##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921705_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2413032 Sequences flagged as poor quality 0 Sequence length 101 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.526795334666097 33.0 31.0 34.0 30.0 34.0 2 31.65680852968382 34.0 31.0 34.0 30.0 34.0 3 31.729722191831687 34.0 31.0 34.0 29.0 34.0 4 35.20134710190333 37.0 35.0 37.0 33.0 37.0 5 34.96159396145596 37.0 35.0 37.0 32.0 37.0 6 34.948178888634715 37.0 35.0 37.0 32.0 37.0 7 34.84802356537335 37.0 35.0 37.0 32.0 37.0 8 34.794444499699964 37.0 35.0 37.0 32.0 37.0 9 36.39618745213491 39.0 37.0 39.0 32.0 39.0 10-11 36.29500396182065 39.0 37.0 39.0 32.0 39.0 12-13 36.21928532236622 39.0 37.0 39.0 32.0 39.0 14-15 37.474532662641856 40.0 38.0 41.0 32.0 41.0 16-17 37.44661964698355 40.0 38.0 41.0 32.0 41.0 18-19 37.4096155790723 40.0 38.0 41.0 32.0 41.0 20-21 37.3547132818794 40.0 38.0 41.0 32.0 41.0 22-23 37.27062260260121 40.0 38.0 41.0 31.0 41.0 24-25 37.186745554969846 40.0 38.0 41.0 31.0 41.0 26-27 37.06325858919401 40.0 37.0 41.0 31.0 41.0 28-29 36.947019558795745 40.0 37.0 41.0 30.5 41.0 30-31 36.7948489700924 40.0 37.0 41.0 30.0 41.0 32-33 36.74634899164205 40.0 37.0 41.0 30.0 41.0 34-35 36.887298842286384 40.0 37.0 41.0 30.0 41.0 36-37 36.8920107565917 40.0 37.0 41.0 30.0 41.0 38-39 36.79118801574119 40.0 37.0 41.0 30.0 41.0 40-41 36.714834697592075 40.0 37.0 41.0 30.0 41.0 42-43 36.59732941792733 40.0 37.0 41.0 30.0 41.0 44-45 36.47460559992574 40.0 36.5 41.0 30.0 41.0 46-47 36.314094259835755 40.0 36.0 41.0 29.5 41.0 48-49 36.173334419104265 40.0 36.0 41.0 29.0 41.0 50-51 36.02153846281359 40.0 35.5 41.0 28.0 41.0 52-53 35.85602097278445 39.5 35.0 41.0 28.0 41.0 54-55 35.64428756021471 39.0 35.0 41.0 28.0 41.0 56-57 35.42070494713704 39.0 35.0 41.0 28.0 41.0 58-59 35.179560196466525 39.0 35.0 41.0 27.0 41.0 60-61 34.898912654287216 38.0 35.0 40.0 26.5 41.0 62-63 34.592988199079 37.5 34.5 40.0 26.0 41.0 64-65 34.25972842465413 37.0 34.0 40.0 26.0 41.0 66-67 33.907127423092604 36.5 34.0 39.0 26.0 41.0 68-69 33.537907495632055 36.0 34.0 39.0 25.5 41.0 70-71 33.13890988598576 35.5 34.0 39.0 24.5 40.0 72-73 32.773406030255714 35.0 33.0 37.5 24.0 40.0 74-75 32.373973283404446 35.0 33.0 37.0 23.5 39.0 76-77 29.68100153665596 33.0 29.0 34.5 19.0 36.5 78-79 31.247828458138972 34.5 31.5 36.0 20.0 37.0 80-81 31.423062769163444 35.0 32.0 35.5 21.0 37.0 82-83 31.2479666660036 35.0 32.5 35.0 20.0 37.0 84-85 31.055363542630186 35.0 32.0 35.0 20.0 36.0 86-87 30.854936859519476 35.0 32.0 35.0 19.5 36.0 88-89 30.595100479396876 35.0 32.0 35.0 17.5 36.0 90-91 30.404955052398808 35.0 32.0 35.0 12.5 35.0 92-93 30.253423493762206 34.0 32.0 35.0 10.0 35.0 94-95 30.155527775843836 34.0 32.0 35.0 4.5 35.0 96-97 29.96865126529611 34.0 32.0 35.0 2.0 35.0 98-99 29.785463267789236 34.0 31.5 35.0 2.0 35.0 100-101 28.675477159026485 33.5 29.0 34.5 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 39149.0 3 13889.0 4 7742.0 5 5441.0 6 4703.0 7 4773.0 8 4947.0 9 5316.0 10 5966.0 11 6352.0 12 6779.0 13 7215.0 14 7908.0 15 8618.0 16 9212.0 17 10025.0 18 9633.0 19 8547.0 20 8060.0 21 8359.0 22 8649.0 23 9802.0 24 11672.0 25 13938.0 26 16900.0 27 20471.0 28 24623.0 29 29902.0 30 36597.0 31 45725.0 32 58360.0 33 77658.0 34 113370.0 35 168513.0 36 295578.0 37 589493.0 38 632765.0 39 76381.0 40 1.