##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921703_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2974337 Sequences flagged as poor quality 0 Sequence length 101 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.555701321000278 31.0 31.0 34.0 27.0 34.0 2 30.616830574343123 33.0 31.0 34.0 27.0 34.0 3 30.675714957652747 33.0 31.0 34.0 27.0 34.0 4 34.13562350197708 37.0 35.0 37.0 30.0 37.0 5 34.12814553293725 37.0 35.0 37.0 30.0 37.0 6 34.17257694740038 37.0 35.0 37.0 30.0 37.0 7 34.09625405594591 37.0 35.0 37.0 30.0 37.0 8 34.06061922371271 37.0 35.0 37.0 30.0 37.0 9 35.635568867952756 39.0 37.0 39.0 30.0 39.0 10-11 35.53449037550217 39.0 37.0 39.0 30.0 39.0 12-13 35.429779476905274 39.0 37.0 39.0 30.0 39.0 14-15 36.58213023608286 40.0 37.0 41.0 30.0 41.0 16-17 36.524906559007945 40.0 37.0 41.0 29.5 41.0 18-19 36.484962194936216 40.0 37.0 41.0 29.0 41.0 20-21 36.40342688135205 40.0 37.0 41.0 29.0 41.0 22-23 36.304285795456266 40.0 37.0 41.0 28.0 41.0 24-25 36.18949332237739 40.0 36.5 41.0 27.5 41.0 26-27 36.04519998910681 40.0 36.0 41.0 27.0 41.0 28-29 35.905833299992565 40.0 36.0 41.0 27.0 41.0 30-31 35.75823721387321 40.0 36.0 41.0 27.0 41.0 32-33 35.58599008787505 40.0 35.5 41.0 26.0 41.0 34-35 35.41422760769879 39.0 35.0 41.0 25.0 41.0 36-37 35.38393850461464 39.0 35.0 41.0 25.5 41.0 38-39 35.571736491191146 40.0 35.5 41.0 26.0 41.0 40-41 35.634104676100925 40.0 35.5 41.0 26.0 41.0 42-43 35.46805506571717 40.0 35.0 41.0 25.0 41.0 44-45 35.34293356805231 40.0 35.0 41.0 24.5 41.0 46-47 35.17430489551117 40.0 35.0 41.0 24.0 41.0 48-49 35.00360349213959 39.0 35.0 41.0 23.0 41.0 50-51 33.281373798597805 37.0 32.5 39.5 20.5 40.0 52-53 33.39778411121537 37.5 33.5 39.5 21.0 40.0 54-55 34.303925547105116 39.0 34.0 40.5 22.0 41.0 56-57 34.30829206643362 39.0 34.0 41.0 22.0 41.0 58-59 34.1007172354713 38.0 34.0 41.0 21.0 41.0 60-61 33.83154834169766 37.5 34.0 40.0 20.0 41.0 62-63 33.52127885979296 37.0 34.0 40.0 19.5 41.0 64-65 33.214196810919546 36.5 33.5 40.0 18.0 41.0 66-67 32.8624480010167 36.0 33.0 39.0 16.0 41.0 68-69 32.4951365632072 35.5 33.0 39.0 13.0 41.0 70-71 32.08014138949285 35.0 32.5 38.5 9.5 40.0 72-73 31.72158618878762 35.0 32.0 37.0 7.5 39.5 74-75 31.33172165763328 35.0 32.0 37.0 4.5 39.0 76-77 30.966350147948937 35.0 32.0 36.0 2.0 39.0 78-79 30.645871500102373 35.0 32.0 36.0 2.0 37.5 80-81 30.358157128798787 35.0 31.0 35.5 2.0 37.0 82-83 30.07304232842479 35.0 31.0 35.0 2.0 36.5 84-85 29.836782449332407 35.0 31.0 35.0 2.0 36.0 86-87 29.631141494726386 35.0 31.0 35.0 2.0 36.0 88-89 29.437136410568137 35.0 31.0 35.0 2.0 35.5 90-91 29.233394198438173 34.5 31.0 35.0 2.0 35.0 92-93 29.067067047210855 34.0 30.5 35.0 2.0 35.0 94-95 28.856100536018616 34.0 30.0 35.0 2.0 35.0 96-97 28.639341137201335 34.0 30.0 35.0 2.0 35.0 98-99 28.39103874241554 34.0 30.0 35.0 2.0 35.0 100-101 27.32999001121931 33.5 27.5 35.0 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 92239.0 3 16339.0 4 11439.0 5 8915.0 6 7984.0 7 8346.0 8 8794.0 9 9415.0 10 10356.0 11 11020.0 12 10904.0 13 11178.0 14 11725.0 15 12426.0 16 12462.0 17 13170.0 18 12593.0 19 11882.0 20 12080.0 21 12718.0 22 13678.0 23 15925.0 24 18540.0 25 21881.0 26 25954.0 27 30865.0 28 36809.0 29 43580.0 30 52276.0 31 64124.0 32 80322.0 33 105134.0 34 146895.0 35 216954.0 36 368624.0 37 668920.0 38 662528.0 39 95335.0 40 8.