##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921703_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2974337 Sequences flagged as poor quality 0 Sequence length 101 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.361764991660326 33.0 31.0 34.0 28.0 34.0 2 31.49685358451312 34.0 31.0 34.0 28.0 34.0 3 31.568733469005025 34.0 31.0 34.0 28.0 34.0 4 35.051093067127226 37.0 35.0 37.0 32.0 37.0 5 34.79046153815119 37.0 35.0 37.0 32.0 37.0 6 34.76264256538516 37.0 35.0 37.0 32.0 37.0 7 34.650785368302245 37.0 35.0 37.0 32.0 37.0 8 34.59170934564577 37.0 35.0 37.0 32.0 37.0 9 36.17783963283246 39.0 37.0 39.0 32.0 39.0 10-11 36.06625711881337 39.0 37.0 39.0 32.0 39.0 12-13 35.988444147384776 39.0 37.0 39.0 31.0 39.0 14-15 37.225310043885415 40.0 38.0 41.0 31.0 41.0 16-17 37.19399684702843 40.0 38.0 41.0 31.0 41.0 18-19 37.148343479572084 40.0 38.0 41.0 31.0 41.0 20-21 37.08445882225182 40.0 38.0 41.0 31.0 41.0 22-23 36.993539736754784 40.0 37.5 41.0 31.0 41.0 24-25 36.90678510874861 40.0 37.0 41.0 30.0 41.0 26-27 36.77650077983766 40.0 37.0 41.0 30.0 41.0 28-29 36.65173986673332 40.0 37.0 41.0 30.0 41.0 30-31 36.4949834198344 40.0 37.0 41.0 30.0 41.0 32-33 36.45074515766034 40.0 36.5 41.0 30.0 41.0 34-35 36.58479587215571 40.0 37.0 41.0 30.0 41.0 36-37 36.578512959358676 40.0 37.0 41.0 30.0 41.0 38-39 36.473220418533614 40.0 37.0 41.0 30.0 41.0 40-41 36.384001880082856 40.0 37.0 41.0 30.0 41.0 42-43 36.26031297058807 40.0 36.0 41.0 29.0 41.0 44-45 36.12443680726159 40.0 36.0 41.0 28.5 41.0 46-47 35.96156336689488 40.0 36.0 41.0 28.0 41.0 48-49 35.80682686595365 40.0 35.0 41.0 28.0 41.0 50-51 35.63753064968765 39.5 35.0 41.0 27.0 41.0 52-53 35.45531441124526 39.0 35.0 41.0 27.0 41.0 54-55 35.22863885296118 39.0 35.0 41.0 26.0 41.0 56-57 34.98771591786674 39.0 35.0 41.0 26.0 41.0 58-59 34.72860455960438 38.0 35.0 40.0 26.0 41.0 60-61 34.43490599753828 38.0 34.0 40.0 26.0 41.0 62-63 34.11629986783609 37.0 34.0 40.0 25.0 41.0 64-65 33.76651973196043 36.5 34.0 39.5 24.0 41.0 66-67 33.404422061118154 36.0 34.0 39.0 23.0 41.0 68-69 33.034171144695435 35.5 33.0 39.0 22.5 40.5 70-71 32.633157238066836 35.0 33.0 38.0 22.0 40.0 72-73 32.27441981187741 35.0 33.0 37.0 21.5 39.5 74-75 31.881079380043353 35.0 33.0 37.0 20.0 39.0 76-77 29.21601267778332 33.0 28.5 34.5 13.5 36.0 78-79 30.787036909401994 34.5 31.5 35.0 17.5 37.0 80-81 30.983202138829597 35.0 32.0 35.0 18.0 37.0 82-83 30.82608846946395 35.0 32.0 35.0 17.5 36.5 84-85 30.654681866916896 35.0 32.0 35.0 16.0 36.0 86-87 30.464283805096734 35.0 32.0 35.0 11.0 36.0 88-89 30.213941459895096 35.0 32.0 35.0 7.0 35.5 90-91 30.031133997257207 34.0 31.0 35.0 2.0 35.0 92-93 29.884895524616077 34.0 31.0 35.0 2.0 35.0 94-95 29.793656535893547 34.0 31.0 35.0 2.0 35.0 96-97 29.596068972681977 34.0 31.0 35.0 2.0 35.0 98-99 29.400010489732672 34.0 31.0 35.0 2.0 35.0 100-101 28.29034470539149 33.0 29.0 34.5 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 56254.0 3 19288.0 4 10456.0 5 7589.0 6 6524.0 7 6544.0 8 6890.0 9 7485.0 10 8173.0 11 8596.0 12 9355.0 13 10027.0 14 10529.0 15 11211.0 16 12156.0 17 12932.0 18 12196.0 19 11248.0 20 10633.0 21 10637.0 22 11299.0 23 12684.0 24 15288.0 25 18141.0 26 22180.0 27 26614.0 28 31962.0 29 39184.0 30 47353.0 31 59354.0 32 75887.0 33 99821.0 34 144305.0 35 218401.0 36 388455.0 37 741660.0 38 704398.0 39 68628.