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.58008654414548 18.862746498050598 13.78284426703153 25.77432269077239 2 15.024359435530792 20.237560442730047 38.48546307792533 26.25261704381383 3 18.403221160521305 24.666952642060348 28.156971479135194 28.772854718283153 4 13.186477991591847 16.42830855536252 35.18738478575123 35.19782866729441 5 14.468707239638753 37.45497791228502 33.65917393562582 14.417140912450407 6 34.013927113694166 35.02681941209064 16.901720727512036 14.057532746703158 7 29.798788328869374 31.30668441474643 20.299241907791487 18.595285348592704 8 27.14667687788641 35.099534527515594 19.053787931531783 18.700000663066216 9 27.137054714220177 16.023388032220083 18.614778355336796 38.22477889822294 10-11 26.12171357528885 25.303664078111492 27.092281829453885 21.482340517145765 12-13 26.7096749328488 22.35248751100538 27.28894795722132 23.6488895989245 14-15 23.715044728242514 23.925910883354298 24.45044458857684 27.90859979982635 16-17 24.110771036349917 27.194071026424645 24.999238509733505 23.695919427491933 18-19 24.125409060383145 26.589230540661113 26.34544681836859 22.93991358058715 20-21 24.675490173326082 25.56578384632726 26.31438808731285 23.444337893033804 22-23 24.399847246088584 25.378243093801306 26.066982548715174 24.15492711139494 24-25 24.179783010501364 25.67251825513257 25.97025718808796 24.177441546278107 26-27 24.020092359706368 25.836784493051475 26.061342991192966 24.081780156049195 28-29 24.115797204037616 26.081330079721234 25.81969557065582 23.983177145585326 30-31 24.500838196822997 25.72135805086546 25.76342850582116 24.01437524649038 32-33 24.14259949306671 25.774807806963317 25.75358715089275 24.329005549077223 34-35 24.403654705360623 25.869598554364675 25.843466872238665 23.88327986803604 36-37 24.400749793197654 25.899196496212905 25.849257252172876 23.850796458416564 38-39 24.45720755348771 25.84181471352834 25.716557309044102 23.984420423939852 40-41 24.513235772236428 25.663694992373443 25.742934114452044 24.08013512093809 42-43 24.263649183375108 25.63888218283321 25.734848429902264 24.36262020388942 44-45 24.150914541591558 25.71800741480445 25.849738206550647 24.28133983705334 46-47 24.3252013517109 25.712242565299952 25.58138571088737 24.381170372101774 48-49 24.080817366213765 25.78172953424267 25.724431506165185 24.413021593378378 50-51 24.261096707457373 25.75496235341704 25.729288577386853 24.25465236173874 52-53 24.41470303684089 25.69044683047073 25.69504694290411 24.19980318978427 