##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921700_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3336315 Sequences flagged as poor quality 0 Sequence length 101 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.528411136238635 33.0 31.0 34.0 30.0 34.0 2 31.671822654635427 34.0 31.0 34.0 30.0 34.0 3 31.743047943614435 34.0 31.0 34.0 30.0 34.0 4 35.22673398644912 37.0 35.0 37.0 33.0 37.0 5 34.99399786890626 37.0 35.0 37.0 32.0 37.0 6 34.96813580252464 37.0 35.0 37.0 32.0 37.0 7 34.86729190738884 37.0 35.0 37.0 32.0 37.0 8 34.81001314324337 37.0 35.0 37.0 32.0 37.0 9 36.4195353256512 39.0 37.0 39.0 32.0 39.0 10-11 36.32172621589987 39.0 37.0 39.0 32.0 39.0 12-13 36.247423130010205 39.0 37.0 39.0 32.0 39.0 14-15 37.50278450925647 40.0 38.0 41.0 32.0 41.0 16-17 37.46826918321561 40.0 38.0 41.0 32.0 41.0 18-19 37.42497111333911 40.0 38.0 41.0 32.0 41.0 20-21 37.36805412558466 40.0 38.0 41.0 32.0 41.0 22-23 37.28329159566768 40.0 38.0 41.0 31.0 41.0 24-25 37.198930706483054 40.0 37.5 41.0 31.0 41.0 26-27 37.07163097609188 40.0 37.0 41.0 31.0 41.0 28-29 36.95368377985892 40.0 37.0 41.0 30.5 41.0 30-31 36.80287412909153 40.0 37.0 41.0 30.0 41.0 32-33 36.761635367164075 40.0 37.0 41.0 30.0 41.0 34-35 36.89464424072667 40.0 37.0 41.0 30.0 41.0 36-37 36.89528851442385 40.0 37.0 41.0 30.0 41.0 38-39 36.79256904698747 40.0 37.0 41.0 30.0 41.0 40-41 36.71587140302999 40.0 37.0 41.0 30.0 41.0 42-43 36.59917498797326 40.0 37.0 41.0 30.0 41.0 44-45 36.47624549840168 40.0 36.5 41.0 30.0 41.0 46-47 36.326899138720414 40.0 36.0 41.0 29.5 41.0 48-49 36.18592309179439 40.0 36.0 41.0 29.0 41.0 50-51 36.027864425271595 40.0 35.0 41.0 28.5 41.0 52-53 35.85193499414774 39.0 35.0 41.0 28.0 41.0 54-55 35.63342385236406 39.0 35.0 41.0 28.0 41.0 56-57 35.398220192038224 39.0 35.0 41.0 28.0 41.0 58-59 35.15031209583028 38.5 35.0 40.5 27.0 41.0 60-61 34.86510476378879 38.0 35.0 40.0 26.5 41.0 62-63 34.55104089392039 37.5 34.0 40.0 26.0 41.0 64-65 34.20730041977451 37.0 34.0 40.0 26.0 41.0 66-67 33.84863824309156 36.0 34.0 39.0 26.0 41.0 68-69 33.47638382466883 36.0 34.0 39.0 26.0 40.5 70-71 33.0688631019553 35.0 33.0 38.5 25.0 40.0 72-73 32.69772428562651 35.0 33.0 37.0 24.0 39.5 74-75 32.28990847686744 35.0 33.0 37.0 23.5 39.0 76-77 29.580348078643652 33.0 29.0 34.5 19.0 36.5 78-79 31.155972382703673 34.5 31.5 35.5 20.0 37.0 80-81 31.34172118040413 35.0 32.0 35.0 21.0 37.0 82-83 31.174178847021338 35.0 32.0 35.0 20.0 37.0 84-85 30.985335617290332 35.0 32.0 35.0 20.0 36.0 86-87 30.78763755820419 35.0 32.0 35.0 19.5 36.0 88-89 30.530268125162042 35.0 32.0 35.0 17.5 35.5 90-91 30.3384022491881 34.5 32.0 35.0 13.5 35.0 92-93 30.18495016208002 34.0 31.5 35.0 10.0 35.0 94-95 30.087816198410522 34.0 31.5 35.0 4.5 35.0 96-97 29.882986768335723 34.0 31.0 35.0 2.0 35.0 98-99 29.681024423653042 34.0 31.0 35.0 2.0 35.0 100-101 28.564370720390613 33.5 29.0 34.5 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 50490.0 3 17429.0 4 9947.0 5 7318.0 6 6400.0 7 6356.0 8 6768.0 9 7570.0 10 8286.0 11 8949.0 12 9611.0 13 10177.0 14 10872.0 15 11684.0 16 12598.0 17 13060.0 18 13035.0 19 11928.0 20 11831.0 21 11814.0 22 12470.0 23 14319.0 24 16955.0 25 20230.0 26 24527.0 27 29601.0 28 36263.0 29 43698.0 30 53385.0 31 66880.0 32 85169.0 33 112925.0 34 162291.0 35 241659.0 36 420563.0 37 818994.0 38 843389.0 39 86873.0 40 1.