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.057121795374776 18.944790986486936 13.751790286368365 26.246296931769926 2 15.240758665741863 20.671634289034124 37.20882068447753 26.87878636074648 3 18.082846762574203 24.492131087458326 28.367526382418557 29.057495767548915 4 13.50797754391911 16.66809564109004 34.54826419955073 35.27566261544012 5 14.873808818400988 36.88537518037761 33.505087901189896 14.735728100031512 6 34.27949139857323 34.74962293319311 16.693922617754787 14.276963050478871 7 29.847492062937054 31.141965419520385 20.428922479194522 18.581620038348042 8 27.297915468220314 34.21364156112774 19.385328562298085 19.10311440835386 9 27.11065595817016 15.728451661143867 18.62842664715755 38.532465733528426 10-11 26.136020966200363 24.958328785420534 27.188619616946053 21.717030631433055 12-13 26.78285079617077 22.216781221858163 27.01589483751049 23.984473144460576 14-15 23.923104247735154 23.61621587726617 24.17691967459578 28.283760200402895 16-17 24.310375724068926 26.76757879150883 24.92856391189028 23.993481572531962 18-19 24.353614970153394 26.076714404085816 26.164600880579457 23.405069745181333 20-21 24.91182463537568 25.227946408744025 25.97920841628623 23.881020539594065 22-23 24.78112345391989 24.991825908063866 25.79608931269209 24.43096132532415 24-25 24.560677115772453 25.27093994378214 25.6903465210469 24.478036419398506 26-27 24.35356707515421 25.419309546948497 25.787837631790982 24.439285746106307 28-29 24.534240065012472 25.60748719360863 25.55570853794728 24.302564203431615 30-31 24.76702907895405 25.382338630249013 25.33610256537864 24.514529725418303 32-33 24.470893110707692 25.438455209294087 25.319374005765262 24.771277674232966 34-35 24.734441793565072 25.430963104208697 25.44400921903031 24.390585883195914 36-37 24.874749136835707 25.348535470176998 25.377265585625324 24.399449807361968 38-39 24.736273115029185 25.41284417549931 25.342458729871353 24.508423979600156 40-41 24.877868041672464 25.251307728153932 25.4237718383373 24.44705239183631 42-43 24.74258192439745 25.260511497273246 25.224231040939753 24.77267553738955 44-45 24.604685654128673 25.229895695214772 25.425146694627877 24.740271956028682 46-47 24.820928803228796 25.31266853067477 25.20512830858076 24.661274357515676 48-49 24.521961252542386 25.37647789450112 25.256844219672715 24.844716633283785 50-51 24.618774473553305 25.42432033013965 25.261220745419905 24.695684450887136 52-53 24.910801762043445 25.217784239111797 25.261240221983584 