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.49743978568338 17.17321526723309 13.051677241440554 25.277667705642966 2 16.17578729169772 19.1994570993778 38.797140014595335 25.82761559432915 3 19.540973921480823 23.161579292485634 28.420482099173938 28.87696468685961 4 13.888260863714052 15.365779805401914 35.43922510665213 35.3067342242319 5 15.179118421729912 36.41084921069338 33.39263408018856 15.01739828738815 6 34.40342510063738 34.01459426962076 16.898405000060524 14.683575629681336 7 30.145956856865304 30.89684094714087 20.224811287034363 18.732390908959466 8 27.38130625662436 33.746375096170915 19.51778691214686 19.354531735057865 9 27.34801800032816 15.725977819679319 18.636842303461002 38.289161876531516 10-11 26.280086692243042 24.628152584669273 27.12135316833383 21.97040755475386 12-13 27.011579965588478 21.978462282933442 26.812199628511625 24.197758122966455 14-15 24.09082103246568 23.375337007001136 24.134628579269965 28.399213381263216 16-17 24.476873297615523 26.410716486639956 24.914324839717963 24.198085376026558 18-19 24.467888368946422 25.863495096076157 26.0941908450001 23.57442568997733 20-21 25.040075621613493 25.04478347730965 25.938183164506267 23.97695773657059 22-23 24.92441554156712 24.813765174697256 25.72977532426191 24.532043959473715 24-25 24.653202436482736 25.136523715651304 25.62813521090192 24.58213863696404 26-27 24.428820633966517 25.24466265095692 25.708220715513725 24.61829599956284 28-29 24.623027544977028 25.50362887843791 25.43262999663247 24.440713579952593 30-31 24.844199626227052 25.204791664284915 25.316728525035998 24.634280184452038 32-33 24.53123190102816 25.275205242866033 25.32328703975339 24.870275816352418 34-35 24.877672370750307 25.278034150531997 25.35926648813036 24.48502699058734 36-37 25.019277538217604 25.162705448461857 25.32099391574501 24.497023097575525 38-39 24.859518025704176 25.271289159360844 25.270667148584923 24.598525666350056 40-41 24.968530389355738 25.11977616230788 25.37176839711421 24.53992505122217 42-43 24.77801631109627 25.113700195405624 25.27033807296154 24.83794542053656 44-45 24.65017647608709 25.148789848182563 25.41563887206894 24.785394803661408 46-47 24.904521759841717 25.194228503983616 25.194447481114484 24.706802255060182 48-49 24.647870003918264 25.158440389319814 25.238827135142383 24.95486247161954 50-51 24.687180067652584 25.263382541644475 25.367967468007187 24.681469922695754 52-53 25.006565465566894 25.09633420451741 25.30828208844975 24.588818241465948 54-55 24.527666874305368 24.95041769742044 25.556691261015995 24.965224167258196 56-57 24.557985139945544 25.090559142059938 25.508957202045934 24.842498515948584 58-59 24.731200004582274 25.01063441061106 25.415171601903598 24.84299398290307 60-61 24.65867432206588 24.964115316189552 25.62447773464877 24.7527326270958 62-63 24.656015208892338 25.038865316371 25.639603761593264 24.66551571314339 64-65 24.4846475713044 24.83470113804047 25.57462958096663 25.106021709688502 66-67 24.45234074629317 25.109189908492546 25.496932205316945 24.94153713989733 68-69 24.5887242159404 