##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921701_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3505354 Sequences flagged as poor quality 0 Sequence length 101 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.59449944285228 31.0 31.0 34.0 27.0 34.0 2 30.650532870574555 33.0 31.0 34.0 27.0 34.0 3 30.71622295494264 33.0 31.0 34.0 27.0 34.0 4 34.174843681979056 37.0 35.0 37.0 30.0 37.0 5 34.16938717173786 37.0 35.0 37.0 30.0 37.0 6 34.217075365284074 37.0 35.0 37.0 30.0 37.0 7 34.13947863753561 37.0 35.0 37.0 30.0 37.0 8 34.10807210912222 37.0 35.0 37.0 30.0 37.0 9 35.68570877577557 39.0 37.0 39.0 30.0 39.0 10-11 35.59067486479255 39.0 37.0 39.0 30.0 39.0 12-13 35.48674299371761 39.0 37.0 39.0 30.0 39.0 14-15 36.6450625243556 40.0 37.0 41.0 30.0 41.0 16-17 36.58540164559699 40.0 37.0 41.0 30.0 41.0 18-19 36.54294430747936 40.0 37.0 41.0 29.0 41.0 20-21 36.46796158105572 40.0 37.0 41.0 29.0 41.0 22-23 36.366649559502406 40.0 37.0 41.0 29.0 41.0 24-25 36.25463690685734 40.0 36.5 41.0 28.0 41.0 26-27 36.11381375461651 40.0 36.0 41.0 27.0 41.0 28-29 35.974396166549795 40.0 36.0 41.0 27.0 41.0 30-31 35.83503634725622 40.0 36.0 41.0 27.0 41.0 32-33 35.66403122195362 40.0 36.0 41.0 26.5 41.0 34-35 35.49650177984877 39.0 35.0 41.0 25.5 41.0 36-37 35.47307304768648 39.0 35.0 41.0 25.5 41.0 38-39 35.666881433373064 40.0 35.5 41.0 26.5 41.0 40-41 35.73299201735402 40.0 36.0 41.0 26.5 41.0 42-43 35.57655931469404 40.0 35.0 41.0 26.0 41.0 44-45 35.4609042339233 40.0 35.0 41.0 25.0 41.0 46-47 35.30865256404917 40.0 35.0 41.0 24.5 41.0 48-49 35.14232328603616 39.5 35.0 41.0 24.0 41.0 50-51 33.42196950721667 37.0 32.5 39.5 22.0 40.0 52-53 33.53917920986012 37.5 33.5 39.5 21.5 40.0 54-55 34.456126685065186 39.0 34.0 40.5 23.0 41.0 56-57 34.46895991103894 39.0 34.0 41.0 23.0 41.0 58-59 34.26690585316062 38.0 34.0 41.0 22.0 41.0 60-61 34.00251829059205 38.0 34.0 40.0 22.0 41.0 62-63 33.69701134321954 37.0 34.0 40.0 20.5 41.0 64-65 33.39166857327391 37.0 34.0 40.0 20.0 41.0 66-67 33.034947112331594 36.0 33.0 39.0 19.0 41.0 68-69 32.659451513313634 36.0 33.0 39.0 18.0 41.0 70-71 32.24061079137799 35.0 33.0 38.5 14.0 40.0 72-73 31.873059040541982 35.0 32.5 37.0 12.0 39.5 74-75 31.47381990520786 35.0 32.0 37.0 7.5 39.0 76-77 31.099962086568148 35.0 32.0 36.0 6.5 39.0 78-79 30.767730876824423 35.0 32.0 36.0 2.0 37.5 80-81 30.466627621632508 35.0 31.5 35.5 2.0 37.0 82-83 30.1779396603025 35.0 31.0 35.0 2.0 36.5 84-85 29.940357664304376 35.0 31.0 35.0 2.0 36.0 86-87 29.731898975110646 35.0 31.0 35.0 2.0 36.0 88-89 29.53169280477806 35.0 31.0 35.0 2.0 35.5 90-91 29.331918830451933 34.5 31.0 35.0 2.0 35.0 92-93 29.158684258422973 34.0 31.0 35.0 2.0 35.0 94-95 28.94907775363059 34.0 30.0 35.0 2.0 35.0 96-97 28.73107409408579 34.0 30.0 35.0 2.0 35.0 98-99 28.477470891670286 34.0 30.0 35.0 2.0 35.0 100-101 27.40606426626241 33.5 27.5 35.0 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 101682.0 3 18296.0 4 13190.0 5 10153.0 6 9369.0 7 9657.0 8 10291.0 9 11032.0 10 11935.0 11 12685.0 12 12956.0 13 12845.0 14 13663.0 15 14230.0 16 14247.0 17 14925.0 18 14386.0 19 13901.0 20 14243.0 21 15076.0 22 16048.0 23 18674.0 24 21830.0 25 26402.0 26 31215.0 27 37116.0 28 44021.0 29 51753.0 30 62665.0 31 76498.0 32 95082.0 33 123289.0 34 171109.0 35 253254.0 36 430292.0 37 788240.0 38 803290.0 39 105803.0 40 11.