##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921704_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2978522 Sequences flagged as poor quality 0 Sequence length 101 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.424500809461875 31.0 31.0 34.0 26.0 34.0 2 30.478106926858356 31.0 31.0 34.0 26.0 34.0 3 30.541098235970725 33.0 31.0 34.0 26.0 34.0 4 33.99170729643763 37.0 35.0 37.0 30.0 37.0 5 33.98790071048661 37.0 35.0 37.0 30.0 37.0 6 34.029242355772425 37.0 35.0 37.0 30.0 37.0 7 33.95196275199579 37.0 35.0 37.0 30.0 37.0 8 33.91987200363133 37.0 35.0 37.0 30.0 37.0 9 35.47804347256794 39.0 37.0 39.0 30.0 39.0 10-11 35.37763696222489 39.0 36.0 39.0 30.0 39.0 12-13 35.26998239395243 39.0 35.0 39.0 29.0 39.0 14-15 36.41615740961457 40.0 37.0 41.0 29.0 41.0 16-17 36.357345522376534 40.0 37.0 41.0 28.0 41.0 18-19 36.32017205177601 40.0 37.0 41.0 28.0 41.0 20-21 36.24177578678284 40.0 37.0 41.0 27.0 41.0 22-23 36.142634165535796 40.0 36.5 41.0 27.0 41.0 24-25 36.03782211445811 40.0 36.0 41.0 27.0 41.0 26-27 35.89363315093862 40.0 36.0 41.0 27.0 41.0 28-29 35.75484149521138 40.0 36.0 41.0 27.0 41.0 30-31 35.612061116218044 40.0 36.0 41.0 26.0 41.0 32-33 35.44387703028549 39.5 35.0 41.0 25.0 41.0 34-35 35.279978291246465 39.0 35.0 41.0 25.0 41.0 36-37 35.25497159329359 39.0 35.0 41.0 25.0 41.0 38-39 35.446369038066535 40.0 35.0 41.0 25.0 41.0 40-41 35.51568412118493 40.0 35.0 41.0 25.0 41.0 42-43 35.366006529412914 40.0 35.0 41.0 24.5 41.0 44-45 35.25266877330434 40.0 35.0 41.0 24.0 41.0 46-47 35.09849499181138 40.0 35.0 41.0 23.5 41.0 48-49 34.94000917233447 39.5 35.0 41.0 23.0 41.0 50-51 33.24963992208216 37.0 32.5 39.5 19.0 40.0 52-53 33.36986079001599 37.5 33.5 39.5 20.0 40.0 54-55 34.28687046797036 39.0 34.0 40.5 21.5 41.0 56-57 34.308630253528435 39.0 34.0 41.0 21.0 41.0 58-59 34.124037358125946 38.5 34.0 41.0 20.0 41.0 60-61 33.87251714105184 38.0 34.0 40.0 19.5 41.0 62-63 33.57891430716309 37.0 34.0 40.0 18.0 41.0 64-65 33.28896815266095 37.0 33.5 40.0 17.5 41.0 66-67 32.94750836152964 36.0 33.0 39.5 13.5 41.0 68-69 32.58354529528404 36.0 33.0 39.0 12.0 41.0 70-71 32.173799287028935 35.0 32.5 39.0 8.0 40.5 72-73 31.809386165353153 35.0 32.0 37.5 7.0 40.0 74-75 31.41024440981131 35.0 32.0 37.0 2.0 39.0 76-77 31.030848017909555 35.0 32.0 36.5 2.0 39.0 78-79 30.693916479381386 35.0 32.0 36.0 2.0 38.0 80-81 30.387195058488743 35.0 31.0 36.0 2.0 37.0 82-83 30.089018647503693 35.0 31.0 35.0 2.0 37.0 84-85 29.83817947290636 35.0 31.0 35.0 2.0 36.0 86-87 29.62181209338054 35.0 31.0 35.0 2.0 36.0 88-89 29.420111048365598 35.0 31.0 35.0 2.0 36.0 90-91 29.21645114590391 34.5 31.0 35.0 2.0 35.0 92-93 29.045108110666966 34.0 30.0 35.0 2.0 35.0 94-95 28.83273264390862 34.0 30.0 35.0 2.0 35.0 96-97 28.614618928448404 34.0 30.0 35.0 2.0 35.0 98-99 28.368363067319965 34.0 30.0 35.0 2.0 35.0 100-101 27.31619390422498 33.5 27.5 35.0 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 100023.0 3 17198.0 4 11694.0 5 9005.0 6 8058.0 7 8323.0 8 8819.0 9 9628.0 10 10352.0 11 11129.0 12 10794.0 13 11038.0 14 11390.0 15 12240.0 16 11927.0 17 12545.0 18 12214.0 19 11878.0 20 11927.0 21 12533.0 22 13860.0 23 15867.0 24 18678.0 25 21947.0 26 26224.0 27 31008.0 28 36841.0 29 43725.0 30 52514.0 31 64110.0 32 80013.0 33 103262.0 34 144829.0 35 210578.0 36 352238.0 37 645837.0 38 697318.0 39 106951.0 40 7.