54-55 23.88032268538962 25.438194964355702 26.1197705619103 24.56171178834438 56-57 24.062284162945435 25.60535915182267 25.776174138035003 24.556182547196887 58-59 24.177520801599883 25.648274218450474 25.8789310619955 24.295273917954137 60-61 24.351449244579204 25.593999321552158 25.898699904117954 24.155851529750684 62-63 24.210573001660904 25.552374032192617 25.969382489250957 24.26767047689552 64-65 23.912450895260427 25.366371988133814 26.017453520605905 24.703723595999858 66-67 24.051377211988015 25.66204658781087 25.789618817577725 24.49695738262339 68-69 24.075387052101732 25.627451468185853 25.78809778507517 24.509063694637245 70-71 24.029137889707144 25.349988927419442 25.850204158479727 24.770669024393683 72-73 23.953680175820825 25.66093966637074 25.644523311120814 24.740856846687617 74-75 23.8792383565085 25.642304297172696 25.751407785271734 24.72704956104707 76-77 23.791220419545507 25.24226475567289 25.972293788605604 24.994221036176 78-79 23.778729821775872 25.30901680787639 25.97680253410166 24.93545083624608 80-81 23.926833480999758 25.59573708838027 25.58377310143242 24.893656329187547 82-83 23.9199314038845 25.596262448538926 25.691396655131037 24.792409492445536 84-85 23.812328485686038 25.555453971191916 25.706482968966803 24.925734574155236 86-87 23.622598928161615 25.720803642409233 25.69494698244277 24.961650446986383 88-89 23.630925251512547 25.434695274263863 25.757623936707812 25.176755537515778 90-91 23.66348116340842 25.298251229377016 25.811388832310065 25.2268787749045 92-93 23.686270639816694 25.38370923348545 25.777390594770043 25.15262953192781 94-95 23.513624577019847 25.278448336065644 25.8483071779336 25.359619908980907 96-97 23.253087553172396 25.282954037247514 25.900485395646566 25.563473013933518 98-99 23.167424433622557 25.10423698855911 25.872861748247317 25.85547682957102 100-101 23.219487390733715 25.16496914456407 25.87762175889453 25.737921705807686 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 25.0 1 22.0 2 35.5 3 50.5 4 44.0 5 54.0 6 89.0 7 217.0 8 337.5 9 358.5 10 322.0 11 275.0 12 267.0 13 278.5 14 320.0 15 381.5 16 416.5 17 444.0 18 511.0 19 575.5 20 639.5 21 710.5 22 830.0 23 1009.5 24 1207.5 25 1522.5 26 1944.5 27 2499.0 28 3237.5 29 4314.0 30 6174.0 31 9158.5 32 13423.0 33 18324.0 34 23536.5 35 29374.5 36 36987.5 37 44814.5 38 52031.0 39 59004.5 40 64518.0 41 69524.5 42 75375.0 43 82330.5 44 89524.5 45 96710.5 46 100280.0 47 103545.5 48 108098.0 49 110362.0 50 110643.0 51 109735.0 52 108587.5 53 106759.0 54 104662.0 55 100055.5 56 92179.0 57 82823.5 58 74272.0 59 64922.0 60 53650.5 61 43839.5 62 35958.5 63 27774.0 64 19990.0 65 14690.0 66 11280.5 67 8749.0 68 6845.0 69 5326.0 70 3997.0 71 2875.5 72 2030.5 73 1540.0 74 1200.0 75 929.5 76 664.5 77 392.5 78 241.5 79 148.0 80 93.5 81 53.0 82 29.5 83 20.5 84 13.0 85 8.0 86 5.5 87 4.5 88 3.0 89 4.5 90 4.5 91 2.0 92 1.5 93 1.0 94 1.0 95 1.5 96 1.0 97 1.0 98 0.5 