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.91249933280224 17.079092405534073 12.565638701637438 25.442769560026246 2 16.54916810792015 19.263958651774697 37.907659665096276 26.279213575208882 3 19.887914319058506 22.70946907323624 28.35292115919124 29.04969544851401 4 13.88965651121363 15.349226921847164 35.444776869318964 35.31633969762024 5 15.296069581283072 36.07153959836267 33.63035400117214 15.002036819182127 6 34.7003843092277 33.89781425909917 16.962273786801106 14.439527644872024 7 30.36069302546404 30.40591589288486 20.250257927269075 18.983133154382024 8 27.538689403672876 33.212355386414686 19.701401318374295 19.547553891538136 9 27.027457281477503 15.55024401210332 18.61173574684593 38.81056295957325 10-11 26.18959442972851 24.555492722742954 27.31156908686487 21.943343760663666 12-13 27.021681056596968 21.78687665749569 26.909911560281625 24.281530725625718 14-15 24.083231495534452 23.33214800033562 24.15196844236399 28.432652061765936 16-17 24.531369470804663 26.262756690793097 24.917699574518963 24.288174263883278 18-19 24.440958626052446 25.835011771056482 25.920304319934218 23.803725282956854 20-21 25.003923376877584 25.159503103605115 25.7962029701247 24.040370549392602 22-23 24.866714468666505 24.890858045897055 25.580947692483313 24.661479792953127 24-25 24.69897440046368 25.01532827332655 25.624249906289563 24.661447419920208 26-27 24.518687395406367 25.22316874653138 25.569495824814855 24.6886480332474 28-29 24.675581268949927 25.336216294560764 25.403349709169376 24.584852727319934 30-31 24.889966725749563 25.19429237830647 25.236660877256178 24.679080018687788 32-33 24.61833111892012 25.263967849972623 25.244852666154454 24.872848364952794 34-35 24.954752731953587 25.20493931274364 25.26532130695564 24.57498664834713 36-37 24.959301316322307 25.05708085776122 25.321049959711406 24.662567866205066 38-39 24.76495829516417 25.242744482600138 25.31346739399908 24.678829828236616 40-41 24.99501828151609 25.030735455699936 25.40722071744449 24.567025545339487 42-43 24.85447514832712 24.997733881319434 25.26480704821529 24.882983922138163 44-45 24.76835166895853 25.070789077207156 25.366208679810686 24.794650574023628 46-47 24.912936809647935 25.044982410119516 25.213848693294576 24.828232086937977 48-49 24.685683474052446 25.070645455304387 25.27870790005455 24.964963170588618 50-51 24.70098753407785 25.197920616776777 25.347046281270757 24.75404556787462 52-53 24.985544387984767 24.991905572011248 25.30940727630825 24.713142763695735 54-55 24.57573951750738 24.92039956665917 25.57078245635752 24.93307845947593 56-57 24.611268461692624 25.038087671544613 25.51912588615124 24.831517980611522 58-59 24.70896824272444 24.913170456668716 25.447392840656658 24.930468459950188 60-61 24.580809507579485 24.960970292817162 