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.59547208220729 17.358496270405276 12.778779017523467 25.267252629863968 2 16.166164736731226 19.308448853378778 39.08850912529119 25.436877284598808 3 19.69450378283649 23.345298820228077 28.402150562200934 28.558046834734498 4 13.53763098009583 15.507284017026446 36.21758613263197 34.73749887024575 5 14.90934979057203 36.70477593878058 33.8325201137869 14.553354156860493 6 34.0820385950209 34.428589272475264 17.289524438857192 14.19984769364665 7 29.979181357241192 30.874618045062284 20.44088512810181 18.70531546959471 8 27.07675796708564 34.085825550349554 19.70673992459967 19.13067655796514 9 27.092000126245587 15.802287328233819 18.740485414270182 38.36522713125042 10-11 26.02381266976941 24.86729465782194 27.53951695372971 21.569375718678945 12-13 26.808571013599682 22.102976079037486 27.16522364038884 23.923229266973994 14-15 23.865380229662993 23.596329449414053 24.5161166808125 28.02217364011045 16-17 24.270929114945993 26.58174412817435 25.180374477699857 23.966952279179797 18-19 24.147769721124902 26.180094452549596 26.25780878814995 23.41432703817555 20-21 24.87994984422023 25.374405373948676 26.107567626015726 23.638077155815367 22-23 24.552894078505112 25.264236547442337 25.813272895784696 24.36959647826786 24-25 24.377723974197117 25.37456796765874 25.886222555387967 24.361485502756175 26-27 24.277217116524913 25.572281646438366 25.862152049316922 24.2883491877198 28-29 24.39456559167261 25.79356158636264 25.613400705768623 24.19847211619613 30-31 24.700080938734867 25.561647832727285 25.51893716242999 24.21933406610786 32-33 24.36554418837033 25.541163114985554 25.537117129761295 24.55617556688282 34-35 24.673327370328142 25.5940509622061 25.57598735413133 24.156634313334436 36-37 24.675352144949642 25.514349269841347 25.534124347636467 24.276174237572548 38-39 24.545653859235205 25.62267471707134 25.574158751625454 24.257512672068 40-41 24.774239100911437 25.37165731682873 25.61710105446296 24.237002527796868 42-43 24.5440091054308 25.322763055360692 25.54164878095896 24.59157905824955 44-45 24.46643515637038 25.458994619101418 25.641441868195237 24.43312835633297 46-47 24.600147838559216 25.38232282840667 25.431310753354207 24.5862185796799 48-49 24.404474994670984 25.441324200567543 25.57196292720252 24.582237877558956 50-51 24.46520740172268 25.502140314316502 25.600113988601812 24.432538295359002 52-53 24.65644991912807 25.40354369456353 25.58377689239811 24.356229493910295 54-55 24.264874360345225 25.19658586102605 25.896795240823778 24.641744537804946 56-57 24.33529334474874 25.344813344116172 25.71390742247704 24.60598588865805 58-59 24.449086682008932 25.315967341769003 