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.1694134184710356 2 1.6576655427694286E-4 3 0.009821668340908864 4 0.005636062845416057 5 0.02507219133438761 6 0.0016991071813386646 7 4.1441638569235716E-5 8 0.0 9 1.2432491570770715E-4 10-11 0.04962636218665978 12-13 3.108122892692679E-4 14-15 0.005263088098292935 16-17 2.0720819284617858E-5 18-19 0.0013468532535001608 20-21 3.3153310855388573E-4 22-23 2.0720819284617858E-5 24-25 4.972996628308286E-4 26-27 0.003108122892692679 28-29 0.005138763182585228 30-31 0.017094675909809735 32-33 0.011955912727224504 34-35 0.0104432929194474 36-37 0.004144163856923571 38-39 4.1441638569235716E-5 40-41 0.0034189351819619465 42-43 0.008474815087408704 44-45 0.00648561643608539 46-47 0.003729747471231214 48-49 0.008661302460970265 50-51 0.002652264868431086 52-53 0.0019684778320386963 54-55 0.0038747932062235396 56-57 0.007770307231731697 58-59 0.014794664969217152 60-61 0.007107241014623925 62-63 0.020347844537494737 64-65 0.04013622695430479 66-67 0.06038046739537644 68-69 0.050227265945913695 70-71 0.06920753641062365 72-73 0.0332983565903809 74-75 0.026667694419303185 76-77 0.23180380533702 78-79 0.08615716658544105 80-81 0.06748770841000036 82-83 0.026957785889287832 84-85 0.05153267756084461 86-87 0.06883456166350052 88-89 0.2999338591448435 90-91 0.30426451037532865 92-93 0.05428854652569879 94-95 0.010008155714470425 96-97 0.014960431523494095 98-99 8.702744099539501E-4 100-101 2.072081928461786E-4 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 2413032.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 60.82915581128533 #Duplication Level Percentage of deduplicated Percentage of total 1 78.61394002334785 47.820196066192665 2 11.95955752415335 14.549795761415082 3 3.894263370527374 7.106542600079726 4 1.8169154839701633 4.420857402814319 5 0.9945764492477545 3.024962289876329 6 0.5997858161324492 2.1890678917751814 7 0.4159790084333597 1.7712556342751768 8 0.29242169626210723 1.423021193962246 9 0.21063903871375414 1.153169541527248 >10 1.1296198749656476 11.835129221872567 >50 0.05148936819677129 2.0930025636935152 >100 0.019651182605910738 2.080845574461346 >500 0.0010245559795724786 0.4338918579690888 >1k 1.366074639425119E-4 0.09826240008562304 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 8.288327713847143E-5 0.0 3 0.0 0.0 0.0 8.288327713847143E-5 0.0 4 0.0 0.0 0.0 1.2432491570770715E-4 0.0 5 0.0 0.0 0.0 1.2432491570770715E-4 0.0 6 0.0 0.0 0.0 1.2432491570770715E-4 4.1441638569235716E-5 7 0.0 0.0 0.0 1.2432491570770715E-4 4.1441638569235716E-5 8 0.0 0.0 0.0 1.2432491570770715E-4 4.1441638569235716E-5 9 0.0 0.0 0.0 1.2432491570770715E-4 4.1441638569235716E-5 10-11 0.0 0.0 0.0 1.2432491570770715E-4 8.288327713847143E-5 12-13 0.0 0.0 0.0 1.2432491570770715E-4 2.0720819284617857E-4 14-15 0.0 0.0 0.0 1.2432491570770715E-4 2.0720819284617857E-4 16-17 0.0 0.0 0.0 2.2792901213079645E-4 2.0720819284617857E-4 18-19 