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.47662408712002 19.016308580906642 13.341064150367796 26.16600318160554 2 15.584603598224628 21.08561789185184 36.73622251156367 26.593555998359864 3 18.235497957999293 24.653711213377683 28.595773789967698 28.515017038655326 4 13.613489962860935 16.82078828335996 34.996867609281466 34.568854144497635 5 14.805230937953743 37.03473850556879 33.662702899117754 14.497327657359712 6 33.95470336277774 34.80641322690582 17.11635588673443 14.122527523582008 7 29.4649336168797 31.36181685482336 20.745972727395344 18.427276800901595 8 27.259026800526932 33.87791620395556 19.98252563082323 18.88053136469428 9 27.230118996628917 15.477324819343988 18.81532098457189 38.47723519945521 10-11 25.970590312457496 25.053248810982726 27.52133963437391 21.454821242185865 12-13 26.656696541573517 22.300104561924204 27.207621136045752 23.83557776045653 14-15 23.89935900385341 23.760111062635193 24.447583139234002 27.89294679427739 16-17 24.300047252739514 26.720382625798617 25.166722142052254 23.812847979409614 18-19 24.25784255570546 26.301557465815694 26.250287373289737 23.190312605189114 20-21 24.86135491448403 25.40343640489865 26.06956225394759 23.66564642666973 22-23 24.634409520683747 25.190202363985414 25.82702772370115 24.348360391629686 24-25 24.508533578156104 25.38212344187003 25.750946185449653 24.358396794524218 26-27 24.271517710029052 25.61488056682164 25.782045952046882 24.33155577110242 28-29 24.41746960947222 25.876412777922575 25.508574573377075 24.19754303922813 30-31 24.811274302232423 25.554335598456408 25.371227116123844 24.263162983187325 32-33 24.467695565494914 25.562648601357985 25.34245292082653 24.62720291232057 34-35 24.724613100403694 25.67402980206796 25.46133132370667 24.140025773821673 36-37 24.778532804182056 25.603807970840727 25.45678264831423 24.16087657666299 38-39 24.748944493833612 25.601142458413683 25.371457842397326 24.27845520535537 40-41 24.893793678127327 25.387050217388374 25.409575879107788 24.309580225376514 42-43 24.658187149008864 25.39985392683662 25.30111290484306 24.640846019311454 44-45 24.510973843766422 25.369858956754193 25.514640134841336 24.604527064638052 46-47 24.63636315949994 25.35042567237952 25.347817909188393 24.66539325893215 48-49 24.33940585345616 25.4282658455665 25.507806926353982 24.724521374623354 50-51 24.469036144343576 25.422435357615004 25.548086524856494 24.560441973184926 52-53 24.71421756647575 25.29078058188638 25.435989156041295 24.55901269559658 54-55 24.169796503175796 25.127421564248824 25.75465279047531 24.948129142100072 56-57 