25.73264143953035 24.502304536691717 60-61 24.500026332336294 25.234505018539476 25.835000066461806 24.43046858266242 62-63 24.399655994557286 25.272892815252522 25.884222518763167 24.443228671427022 64-65 24.244105040488577 25.07467010399812 25.869452062583925 24.81177279292938 66-67 24.2655384957538 25.31897616067149 25.717041317050267 24.698444026524445 68-69 24.3650859336835 25.268765652903554 25.73630047115156 24.629847942261392 70-71 24.276717415047024 25.0282796724621 25.82032916950024 24.874673742990634 72-73 24.273631780535794 25.11491549648339 25.753822778132175 24.857629944848636 74-75 24.190294604408887 25.18984948303004 25.808931564017907 24.81092434854316 76-77 24.120553481023144 24.904459273720587 25.95208926318878 25.022897982067494 78-79 24.098928467297213 24.971949427707756 25.96768796154737 24.961434143447658 80-81 24.176087481066105 25.10007494473373 25.80747313751231 24.916364436687854 82-83 24.144037214229673 25.142757916192938 25.8988444252102 24.814360444367193 84-85 24.156028533466184 25.064133334746646 25.895464893697746 24.88437323808942 86-87 23.96209824467517 25.18686245257442 25.92397939822002 24.927059904530388 88-89 24.020939264924714 24.945214397940603 25.95986915735933 25.07397717977536 90-91 23.996804583843662 24.90460703348321 26.041059784977506 25.057528597695626 92-93 24.00719284874942 24.850952508923328 26.138341851815266 25.003512790511984 94-95 23.935882788794434 24.76499684385027 26.15282765268453 25.14629271467077 96-97 23.848106855804378 24.71432605722668 26.18834604472566 25.249221042243292 98-99 23.71649695323583 24.543422910387605 26.24883674358884 25.491243392787727 100-101 23.854540387328175 24.532837602815782 26.345545847163 25.267076162693048 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 17.0 1 18.0 2 38.0 3 54.5 4 56.0 5 63.0 6 93.0 7 198.5 8 318.0 9 387.0 10 362.0 11 329.5 12 377.5 13 450.0 14 531.5 15 639.0 16 786.0 17 863.0 18 907.5 19 994.0 20 1083.5 21 1176.5 22 1251.5 23 1350.5 24 1493.0 25 1669.5 26 1957.0 27 2307.5 28 2734.5 29 3437.0 30 4484.5 31 6301.0 32 9694.5 33 13992.5 34 19729.5 35 27631.5 36 37641.5 37 48249.5 38 58668.0 39 69524.5 40 78518.0 41 86712.0 42 96287.5 43 105911.0 44 114897.0 45 123796.0 46 129612.0 47 134304.5 48 139664.5 49 142183.5 50 141673.5 51 139688.0 52 137921.5 53 135367.0 54 131828.5 55 125162.5 56 114533.5 57 102684.5 58 92426.5 59 80871.0 60 66466.5 61 54474.0 62 44676.5 63 34386.0 64 25138.5 65 18655.0 66 14087.0 67 10959.5 68 8404.0 69 6392.5 70 4975.0 71 3658.5 72 2598.0 73 1949.0 74 1494.0 75 1113.0 76 823.0 77 573.5 78 398.0 79 271.5 80 198.0 81 155.5 82 129.5 83 111.5 84 94.0 85 71.0 86 49.5 87 47.0 88 46.0 89 43.0 90 37.0 91 26.0 92 21.0 93 23.5 94 21.0 95 16.0 96 12.0 97 8.0 98 9.5 99 10.0 100 5.