0.0 0.0 0.0 3.522539278385036E-4 2.0720819284617857E-4 20-21 0.0 0.0 0.0 3.936955664077393E-4 2.486498314154143E-4 22-23 0.0 0.0 0.0 4.558580242615929E-4 2.9009146998465E-4 24-25 0.0 0.0 0.0 6.216245785385357E-4 3.7297474712312144E-4 26-27 0.0 0.0 0.0 9.117160485231858E-4 4.1441638569235715E-4 28-29 0.0 0.0 0.0 0.0019477570127540787 4.1441638569235715E-4 30-31 0.0 0.0 0.0 0.006837870363923893 4.1441638569235715E-4 32-33 0.0 0.0 0.0 0.01931180357326384 4.1441638569235715E-4 34-35 0.0 0.0 0.0 0.036095667193804304 4.558580242615929E-4 36-37 0.0 0.0 0.0 0.06535346402368472 4.558580242615929E-4 38-39 0.0 0.0 0.0 0.11576721734315998 4.972996628308286E-4 40-41 0.0 0.0 0.0 0.1760026390035441 4.972996628308286E-4 42-43 0.0 0.0 0.0 0.24152186958150576 5.180204821154464E-4 44-45 0.0 0.0 0.0 0.32003305385092284 5.594621206846822E-4 46-47 0.0 0.0 0.0 0.41311097407742625 5.801829399693E-4 48-49 0.0 0.0 0.0 0.5134204602342614 6.216245785385357E-4 50-51 0.0 0.0 0.0 0.6232200816234512 6.216245785385357E-4 52-53 0.0 0.0 0.0 0.7364179173753187 6.216245785385357E-4 54-55 0.0 0.0 0.0 0.8613644576615644 6.423453978231537E-4 56-57 0.0 0.0 0.0 1.0036750445083198 6.630662171077715E-4 58-59 0.0 0.0 0.0 1.1673695168568008 6.837870363923893E-4 60-61 0.0 0.0 0.0 1.353235265839823 7.045078556770072E-4 62-63 0.0 0.0 0.0 1.5435352701497536 7.459494942462429E-4 64-65 0.0 0.0 0.0 1.743636221981308 7.666703135308607E-4 66-67 0.0 0.0 0.0 1.9706742388828662 7.873911328154786E-4 68-69 0.0 0.0 0.0 2.2176871255747956 7.873911328154786E-4 70-71 4.1441638569235716E-5 0.0 0.0 2.491699239794582 7.873911328154786E-4 72-73 4.1441638569235716E-5 0.0 0.0 2.7767762715123547 8.909952292385679E-4 74-75 4.1441638569235716E-5 0.0 0.0 3.072876779089544 9.117160485231858E-4 76-77 4.1441638569235716E-5 0.0 0.0 3.3959557933753057 9.324368678078037E-4 78-79 4.1441638569235716E-5 0.0 0.0 3.7600413090253255 9.531576870924215E-4 80-81 6.216245785385358E-5 0.0 0.0 4.145117014610664 9.738785063770393E-4 82-83 8.288327713847143E-5 0.0 0.0 4.554373916301151 0.0010360409642308928 84-85 8.288327713847143E-5 0.0 0.0 4.985056145131933 0.0010360409642308928 86-87 8.288327713847143E-5 0.0 0.0 5.429517718786986 0.0010567617835155107 88-89 8.288327713847143E-5 0.0 0.0 5.912147041564306 0.0010774826028001287 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 2025 0.0 49.77471 1 GTATCAA 3920 0.0 45.239796 1 TCAACGC 4880 0.0 35.78912 4 ATCAACG 4970 0.0 35.045536 3 CAACGCA 5020 0.0 34.62634 5 TATCAAC 5175 0.0 34.024094 2 AACGCAG 5470 0.0 31.773127 6 GTACATG 8820 0.0 28.246237 1 TACATGG 9205 0.0 26.604124 2 ACGCAGA 6510 0.0 26.404366 7 ACATGGG 9565 0.0 25.007402 3 CGCAGAG 6820 0.0 24.786419 8 CATGGGG 7620 0.0 22.234957 4 TATAGGG 375 0.0 21.514967 2 CTATACT 925 0.0 21.036098 4 TACCGTA 160 5.0050978E-5 20.77429 7 GCAGAGT 7785 0.0 20.372108 9 ATGGGGG 4645 0.0 19.93784 5 AGAGTAC 6660 0.0 18.858173 10-11 GTACCGT 370 1.4370016E-10 17.9677 6 >>END_MODULE