24.947578328479274 25.496849983484793 24.966847472095534 70-71 24.52077305539925 24.802427044576717 25.51622108364448 25.16057881637955 72-73 24.45645024281759 24.90585354539285 25.484974045611743 25.15272216617782 74-75 24.439905154403704 25.0555559579417 25.518599476115693 24.985939411538897 76-77 24.423216915040438 24.66929441277757 25.696857450556276 25.21063122162571 78-79 24.34171447862587 24.786316003330132 25.675350592021502 25.196618926022495 80-81 24.494403981487565 24.857273307758273 25.537168918383884 25.111153792370278 82-83 24.385829805565773 24.908394854106515 25.64096645808655 25.064808882241163 84-85 24.344218852817214 24.944330242871423 25.66723686963624 25.04421403467512 86-87 24.315709888593023 25.02362787707 25.570527506994 25.090134727342978 88-89 24.194419629994933 24.795801698420362 25.688565872338447 25.321212799246258 90-91 24.153525306242322 24.77537006123751 25.761306984392462 25.309797648127702 92-93 24.24526510476525 24.67316514437751 25.904009599949855 25.177560150907386 94-95 24.07484759891306 24.54828973283663 25.973923781848622 25.40293888640169 96-97 24.168337423021356 24.474617478521136 25.944562905535452 25.41248219292206 98-99 23.960005493010314 24.39914302299229 25.918229970100164 25.72262151389723 100-101 24.123366715326156 24.310848695503886 26.113698738397595 25.452085850772367 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 29.0 1 27.0 2 49.0 3 77.0 4 72.0 5 74.5 6 127.5 7 284.5 8 452.0 9 496.0 10 463.0 11 441.5 12 478.0 13 547.5 14 633.0 15 719.5 16 815.0 17 938.0 18 1075.5 19 1164.0 20 1242.5 21 1357.5 22 1448.0 23 1603.0 24 1748.5 25 1919.5 26 2251.5 27 2674.0 28 3201.5 29 3946.0 30 5161.5 31 7248.0 32 10957.5 33 15170.0 34 19805.0 35 26452.5 36 35390.0 37 44897.5 38 53966.0 39 62211.5 40 69678.5 41 77554.0 42 85995.0 43 95626.5 44 105561.0 45 115540.5 46 121852.5 47 127127.5 48 133746.5 49 137217.5 50 136934.5 51 136017.5 52 136470.0 53 136613.0 54 136840.0 55 132818.0 56 123352.5 57 111927.5 58 103080.5 59 91927.5 60 75391.5 61 61715.5 62 51039.5 63 39664.5 64 28964.5 65 21397.5 66 16122.0 67 12452.0 68 9600.5 69 7408.5 70 5786.0 71 4405.0 72 3228.5 73 2408.5 74 1905.0 75 1463.0 76 1064.0 77 723.5 78 474.5 79 338.0 80 258.5 81 190.0 82 153.5 83 121.0 84 100.5 85 90.5 86 74.5 87 55.0 88 46.0 89 34.5 90 27.5 91 24.5 92 20.0 93 22.0 94 21.0 95 14.5 96 11.5 97 11.5 98 10.0 99 5.5 100 7.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.05174262365024542 2 0.07241950054751697 3 0.06872119736263914 4 0.06915826955721562 5 0.0644849591690518 6 0.009850934846992792 7 0.012641472704673343 8 0.01563373619061996 9 0.005681938529494136 10-11 0.012389315669340765 12-13 0.020962654870648485 14-15 0.03715113653900012 16-17 0.02523251400228017 18-19 0.00975007203285976 20-21 0.019634627817896894 22-23 0.03387309507967658 24-25 0.03202394348723766 26-27 0.02015575235758423 28-29 0.011649655032365196 30-31 0.011397497997032616 32-33 0.008018593723576044 34-35 0.0051103825827402884 36-37 6.89229229909052E-4 38-39 0.003765545060966528 40-41 0.001311216583729416 42-43 0.22404993112750843 44-45 0.19515273487839474 46-47 0.20140622935464272 48-49 0.207979122742312 50-51 0.19957388823122596 52-53 0.20692006319391515 54-55 