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.055631618635014285 2 0.07866317589730745 3 0.07332495781464766 4 0.07423144767774084 5 0.06986686685544038 6 0.010542141370787256 7 0.014168100823159942 8 0.01849910794682732 9 0.0067147397266160876 10-11 0.013479840001181794 12-13 0.02331693370067436 14-15 0.04038915945559576 16-17 0.027799022468190597 18-19 0.010307125480355693 20-21 0.020144219179848263 22-23 0.03772005041426587 24-25 0.03441304109890744 26-27 0.021470380275854937 28-29 0.011767581370894691 30-31 0.01153256548046313 32-33 0.008762735343233994 34-35 0.005304644384026709 36-37 8.561293151435511E-4 38-39 0.004062417534602732 40-41 0.001309374246690137 42-43 0.23865863673325224 44-45 0.20667968878524315 46-47 0.21356229700502466 48-49 0.2210995923481512 50-51 0.21134643289524133 52-53 0.21953841536171298 54-55 0.21524098193667868 56-57 0.21874943344383557 58-59 0.22746180823911993 60-61 0.23133957043124073 62-63 0.21742327234782888 64-65 0.21651678248473571 66-67 0.21472058960786594 68-69 0.20916414248409113 70-71 0.20078750467513753 72-73 0.21279010193646378 74-75 0.21148072768977366 76-77 0.204749201113841 78-79 0.223516898649733 80-81 0.23498231673292996 82-83 0.23402546632188717 84-85 0.22774718467750113 86-87 0.24910005700814028 88-89 0.24060591125397093 90-91 0.2481432065970975 92-93 0.24298964385691965 94-95 0.24638058741886076 96-97 0.2539850301592535 98-99 0.24633022687091116 100-101 0.2535821457756565 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 2978522.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 65.24487929201919 #Duplication Level Percentage of deduplicated Percentage of total 1 81.52179549392864 53.188797066700474 2 10.76690778754408 14.049711978932297 3 3.1660184858313345 6.196994818331003 4 1.4647042839150803 3.822578168101713 5 0.7955159662522141 2.5951671596499857 6 0.5217110670749616 2.0423385357969837 7 0.33288566699643507 1.5203359612857992 8 0.24905441663726505 1.299962028051409 9 0.19445737311162922 1.1418613052500248 >10 0.93225401088131 10.556753071193237 >50 0.042025799400325754 1.8455099092584217 >100 0.011793536068512968 1.3033743751586107 >500 7.215042952194205E-4 0.30292415421330954 >1k 1.5460806306459582E-4 0.1336914680766548 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 3.3573698633080436E-5 2 0.0 0.0 0.0 0.0 3.3573698633080436E-5 3 0.0 0.0 0.0 0.0 3.3573698633080436E-5 4 0.0 0.0 0.0 0.0 6.714739726616087E-5 5 0.0 0.0 0.0 0.0 6.714739726616087E-5 6 0.0 0.0 0.0 0.0 6.714739726616087E-5 7 0.0 0.0 0.0 6.714739726616087E-5 6.714739726616087E-5 8 0.0 0.0 0.0 6.714739726616087E-5 1.0072109589924131E-4 9 0.0 0.0 0.0 1.0072109589924131E-4 1.0072109589924131E-4 10-11 0.0 0.0 0.0 1.0072109589924131E-4 1.0072109589924131E-4 12-13 0.0 0.0 0.0 1.3429479453232174E-4 2.0144219179848261E-4 14-15 0.0 0.0 0.0 1.6786849316540218E-4 3.021632876977239E-4 16-17 0.0 0.0 0.0 1.6786849316540218E-4 3.693106849638848E-4 18-19 0.0 1.6786849316540218E-5 0.0 2.3501589043156305E-4 4.1967123291350547E-4 20-21 0.0 3.3573698633080436E-5 0.0 2.5180273974810324E-4 4.5324493154658585E-4 22-23 0.0 3.3573698633080436E-5 0.0 2.8537643838118373E-4 5.036054794962065E-4 24-25 0.0 3.3573698633080436E-5 0.0 3.3573698633080436E-4 5.37179178129287E-4 26-27 0.0 3.3573698633080436E-5 0.0 