25.621458733161468 24.836761466441885 62-63 24.592490393502604 25.01686014981019 25.543219875507912 24.8474295811793 64-65 24.51872847545045 24.838878119715126 25.49115603939569 25.151237365438732 66-67 24.481597013818124 24.97350969995956 25.495539781047828 25.049353505174487 68-69 24.579230117681497 24.847813328736645 25.51561944799154 25.05733710559032 70-71 24.46710808018847 24.717175395559988 25.589602619211092 25.22611390504045 72-73 24.44631438236851 24.760233348051113 25.613940849387934 25.17951142019244 74-75 24.410561017611986 24.899444608344254 25.499818185560503 25.190176188483253 76-77 24.39035092295451 24.64357366363439 25.64148593739794 25.32458947601316 78-79 24.330659100418753 24.71052969024672 25.669448114778014 25.28936309455651 80-81 24.43841365009396 24.76329878795712 25.61893163629792 25.179355925651 82-83 24.3837855751368 24.699659535507728 25.707728375272104 25.20882651408337 84-85 24.279632951871932 24.740108601344886 25.723076148891032 25.25718229789215 86-87 24.247146315411683 24.77731751503877 25.719852035935766 25.25568413361378 88-89 24.191820428782442 24.58046322870346 25.763949326881026 25.46376701563307 90-91 24.13719341743844 24.616958575160538 25.836210951966287 25.40963705543473 92-93 24.184544940982285 24.472252101361796 25.955898532968007 25.387304424687912 94-95 24.072401942595768 24.37951967010474 25.997110270835254 25.550968116464233 96-97 24.083799280509492 24.307885768084283 26.061940588124433 25.54637436328179 98-99 23.99094957407405 24.17441458774921 26.029654672259504 25.80498116591723 100-101 24.110414490471932 24.11807898576992 26.200948481293125 25.57055804246502 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 25.0 1 21.5 2 49.5 3 80.0 4 70.0 5 78.5 6 120.5 7 218.0 8 353.5 9 422.0 10 393.5 11 380.0 12 443.5 13 501.0 14 577.5 15 714.0 16 839.0 17 927.0 18 1067.5 19 1220.5 20 1271.0 21 1356.0 22 1455.0 23 1492.0 24 1639.5 25 1861.5 26 2056.5 27 2369.5 28 2810.5 29 3397.5 30 4197.5 31 5383.0 32 7787.5 33 10942.0 34 15186.0 35 22142.5 36 32124.5 37 43997.5 38 56679.5 39 69610.0 40 82329.0 41 95425.0 42 108391.5 43 120702.0 44 131975.5 45 142487.5 46 152089.5 47 160543.5 48 167655.5 49 172312.5 50 172346.5 51 170877.5 52 169687.5 53 167296.5 54 163953.5 55 155706.0 56 143222.0 57 128813.0 58 116634.0 59 102647.5 60 84450.0 61 69713.0 62 57468.5 63 44455.0 64 32156.0 65 23481.5 66 17757.0 67 13611.5 68 10425.0 69 7935.5 70 5945.0 71 4345.5 72 3183.0 73 2383.0 74 1819.0 75 1349.5 76 954.0 77 616.0 78 400.0 79 276.5 80 208.0 81 177.5 82 150.5 83 118.0 84 99.5 85 79.5 86 63.0 87 65.5 88 57.5 89 42.5 90 38.0 91 31.5 92 26.5 93 25.5 94 21.0 95 17.0 96 15.0 97 11.5 98 13.0 99 11.5 100 8.5 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.05406016054298653 2 0.07462869655960568 3 0.07126241743344609 4 0.07057775049253227 5 0.06684061010671105 6 0.010384115270526172 7 0.013978616710323693 8 0.01663170110636472 9 0.005705557840948446 10-11 0.013179838612590911 12-13 0.02339278714788863 14-15 0.040395349513915 16-17 0.02760063605558811 18-19 0.01022721242990009 20-21 