5 0.0 2.1032153788454557E-4 1.9349581485378196E-4 24-25 1.6825723030763647E-5 3.3651446061527294E-5 0.0 3.7016590667680025E-4 2.0190867636916377E-4 26-27 1.6825723030763647E-5 3.3651446061527294E-5 0.0 5.804874445613458E-4 2.1032153788454557E-4 28-29 1.6825723030763647E-5 3.3651446061527294E-5 0.0 0.0018340038103532375 2.2714726091530924E-4 30-31 1.6825723030763647E-5 3.3651446061527294E-5 0.0 0.007487446748689823 2.3556012243069105E-4 32-33 1.6825723030763647E-5 3.3651446061527294E-5 0.0 0.02311854344426925 2.523858454614547E-4 34-35 1.6825723030763647E-5 3.3651446061527294E-5 0.0 0.04418434867878534 2.6921156849221836E-4 36-37 1.6825723030763647E-5 3.3651446061527294E-5 0.0 0.08123459079252689 2.6921156849221836E-4 38-39 3.3651446061527294E-5 3.3651446061527294E-5 0.0 0.1426064155472373 3.1968873758450925E-4 40-41 6.730289212305459E-5 3.3651446061527294E-5 0.0 0.21238268895581414 3.365144606152729E-4 42-43 6.730289212305459E-5 3.3651446061527294E-5 0.0 0.287711450964543 3.365144606152729E-4 44-45 6.730289212305459E-5 3.3651446061527294E-5 0.0 0.3818934356292425 3.365144606152729E-4 46-47 6.730289212305459E-5 3.3651446061527294E-5 0.0 0.4917654070201291 3.4492732213065475E-4 48-49 6.730289212305459E-5 3.3651446061527294E-5 0.0 0.6091921280518287 3.533401836460366E-4 50-51 6.730289212305459E-5 3.3651446061527294E-5 0.0 0.7325246778673262 3.533401836460366E-4 52-53 6.730289212305459E-5 3.3651446061527294E-5 0.0 0.8600047684099069 3.869916297075639E-4 54-55 6.730289212305459E-5 3.3651446061527294E-5 0.0 1.0083487555106347 4.0381735273832753E-4 56-57 6.730289212305459E-5 3.3651446061527294E-5 0.0 1.1792307986110702 4.0381735273832753E-4 58-59 6.730289212305459E-5 3.3651446061527294E-5 0.0 1.363270557121563 4.0381735273832753E-4 60-61 6.730289212305459E-5 3.3651446061527294E-5 0.0 1.5584994214475136 4.0381735273832753E-4 62-63 6.730289212305459E-5 3.3651446061527294E-5 0.0 1.761964477197023 4.374687987998548E-4 64-65 6.730289212305459E-5 3.3651446061527294E-5 0.0 1.9858980250134564 4.374687987998548E-4 66-67 6.730289212305459E-5 3.3651446061527294E-5 0.0 2.24431589218144 4.374687987998548E-4 68-69 6.730289212305459E-5 3.3651446061527294E-5 0.0 2.523328444339078 4.374687987998548E-4 70-71 6.730289212305459E-5 3.3651446061527294E-5 0.0 2.8194191053729414 4.4588166031523665E-4 72-73 6.730289212305459E-5 3.3651446061527294E-5 0.0 3.1285244631711002 5.300102754690549E-4 74-75 6.730289212305459E-5 3.3651446061527294E-5 0.0 3.457635605652837 5.552488600152004E-4 76-77 6.730289212305459E-5 3.3651446061527294E-5 0.0 3.821542343362194 5.552488600152004E-4 78-79 6.730289212305459E-5 3.3651446061527294E-5 0.0 4.229692319780943 5.552488600152004E-4 80-81 6.730289212305459E-5 3.3651446061527294E-5 0.0 4.655913122734733 5.72074583045964E-4 82-83 6.730289212305459E-5 3.3651446061527294E-5 0.0 5.098993300165347 6.309646136536367E-4 84-85 6.730289212305459E-5 3.3651446061527294E-5 0.0 5.5648302679950685 6.477903366844005E-4 86-87 7.571575363843641E-5 3.3651446061527294E-5 0.0 6.067271596278218 6.562031981997823E-4 88-89 8.412861515381823E-5 3.3651446061527294E-5 0.0 6.614452522100167 6.730289212305458E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 7710 0.0 42.41533 1 GGTATCA 4155 0.0 42.151527 1 TCAACGC 8400 0.0 37.295734 4 CAACGCA 8735 0.0 35.86146 5 ATCAACG 8950 0.0 34.843246 3 TATCAAC 9370 0.0 33.68697 2 AACGCAG 9755 0.0 32.338657 6 ACGCAGA 11590 0.0 26.36284 7 GTACATG 15695 0.0 25.825842 1 CGCAGAG 12245 0.0 24.643726 8 TACATGG 16390 0.0 23.892132 2 ACATGGG 16330 0.0 22.875195 3 CATGGGG 14055 0.0 19.689388 4 GCAGAGT 14455 0.0 19.530869 9 AGAGTAC 11685 0.0 18.293392 10-11 TAAGGCG 1335 0.0 16.353983 5 GAGTACA 11830 0.0 16.28918 1 CAGAGTA 13385 0.0 15.934538 10-11 AGTACAT 11710 0.0 15.605717 2 GTATTAA 3325 0.0 15.559399 1 >>END_MODULE