5.875397260789076E-4 5.707528767623674E-4 28-29 0.0 3.3573698633080436E-5 0.0 0.0015779638357547804 5.707528767623674E-4 30-31 0.0 3.3573698633080436E-5 0.0 0.007587655891076178 5.707528767623674E-4 32-33 0.0 3.3573698633080436E-5 0.0 0.02393804712538635 6.043265753954477E-4 34-35 0.0 6.714739726616087E-5 0.0 0.0476242915110246 6.714739726616087E-4 36-37 0.0 6.714739726616087E-5 0.0 0.08421962302108227 6.714739726616087E-4 38-39 0.0 6.714739726616087E-5 0.0 0.14950368001310715 7.218345206112293E-4 40-41 0.0 6.714739726616087E-5 0.0 0.22373512769084802 7.386213699277696E-4 42-43 0.0 6.714739726616087E-5 0.0 0.30503383893085223 7.386213699277696E-4 44-45 0.0 6.714739726616087E-5 0.0 0.4025486466106344 7.7219506856085E-4 46-47 0.0 6.714739726616087E-5 0.0 0.5175553512782514 8.057687671939305E-4 48-49 0.0 6.714739726616087E-5 0.0 0.6408043989602897 8.729161644600912E-4 50-51 0.0 6.714739726616087E-5 0.0 0.7732358532184755 9.064898630931717E-4 52-53 0.0 6.714739726616087E-5 0.0 0.9105019200798248 9.400635617262522E-4 54-55 0.0 1.0072109589924131E-4 0.0 1.0653270313262753 9.736372603593326E-4 56-57 0.0 1.0072109589924131E-4 0.0 1.2457520877804495 9.904241096758727E-4 58-59 0.0 1.0072109589924131E-4 0.0 1.442963993551164 0.001007210958992413 60-61 0.0 1.0072109589924131E-4 0.0 1.65545193219993 0.001007210958992413 62-63 0.0 1.0072109589924131E-4 0.0 1.869517834684451 0.0010407846576254935 64-65 0.0 1.0072109589924131E-4 0.0 2.1023514347048637 0.0010407846576254935 66-67 0.0 1.0072109589924131E-4 0.0 2.380039496099072 0.0010407846576254935 68-69 0.0 1.0072109589924131E-4 0.0 2.6765624024264385 0.0010407846576254935 70-71 0.0 1.3429479453232174E-4 0.0 2.9990545646464923 0.0010407846576254935 72-73 0.0 1.3429479453232174E-4 0.0 3.3306619860454276 0.0011750794521578152 74-75 0.0 1.3429479453232174E-4 0.0 3.6766557373086384 0.0011918663014743554 76-77 0.0 1.3429479453232174E-4 0.0 4.064666972411149 0.0012086531507908957 78-79 0.0 1.3429479453232174E-4 0.0 4.492295171900695 0.0012086531507908957 80-81 0.0 1.3429479453232174E-4 0.0 4.942182733583972 0.001242226849423976 82-83 0.0 1.3429479453232174E-4 0.0 5.415420802666557 0.0013429479453232174 84-85 0.0 1.3429479453232174E-4 0.0 5.91200937914845 0.0013429479453232174 86-87 0.0 1.5108164384886196E-4 0.0 6.44359853645533 0.0013429479453232174 88-89 0.0 2.0144219179848261E-4 0.0 7.00861031075144 0.0013429479453232174 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 3760 0.0 44.058746 1 GGTATCA 1955 0.0 42.73271 1 TCAACGC 4375 0.0 36.565228 4 CAACGCA 4540 0.0 34.91736 5 ATCAACG 4635 0.0 34.20628 3 TATCAAC 4845 0.0 33.507458 2 AACGCAG 5110 0.0 31.282188 6 GTACATG 8560 0.0 27.504417 1 ACGCAGA 6090 0.0 25.550285 7 TACATGG 9060 0.0 25.463446 2 ACATGGG 9275 0.0 24.514935 3 CGCAGAG 6445 0.0 23.924528 8 CATGGGG 7945 0.0 21.807978 4 GTATAGC 1070 0.0 21.737362 1 TAGCCCT 2260 0.0 19.113903 4 GCAGAGT 7645 0.0 18.92834 9 GTATATA 880 0.0 18.33964 1 GTGTAGC 2060 0.0 18.20348 1 ATGGGGG 4545 0.0 17.857183 5 AGAGTAC 6320 0.0 17.641872 10-11 >>END_MODULE