0.20307046578783775 56-57 0.2054575523889862 58-59 0.21441753237780387 60-61 0.21843523447410296 62-63 0.2041967672123233 64-65 0.20431444049547848 66-67 0.2017088177970418 68-69 0.19703550740887804 70-71 0.1890673450923685 72-73 0.20026311746113504 74-75 0.19948983588611516 76-77 0.19365660313542143 78-79 0.21134121654674637 80-81 0.22196543296875906 82-83 0.22097361529645093 84-85 0.21477055222726948 86-87 0.2344556114522329 88-89 0.22714305742758809 90-91 0.23388405550547903 92-93 0.2293452288694926 94-95 0.23267370173588264 96-97 0.2393138369996406 98-99 0.23297629017828175 100-101 0.23933064746866275 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 2974337.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 56.0182592569629 #Duplication Level Percentage of deduplicated Percentage of total 1 76.38239296084657 42.788086915479205 2 12.54218185210256 14.051823892781126 3 4.389153204059953 7.376181663106795 4 2.087405337060687 4.677312533833343 5 1.1646315549231372 3.2620316191262058 6 0.7179711951899135 2.413169793070805 7 0.53082648083243 2.0815182796612617 8 0.3595596701998978 1.611352545888476 9 0.2831470609387361 1.427526492076187 >10 1.4445413929846336 14.326127850970169 >50 0.07149025030362156 2.7051840389908492 >100 0.024774696528031458 2.3011780609936574 >500 0.001503393773423333 0.6069386945612636 >1k 4.2095025645560454E-4 0.37156761946082606 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 3.3620938044344E-5 2 0.0 0.0 0.0 0.0 6.7241876088688E-5 3 0.0 0.0 0.0 0.0 6.7241876088688E-5 4 0.0 0.0 0.0 0.0 6.7241876088688E-5 5 0.0 3.3620938044344E-5 0.0 0.0 6.7241876088688E-5 6 0.0 3.3620938044344E-5 0.0 0.0 6.7241876088688E-5 7 0.0 3.3620938044344E-5 0.0 3.3620938044344E-5 6.7241876088688E-5 8 0.0 3.3620938044344E-5 0.0 3.3620938044344E-5 1.34483752177376E-4 9 0.0 3.3620938044344E-5 0.0 3.3620938044344E-5 1.34483752177376E-4 10-11 0.0 3.3620938044344E-5 0.0 5.0431407066516E-5 1.34483752177376E-4 12-13 0.0 3.3620938044344E-5 0.0 1.00862814133032E-4 1.84915159243892E-4 14-15 0.0 5.0431407066516E-5 0.0 1.00862814133032E-4 2.5215703533258E-4 16-17 1.6810469022172E-5 1.00862814133032E-4 0.0 1.1767328315520399E-4 3.02588442399096E-4 18-19 3.3620938044344E-5 1.00862814133032E-4 0.0 1.34483752177376E-4 3.02588442399096E-4 20-21 3.3620938044344E-5 1.00862814133032E-4 0.0 1.51294221199548E-4 3.3620938044344E-4 22-23 3.3620938044344E-5 1.00862814133032E-4 0.0 2.68967504354752E-4 3.3620938044344E-4 24-25 3.3620938044344E-5 1.00862814133032E-4 0.0 3.1939891142126803E-4 3.3620938044344E-4 26-27 3.3620938044344E-5 1.00862814133032E-4 0.0 5.715559467538479E-4 3.3620938044344E-4 28-29 3.3620938044344E-5 1.00862814133032E-4 3.3620938044344E-5 0.0014457003359067918 3.3620938044344E-4 30-31 3.3620938044344E-5 1.00862814133032E-4 3.3620938044344E-5 0.006942723706157037 3.3620938044344E-4 32-33 3.3620938044344E-5 1.00862814133032E-4 3.3620938044344E-5 0.022979911153309125 3.3620938044344E-4 34-35 3.3620938044344E-5 1.00862814133032E-4 3.3620938044344E-5 0.04269859131631688 3.3620938044344E-4 36-37 3.3620938044344E-5 1.00862814133032E-4 3.3620938044344E-5 0.07734496797101337 3.3620938044344E-4 38-39 3.3620938044344E-5 1.00862814133032E-4 3.3620938044344E-5 0.1369548911236353 