24.610173776861178 54-55 24.407632415879316 25.132816826255315 25.48375046945255 24.97580028841282 56-57 24.466951909417215 25.21459613493271 25.434479628119668 24.883972327530408 58-59 24.600013450577535 25.13045378885956 25.383896296047208 24.885636464515695 60-61 24.527085413787656 25.134510828449518 25.531150495442333 24.80725326232049 62-63 24.60268686063308 25.175812503877754 25.452539073041656 24.768961562447508 64-65 24.312372650701857 25.037990368373713 25.451158748278747 25.198478232645684 66-67 24.341172946212115 25.292032209789866 25.341820701213713 25.024974142784313 68-69 24.49597391335353 25.10986046442788 25.316782279163984 25.077383343054606 70-71 24.327492718716893 24.969981634042053 25.350943210870064 25.35158243637099 72-73 24.305111212643173 25.126663304561493 25.247554472073535 25.320671010721796 74-75 24.256147881075137 25.17425028783183 25.29298144340159 25.27662038769144 76-77 24.164779357527507 24.874740070271585 25.52537732984817 25.435103242352735 78-79 24.095631276389266 24.955128990272733 25.50263270176308 25.446607031574924 80-81 24.31267570000767 25.050178374617648 25.271212180342058 25.365933745032628 82-83 24.14462984461451 25.054817407587265 25.401999927358528 25.398552820439697 84-85 24.00899080349924 25.096024290777546 25.41464480389045 25.48034010183276 86-87 23.950998661991093 25.141883783311865 25.33461156864638 25.572505986050658 88-89 23.882763601835137 24.955676060621794 25.40564244254073 25.75591789500234 90-91 23.73889596850692 25.00548815586835 25.441488839738092 25.814127035886635 92-93 23.78145120843213 24.877212504360337 25.550950125116934 25.790386162090595 94-95 23.558335202259254 24.78990975021175 25.62413439589197 26.02762065163703 96-97 23.55419073686759 24.712855672945654 25.60929272278526 26.123660867401494 98-99 23.33798762471775 24.65995543176986 25.56781122113454 26.434245722377852 100-101 23.305786513265172 24.603339239425353 25.678724284124492 26.412149963184987 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 36.0 1 28.0 2 37.5 3 55.0 4 52.5 5 55.0 6 94.5 7 243.5 8 407.5 9 434.0 10 367.5 11 329.0 12 340.5 13 339.5 14 358.5 15 400.5 16 448.0 17 517.0 18 609.0 19 677.0 20 720.0 21 814.5 22 968.5 23 1181.5 24 1388.0 25 1629.0 26 2026.5 27 2527.5 28 3158.0 29 4069.0 30 5582.0 31 8086.5 32 12420.0 33 17198.5 34 22226.5 35 28941.5 36 37266.5 37 45795.5 38 54416.0 39 62547.5 40 69963.0 41 78074.0 42 86343.0 43 95873.0 44 105513.5 45 115072.0 46 121866.0 47 127609.0 48 134264.0 49 137724.5 50 137760.5 51 137089.5 52 137677.0 53 138044.0 54 137564.0 55 132968.0 56 123482.5 57 111690.5 58 102284.0 59 91120.5 60 74505.5 61 60422.5 62 49872.0 63 38501.5 64 27799.5 65 20416.0 66 15276.0 67 11783.5 68 9083.5 69 6985.0 70 5400.5 71 3926.0 72 2773.5 73 2096.0 74 1589.5 75 1148.0 76 791.0 77 476.5 78 284.5 79 178.5 80 102.0 81 53.0 82 35.5 83 21.0 84 14.0 85 13.5 86 9.0 87 8.0 88 6.0 89 3.0 90 2.0 91 1.0 92 0.5 93 0.0 