24.271885694724507 25.202597443862484 25.617609333675855 24.90790752773715 58-59 24.40011355603667 25.198018585058207 25.560360669321103 24.84150718958402 60-61 24.459332266206243 25.176645503977745 25.68084806628178 24.68317416353423 62-63 24.371274350925546 25.177356897675708 25.7061410523788 24.745227699019946 64-65 24.096072862305498 24.964137371857074 25.693054284504584 25.246735481332845 66-67 24.167665137594042 25.244589137336114 25.515503416795006 25.072242308274838 68-69 24.244883307610614 25.1516336064845 25.464849537448337 25.13863354845655 70-71 24.147139785946045 24.972866452857666 25.53350395061747 25.34648981057882 72-73 24.12230933803228 25.234366415003766 25.354748441292625 25.288575805671325 74-75 24.063496869978174 25.22911519919411 25.386905475739336 25.320482455088385 76-77 24.019073735261635 24.906871925744507 25.51112091244106 25.562933426552792 78-79 23.928854931236355 25.053085499003693 25.58205047127443 25.436009098485524 80-81 24.11038136603599 25.206978558452043 25.265286179744038 25.41735389576793 82-83 23.97605397225385 25.28818356322709 25.331101728644168 25.404660735874895 84-85 23.928917262166628 25.237082906369686 25.3392842844689 25.49471554699479 86-87 23.779367313470555 25.411331728133906 25.22947578066007 25.579825177735472 88-89 23.71263429138237 25.14553666273298 25.32485989714693 25.816969148737723 90-91 23.627461738854624 25.150842338976986 25.373576998065335 25.84811892410306 92-93 23.747729715593646 25.076760804994265 25.365179895297 25.810329584115088 94-95 23.521713174968145 25.055339785307563 25.420209914233638 26.002737125490654 96-97 23.37538143218549 25.091919948030196 25.44351655968029 26.089182060104026 98-99 23.23137967447045 24.930618978523132 25.433903018535275 26.404098328471143 100-101 23.20549445509993 25.057915798566622 25.40241326567773 26.334176480655717 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 37.0 1 41.5 2 74.5 3 110.0 4 98.0 5 91.5 6 145.5 7 280.0 8 421.5 9 443.0 10 357.5 11 278.0 12 285.0 13 310.5 14 340.0 15 395.0 16 432.0 17 477.5 18 510.5 19 563.0 20 639.5 21 733.0 22 842.5 23 977.0 24 1162.0 25 1408.0 26 1747.5 27 2183.0 28 2709.5 29 3430.0 30 4675.0 31 6817.5 32 10687.0 33 15703.0 34 21861.5 35 30221.5 36 41249.0 37 52480.0 38 63048.0 39 73285.0 40 82669.5 41 92680.5 42 103413.0 43 114444.0 44 124752.0 45 135959.0 46 144155.5 47 150317.0 48 157123.5 49 160866.5 50 161111.0 51 159855.5 52 157968.5 53 155888.0 54 153851.0 55 146876.5 56 134546.5 57 120107.5 58 107914.0 59 94050.5 60 76142.0 61 61543.5 62 50474.5 63 38555.5 64 27520.5 65 20235.5 66 15408.5 67 12186.0 68 9528.5 69 7084.5 70 5119.5 71 3640.5 72 2583.5 73 1897.5 74 1410.0 75 1054.0 76 739.5 77 431.0 78 258.5 79 152.5 80 86.0 81 53.5 82 47.0 83 28.0 84 13.5 85 9.0 86 6.5 87 5.5 88 4.5 89 3.5 90 3.5 91 2.0 92 1.0 93 1.