0.02054000822741441 22-23 0.037556834488043145 24-25 0.034475833253930985 26-27 0.02051148043820966 28-29 0.011211421157463696 30-31 0.011168629473656584 32-33 0.008187475501761021 34-35 0.004849724164806179 36-37 5.562918894924736E-4 38-39 0.003565973650592779 40-41 0.0010697920951778337 42-43 0.23349995464081516 44-45 0.20281831735111489 46-47 0.20882341697871315 48-49 0.21698236469126939 50-51 0.20818154172160647 52-53 0.21616932269893424 54-55 0.21151929305856126 56-57 0.21404400240318094 58-59 0.22367213125978144 60-61 0.22873581384362324 62-63 0.2128458352565818 64-65 0.21277451578356993 66-67 0.2104067092795763 68-69 0.20491510985766345 70-71 0.1967276343559024 72-73 0.20875209750570128 74-75 0.20773936098893295 76-77 0.2011351777880351 78-79 0.22010615760918867 80-81 0.2315885927640974 82-83 0.23030484224988404 84-85 0.22489882619558538 86-87 0.24416934780338875 88-89 0.2371372477644198 90-91 0.24359879201929394 92-93 0.2395050542684134 94-95 0.24210108308604494 96-97 0.24856262734091905 98-99 0.24254326381871844 100-101 0.24851983565711194 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 3505354.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 59.49398447188248 #Duplication Level Percentage of deduplicated Percentage of total 1 76.67976946040648 45.61985013584952 2 12.767953423030393 15.192328453749775 3 4.419834202237846 7.888606421887006 4 2.0457784333250277 4.8684604138060505 5 1.105784167842871 3.289375305544863 6 0.7040174571702653 2.5130882198893167 7 0.45459240164045545 1.8931859298963116 8 0.33414571243761365 1.5903727861687595 9 0.2388462642795261 1.2788924344391936 >10 1.1871274986230123 12.148534438689614 >50 0.0493032071420023 1.9580999568325936 >100 0.011742272152825141 1.1373589443964365 >500 8.651736896635575E-4 0.3684296465408063 >1k 2.403260220513668E-4 0.25341691230978414 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 2.852778920474223E-5 3 0.0 0.0 0.0 0.0 2.852778920474223E-5 4 0.0 0.0 0.0 0.0 2.852778920474223E-5 5 0.0 0.0 0.0 0.0 2.852778920474223E-5 6 0.0 0.0 0.0 0.0 8.55833676142267E-5 7 0.0 0.0 0.0 0.0 8.55833676142267E-5 8 0.0 0.0 0.0 0.0 8.55833676142267E-5 9 0.0 0.0 0.0 0.0 2.2822231363793784E-4 10-11 0.0 0.0 0.0 2.852778920474223E-5 2.2822231363793784E-4 12-13 0.0 0.0 0.0 5.705557840948446E-5 2.2822231363793784E-4 14-15 0.0 0.0 0.0 7.131947301185558E-5 3.1380568125216455E-4 16-17 0.0 0.0 0.0 8.55833676142267E-5 3.70861259661649E-4 18-19 0.0 2.852778920474223E-5 0.0 8.55833676142267E-5 4.1365294346876235E-4 20-21 0.0 2.852778920474223E-5 0.0 8.55833676142267E-5 4.8497241648061797E-4 22-23 0.0 4.279168380711335E-5 0.0 1.4263894602371116E-4 5.562918894924736E-4 24-25 0.0 5.705557840948446E-5 0.0 3.2806957585453567E-4 6.418752571067002E-4 26-27 0.0 5.705557840948446E-5 0.0 6.418752571067002E-4 6.846669409138136E-4 28-29 0.0 5.705557840948446E-5 0.0 0.0021681119795604097 6.846669409138136E-4 30-31 0.0 5.705557840948446E-5 0.0 0.008857878548072464 6.846669409138136E-4 32-33 0.0 5.705557840948446E-5 0.0 0.025646482495063266 7.41722519323298E-4 34-35 0.0 5.705557840948446E-5 