94 0.5 95 0.5 96 0.0 97 0.0 98 0.5 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.16272534013462495 2 3.3620938044344E-4 3 0.009817313908948447 4 0.0059172850958045435 5 0.024005349763661615 6 0.002118119096793672 7 0.0 8 0.0 9 3.3620938044344004E-5 10-11 0.04577490714737436 12-13 2.1853609728823598E-4 14-15 0.004320290538698204 16-17 0.0 18-19 0.0015297526810176519 20-21 2.8577797337692396E-4 22-23 1.6810469022172002E-5 24-25 5.21124539687332E-4 26-27 0.00243751800821494 28-29 0.004656499919141644 30-31 0.01573459900475299 32-33 0.010624216422012705 34-35 0.009128084679039396 36-37 0.003563819432700464 38-39 1.6810469022172002E-5 40-41 0.00319398911421268 42-43 0.009548346404593696 44-45 0.0072789330866004755 46-47 0.003395714742478744 48-49 0.008674202015440752 50-51 0.002706485512569692 52-53 0.002118119096793672 54-55 0.0043034800696760325 56-57 0.008808685767618127 58-59 0.01637339682759553 60-61 0.007631952936066088 62-63 0.021635073631535363 64-65 0.04084943972387796 66-67 0.0592569033031563 68-69 0.0495908836154074 70-71 0.06690566670824456 72-73 0.03367136945141052 74-75 0.0273170121610295 76-77 0.22552925240145955 78-79 0.08354803104019484 80-81 0.06525824074407172 82-83 0.027871757638761173 84-85 0.05115425723446939 86-87 0.06757808546913144 88-89 0.2915271537825068 90-91 0.29788151107288785 92-93 0.05103658395131419 94-95 0.008674202015440752 96-97 0.013347512403604569 98-99 7.06039698931224E-4 100-101 2.35346566310408E-4 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 2974337.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 55.462953284648854 #Duplication Level Percentage of deduplicated Percentage of total 1 75.75700677581015 42.01707327791585 2 12.88848504239731 14.296668876327551 3 4.5560286972671795 7.580724204001475 4 2.12198721203032 4.7076671044583955 5 1.1810939853445386 3.275348026697194 6 0.7224584833229287 2.4041808666382716 7 0.5161564116535582 2.0039291262979297 8 0.38623859320077575 1.7137546441138494 9 0.272910535948614 1.3622781875585812 >10 1.495945965319332 14.612916907234224 >50 0.07542504104715235 2.8276009730725202 >100 0.024316894792026898 2.2464048799378973 >500 0.0015205952080754466 0.5866798267273186 >1k 4.2576665813898103E-4 0.36477309901881305 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 3.3620938044344E-5 2 0.0 0.0 0.0 0.0 3.3620938044344E-5 3 0.0 0.0 0.0 0.0 3.3620938044344E-5 4 0.0 0.0 0.0 3.3620938044344E-5 3.3620938044344E-5 5 0.0 0.0 0.0 3.3620938044344E-5 3.3620938044344E-5 6 0.0 0.0 0.0 3.3620938044344E-5 3.3620938044344E-5 7 0.0 0.0 0.0 3.3620938044344E-5 3.3620938044344E-5 8 0.0 0.0 0.0 3.3620938044344E-5 6.7241876088688E-5 9 0.0 0.0 0.0 6.7241876088688E-5 6.7241876088688E-5 10-11 0.0 0.0 0.0 8.405234511085999E-5 6.7241876088688E-5 12-13 0.0 0.0 0.0 1.00862814133032E-4 6.7241876088688E-5 14-15 0.0 0.0 0.0 1.00862814133032E-4 6.7241876088688E-5 16-17 0.0 0.0 0.0 1.1767328315520399E-4 6.7241876088688E-5 