3.3620938044344E-4 40-41 3.3620938044344E-5 1.00862814133032E-4 3.3620938044344E-5 0.20584419317649616 3.3620938044344E-4 42-43 3.3620938044344E-5 1.00862814133032E-4 3.3620938044344E-5 0.28194518643986877 3.69830318487784E-4 44-45 3.3620938044344E-5 1.00862814133032E-4 3.3620938044344E-5 0.375108805760746 3.86640787509956E-4 46-47 3.3620938044344E-5 1.00862814133032E-4 3.3620938044344E-5 0.4861083327141478 4.202617255543E-4 48-49 3.3620938044344E-5 1.00862814133032E-4 3.3620938044344E-5 0.6001337440915404 4.37072194576472E-4 50-51 3.3620938044344E-5 1.00862814133032E-4 3.3620938044344E-5 0.7255566534659657 4.37072194576472E-4 52-53 3.3620938044344E-5 1.00862814133032E-4 3.3620938044344E-5 0.8560227035470426 4.53882663598644E-4 54-55 3.3620938044344E-5 1.00862814133032E-4 3.3620938044344E-5 1.0049802695525087 5.211245396873319E-4 56-57 5.0431407066516E-5 1.00862814133032E-4 3.3620938044344E-5 1.1782121528259912 5.37935008709504E-4 58-59 6.7241876088688E-5 1.00862814133032E-4 3.3620938044344E-5 1.3627406712823733 5.71555946753848E-4 60-61 6.7241876088688E-5 1.00862814133032E-4 3.3620938044344E-5 1.5610537743369362 6.05176884798192E-4 62-63 6.7241876088688E-5 1.00862814133032E-4 3.3620938044344E-5 1.7657716660889469 6.05176884798192E-4 64-65 6.7241876088688E-5 1.00862814133032E-4 3.3620938044344E-5 1.9915026441186727 6.387978228425361E-4 66-67 6.7241876088688E-5 1.00862814133032E-4 3.3620938044344E-5 2.252367502404738 6.387978228425361E-4 68-69 6.7241876088688E-5 1.00862814133032E-4 3.3620938044344E-5 2.544432591195954 6.387978228425361E-4 70-71 6.7241876088688E-5 1.00862814133032E-4 3.3620938044344E-5 2.8443313585515027 6.89229229909052E-4 72-73 6.7241876088688E-5 1.00862814133032E-4 3.3620938044344E-5 3.1692272933430203 7.73281575019912E-4 74-75 6.7241876088688E-5 1.00862814133032E-4 3.3620938044344E-5 3.512278534678485 7.73281575019912E-4 76-77 6.7241876088688E-5 1.00862814133032E-4 3.3620938044344E-5 3.894548600242676 7.90092044042084E-4 78-79 6.7241876088688E-5 1.00862814133032E-4 3.3620938044344E-5 4.323417285936328 8.06902513064256E-4 80-81 6.7241876088688E-5 1.00862814133032E-4 3.3620938044344E-5 4.76218733788404 8.405234511086E-4 82-83 6.7241876088688E-5 1.00862814133032E-4 3.3620938044344E-5 5.226240335241098 9.07765327197288E-4 84-85 6.7241876088688E-5 1.00862814133032E-4 3.3620938044344E-5 5.718568541493449 9.07765327197288E-4 86-87 6.7241876088688E-5 1.1767328315520399E-4 3.3620938044344E-5 6.240970676826466 9.41386265241632E-4 88-89 6.7241876088688E-5 1.34483752177376E-4 3.3620938044344E-5 6.797800652716891 9.41386265241632E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 2260 0.0 48.72063 1 GTATCAA 4495 0.0 45.507286 1 TCAACGC 5450 0.0 36.578842 4 CAACGCA 5615 0.0 35.501564 5 TATCAAC 5705 0.0 35.19286 2 ATCAACG 5800 0.0 34.370342 3 AACGCAG 6100 0.0 32.659115 6 GTACATG 9810 0.0 27.576502 1 ACGCAGA 7235 0.0 27.145958 7 TACATGG 10060 0.0 26.516012 2 CGCAGAG 7680 0.0 25.142345 8 ACATGGG 10500 0.0 24.545568 3 CATGGGG 9155 0.0 21.619959 4 GCAGAGT 8580 0.0 20.846539 9 GTACATA 1365 0.0 19.818716 1 GAGTACA 7100 0.0 19.251627 1 TAAGGTG 1845 0.0 18.779085 5 GTATAGT 610 0.0 18.673027 1 AGAGTAC 7235 0.0 18.459648 10-11 TAAGGTA 810 0.0 18.165773 4 >>END_MODULE