0.0 0.051435603936150244 7.845142031304114E-4 36-37 0.0 5.705557840948446E-5 0.0 0.0939277459566138 8.130419923351535E-4 38-39 0.0 8.55833676142267E-5 0.0 0.16402052403266545 8.273058869375247E-4 40-41 0.0 8.55833676142267E-5 0.0 0.24743577966733174 8.273058869375247E-4 42-43 0.0 8.55833676142267E-5 0.0 0.3372840517676674 8.70097570744638E-4 44-45 0.0 8.55833676142267E-5 0.0 0.4510243473269747 8.843614653470091E-4 46-47 0.0 8.55833676142267E-5 0.0 0.5839781089156759 8.843614653470091E-4 48-49 0.0 8.55833676142267E-5 0.0 0.7244917346436337 8.843614653470091E-4 50-51 1.4263894602371115E-5 8.55833676142267E-5 0.0 0.8761597259506457 9.128892545517514E-4 52-53 2.852778920474223E-5 8.55833676142267E-5 0.0 1.0340753030934964 9.556809383588648E-4 54-55 2.852778920474223E-5 1.5690284062608228E-4 0.0 1.2147417921271288 0.0010127365167683492 56-57 2.852778920474223E-5 1.9969452443319562E-4 0.0 1.4260899184504616 0.0010270004113707204 58-59 2.852778920474223E-5 1.9969452443319562E-4 0.0 1.6526148286307176 0.0010270004113707204 60-61 2.852778920474223E-5 1.9969452443319562E-4 0.0 1.8898804514465586 0.0010412643059730916 62-63 2.852778920474223E-5 1.9969452443319562E-4 0.0 2.136717147540591 0.0010840559897802048 64-65 2.852778920474223E-5 1.9969452443319562E-4 0.0 2.4068753113095 0.0010840559897802048 66-67 2.852778920474223E-5 1.9969452443319562E-4 0.0 2.7265719810324436 0.001112583778984947 68-69 2.852778920474223E-5 1.9969452443319562E-4 0.0 3.0728137586104 0.001112583778984947 70-71 2.852778920474223E-5 2.1395841903556673E-4 0.0 3.434303639518291 0.0011268476735873181 72-73 4.279168380711335E-5 2.2822231363793784E-4 0.0 3.8148072919311433 0.0011981671465991738 74-75 5.705557840948446E-5 2.2822231363793784E-4 0.0 4.215037910579074 0.0012266949358039159 76-77 5.705557840948446E-5 2.2822231363793784E-4 0.0 4.663951201504898 0.0012980144088157715 78-79 5.705557840948446E-5 2.852778920474223E-4 0.0 5.15370202267731 0.0013122783034181427 80-81 5.705557840948446E-5 2.852778920474223E-4 0.0 5.666004061216071 0.001355069987225256 82-83 5.705557840948446E-5 2.852778920474223E-4 0.0 6.199216969241908 0.0014406533548394827 84-85 5.705557840948446E-5 2.852778920474223E-4 0.0 6.764209834441829 0.001454917249441854 86-87 5.705557840948446E-5 3.1380568125216455E-4 0.0 7.361524684810721 0.0014977089332489672 88-89 5.705557840948446E-5 3.1380568125216455E-4 0.0 8.007878804822566 0.0015405006170560805 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 2220 0.0 43.611298 1 GTATCAA 3850 0.0 42.65178 1 TCAACGC 4695 0.0 34.268753 4 CAACGCA 4835 0.0 33.07733 5 ATCAACG 4900 0.0 32.836937 3 TATCAAC 5175 0.0 31.367126 2 AACGCAG 5265 0.0 30.722805 6 GTACATG 9185 0.0 28.108751 1 TACATGG 9590 0.0 26.231085 2 ACGCAGA 6300 0.0 24.851145 7 ACATGGG 9905 0.0 24.726019 3 CGCAGAG 6775 0.0 22.900368 8 CATGGGG 8575 0.0 22.249802 4 GTGTAGC 2265 0.0 19.067554 1 GCAGAGT 8175 0.0 18.049719 9 GTATATG 1145 0.0 17.823164 1 TATACCG 295 6.4157575E-8 17.695696 5 AGAGTAC 6585 0.0 17.292568 10-11 GAGTACA 6810 0.0 17.283287 1 GTATAGC 1205 0.0 16.935703 1 >>END_MODULE