18-19 0.0 0.0 0.0 1.34483752177376E-4 6.7241876088688E-5 20-21 0.0 0.0 0.0 1.34483752177376E-4 8.405234511085999E-5 22-23 0.0 0.0 0.0 2.01725628266064E-4 1.00862814133032E-4 24-25 0.0 0.0 0.0 3.02588442399096E-4 1.00862814133032E-4 26-27 0.0 0.0 0.0 5.379350087095041E-4 1.00862814133032E-4 28-29 0.0 0.0 0.0 0.001445700335906792 1.00862814133032E-4 30-31 0.0 0.0 0.0 0.007043586520290068 1.1767328315520399E-4 32-33 0.0 0.0 0.0 0.023416983347885598 1.34483752177376E-4 34-35 0.0 0.0 0.0 0.0432869577320929 1.51294221199548E-4 36-37 0.0 0.0 0.0 0.07798376579385591 1.6810469022172E-4 38-39 0.0 0.0 0.0 0.13774498316767736 1.6810469022172E-4 40-41 0.0 0.0 0.0 0.2076597238308907 1.6810469022172E-4 42-43 0.0 0.0 0.0 0.28330683443066473 1.6810469022172E-4 44-45 0.0 0.0 0.0 0.37605019202598766 1.84915159243892E-4 46-47 0.0 0.0 0.0 0.4870497189793893 2.18536097288236E-4 48-49 0.0 0.0 0.0 0.6010246989497154 2.35346566310408E-4 50-51 0.0 0.0 0.0 0.7261282094127195 2.35346566310408E-4 52-53 0.0 0.0 0.0 0.8575692666970824 2.6896750435475203E-4 54-55 0.0 0.0 0.0 1.005988897693839 3.02588442399096E-4 56-57 0.0 0.0 0.0 1.1792039704982993 3.02588442399096E-4 58-59 0.0 0.0 0.0 1.3635980052025038 3.1939891142126803E-4 60-61 0.0 3.3620938044344E-5 0.0 1.5615580884076015 3.69830318487784E-4 62-63 0.0 3.3620938044344E-5 0.0 1.7666121895400555 4.03451256532128E-4 64-65 0.0 3.3620938044344E-5 0.0 1.9925448931980472 4.03451256532128E-4 66-67 0.0 3.3620938044344E-5 0.0 2.2524851756878927 4.202617255543E-4 68-69 0.0 3.3620938044344E-5 0.0 2.5429028385149364 4.53882663598644E-4 70-71 0.0 3.3620938044344E-5 0.0 2.8416584939769773 4.70693132620816E-4 72-73 0.0 3.3620938044344E-5 0.0 3.16682339627285 5.0431407066516E-4 74-75 0.0 3.3620938044344E-5 0.0 3.510731971528445 5.0431407066516E-4 76-77 0.0 3.3620938044344E-5 0.0 3.8943132536763656 5.0431407066516E-4 78-79 0.0 3.3620938044344E-5 0.0 4.324543587360814 5.0431407066516E-4 80-81 0.0 3.3620938044344E-5 0.0 4.765196411839009 5.54745477731676E-4 82-83 0.0 3.3620938044344E-5 0.0 5.22997225936402 6.387978228425361E-4 84-85 0.0 3.3620938044344E-5 0.0 5.724115996270765 6.387978228425361E-4 86-87 0.0 3.3620938044344E-5 0.0 6.247560380683157 6.55608291864708E-4 88-89 0.0 3.3620938044344E-5 0.0 6.807147273493219 7.06039698931224E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 4260 0.0 45.75873 1 GGTATCA 2210 0.0 45.39311 1 TCAACGC 5465 0.0 35.000668 4 TATCAAC 5575 0.0 34.396366 2 CAACGCA 5600 0.0 34.18392 5 ATCAACG 5775 0.0 33.286777 3 AACGCAG 6125 0.0 31.402632 6 GTACATG 9175 0.0 27.257088 1 TACATGG 9635 0.0 25.41991 2 ACGCAGA 7420 0.0 25.153502 7 CGCAGAG 7685 0.0 23.791765 8 ACATGGG 10295 0.0 22.63726 3 GCAGAGT 8700 0.0 20.25218 9 CATGGGG 8750 0.0 20.23309 4 TAAGGTG 1840 0.0 18.329279 5 AGAGTAC 7425 0.0 18.325056 10-11 GTATATG 870 0.0 16.941122 1 TAAGGTA 765 0.0 16.751888 4 CAGAGTA 8190 0.0 16.236456 10-11 GTATTAG 710 0.0 16.07136 1 >>END_MODULE