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.5 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.1774712519651172 2 8.991956694736558E-5 3 0.011120053112490877 4 0.006144503741403315 5 0.02553715701305183 6 0.0025477210635086915 7 0.0 8 0.0 9 5.9946377964910385E-5 10-11 0.051958523101086077 12-13 4.346112402456003E-4 14-15 0.005380187422350707 16-17 1.4986594491227596E-5 18-19 0.001858337716912222 20-21 2.5477210635086914E-4 22-23 0.0 24-25 7.193565355789246E-4 26-27 0.002937372520280609 28-29 0.006039597579964721 30-31 0.017609248527192426 32-33 0.012543779589157497 34-35 0.011150026301473333 36-37 0.004645844292280555 38-39 2.9973188982455193E-5 40-41 0.0035967826778946234 42-43 0.009456541123964613 44-45 0.007373404489683978 46-47 0.003671715650350761 48-49 0.009081876261683924 50-51 0.0028324663588420156 52-53 0.002382868524105188 54-55 0.0043461124024560035 56-57 0.007972868269333081 58-59 0.015496138703929336 60-61 0.007643163190526075 62-63 0.02213520006354316 64-65 0.04097334933901625 66-67 0.06144503741403315 68-69 0.05138903251041942 70-71 0.07021219519140129 72-73 0.03295552128620949 74-75 0.026226540359648297 76-77 0.23884135640669424 78-79 0.0903092184041375 80-81 0.06815903174610312 82-83 0.026900937111753537 84-85 0.051613831427787846 86-87 0.07066179302613812 88-89 0.2973190481114643 90-91 0.3045276000617448 92-93 0.057878227925120984 94-95 0.009996058525648808 96-97 0.015945736538666162 98-99 8.392492915087454E-4 100-101 1.7983913389473116E-4 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 3336315.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 59.163156107834425 #Duplication Level Percentage of deduplicated Percentage of total 1 78.6211678610646 46.5147642754442 2 11.803056087394683 13.96612099696114 3 3.8174533260257486 6.775577611860993 4 1.7639125254065462 4.174345284047678 5 1.017894130307064 3.0110914666302597 6 0.6347459312581089 2.2532143571901737 7 0.4320914604566306 1.789472616950046 8 0.3099149387859972 1.466843672283672 9 0.2375182286774229 1.2647095237528816 >10 1.2742642854044555 13.31098154409484 >50 0.0664212373568929 2.6599086642852643 >100 0.01983339855288541 1.9763275712930573 >500 0.0014218970794473824 0.5554582180110414 >1k 3.046922295072591E-4 0.28118419719467513 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 2.9973188982455193E-5 0.0 5 0.0 0.0 0.0 2.9973188982455193E-5 0.0 6 0.0 0.0 0.0 2.9973188982455193E-5 0.0 7 0.0 0.0 0.0 2.9973188982455193E-5 2.9973188982455193E-5 8 0.0 0.0 0.0 2.9973188982455193E-5 2.9973188982455193E-5 9 0.0 0.0 0.0 5.9946377964910385E-5 2.9973188982455193E-5 10-11 0.0 0.0 0.0 7.493297245613799E-5 2.9973188982455193E-5 12-13 0.0 0.0 0.0 1.1989275592982077E-4 2.9973188982455193E-5 14-15 0.0 0.0 0.0 1.1989275592982077E-4 5.9946377964910385E-5 16-17 0.0 0.0 0.0 1.1989275592982077E-4 8.991956694736558E-5 18-19 0.0 0.0 0.0 1.1989275592982077E-4 1.0490616143859317E-4 20-21 0.0 0.0 0.0 1.7983913389473118E-4 1.4986594491227598E-4 22-23 0.0 0.0 0.0 3.147184843157795E-4 2.3978551185964154E-4 24-25 0.0 0.0 0.0 6.144503741403315E-4 2.9973188982455195E-4 26-27 0.0 0.0 0.0 0.001004101830912249 2.9973188982455195E-4 28-29 0.0 2.9973188982455193E-5 0.0 0.0032520910045963883 2.9973188982455195E-4 30-31 0.0 2.9973188982455193E-5 0.0 0.012693645534069774 2.9973188982455195E-4 32-33 0.0 2.9973188982455193E-5 0.0 0.03835069530305142 2.9973188982455195E-4 34-35 0.0 2.9973188982455193E-5 0.0 0.07674635038957653 3.297050788070071E-4 36-37 0.0 2.9973188982455193E-5 0.0 0.13805650845318862 3.446916732982347E-4 38-39 0.0 2.9973188982455193E-5 0.0 0.2433972811320274 3.596782677894623E-4 40-41 0.0 2.9973188982455193E-5 0.0 0.3648036831054622 3.596782677894623E-4 42-43 0.0 5.9946377964910385E-5 0.0 0.4940630605923002 3.596782677894623E-4 44-45 0.0 5.9946377964910385E-5 0.0 0.6483050910960146 4.1962464575437267E-4 46-47 0.0 5.9946377964910385E-5 0.0 0.8255065843602897 5.095442127017383E-4 48-49 0.0 5.9946377964910385E-5 0.0 1.0173799536314767 5.395174016841935E-4 50-51 0.0 5.9946377964910385E-5 0.0 1.2179455477075756 5.54503996175421E-4 52-53 0.0 5.9946377964910385E-5 0.0 1.4244158600132182 6.29436968631559E-4 54-55 0.0 8.991956694736558E-5 0.0 1.6617885301597721 7.04369941087697E-4 56-57 0.0 8.991956694736558E-5 0.0 1.9324464266713424 7.493297245613798E-4 58-59 0.0 8.991956694736558E-5 0.0 2.216022767634351 7.79302913543835E-4 60-61 0.0 8.991956694736558E-5 0.0 2.5177478745262363 8.092761025262902E-4 62-63 0.0 8.991956694736558E-5 0.0 2.8321666269521915 8.692224804912007E-4 64-65 0.0 8.991956694736558E-5 0.0 3.171118434560286 8.692224804912007E-4 66-67 0.0 8.991956694736558E-5 0.0 3.562358470348274 8.991956694736559E-4 68-69 0.0 8.991956694736558E-5 0.0 3.9811588534056286 8.991956694736559E-4 70-71 0.0 8.991956694736558E-5 0.0 4.4265754282794045 9.29168858456111E-4 72-73 0.0 8.991956694736558E-5 0.0 4.883756479828794 9.741286419297938E-4 74-75 0.0 8.991956694736558E-5 0.0 5.36313267781969 9.891152364210215E-4 76-77 0.0 8.991956694736558E-5 0.0 5.894047774265919 9.891152364210215E-4 78-79 0.0 8.991956694736558E-5 0.0 6.479004530447515 9.891152364210215E-4 80-81 0.0 8.991956694736558E-5 0.0 7.083039221416443 0.0010340750198947041 82-83 0.0 8.991956694736558E-5 0.0 7.7145293534933 0.001109007992350842 84-85 0.0 8.991956694736558E-5 0.0 8.373399993705629 0.001109007992350842 86-87 0.0 8.991956694736558E-5 0.0 9.073139077095538 0.0011389811813332972 88-89 0.0 8.991956694736558E-5 0.0 9.837470382742637 0.0011689543703157525 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 2460 0.0 44.828285 1 GTATCAA 4455 0.0 44.065796 1 TCAACGC 5595 0.0 34.519962 4 TATCAAC 5705 0.0 33.771698 2 ATCAACG 5785 0.0 33.141605 3 CAACGCA 5855 0.0 33.097374 5 AACGCAG 6230 0.0 31.252943 6 GTACATG 10075 0.0 26.56211 1 ACGCAGA 7630 0.0 25.019787 7 TACATGG 10670 0.0 24.550322 2 CGCAGAG 8095 0.0 22.995947 8 ACATGGG 11000 0.0 22.692827 3 CATGGGG 9385 0.0 20.781818 4 GCAGAGT 9200 0.0 19.20159 9 TAGCCCG 310 5.5970304E-9 18.385687 5 AGAGTAC 7585 0.0 17.90575 10-11 ATGGGGG 5710 0.0 17.800735 5 ATATGTA 1285 0.0 17.38577 1 GTATTAA 1400 0.0 17.315752 1 TAAGGCG 800 0.0 17.217428 5 >>END_MODULE