##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921699_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2499879 Sequences flagged as poor quality 0 Sequence length 101 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.4668405950848 31.0 31.0 34.0 26.0 34.0 2 30.522755701375946 31.0 31.0 34.0 26.0 34.0 3 30.587641641855466 33.0 31.0 34.0 26.0 34.0 4 34.0387434751842 37.0 35.0 37.0 30.0 37.0 5 34.03885108039229 37.0 35.0 37.0 30.0 37.0 6 34.08167715317421 37.0 35.0 37.0 30.0 37.0 7 34.00395579146031 37.0 35.0 37.0 30.0 37.0 8 33.971536622372525 37.0 35.0 37.0 30.0 37.0 9 35.53909849236703 39.0 37.0 39.0 30.0 39.0 10-11 35.437101155695935 39.0 37.0 39.0 30.0 39.0 12-13 35.33570164795976 39.0 35.0 39.0 29.0 39.0 14-15 36.484548052125724 40.0 37.0 41.0 29.0 41.0 16-17 36.427231077984175 40.0 37.0 41.0 29.0 41.0 18-19 36.392766609903916 40.0 37.0 41.0 28.5 41.0 20-21 36.31833000717235 40.0 37.0 41.0 28.0 41.0 22-23 36.22468187460273 40.0 37.0 41.0 27.5 41.0 24-25 36.11706546596855 40.0 36.0 41.0 27.0 41.0 26-27 35.97651966355171 40.0 36.0 41.0 27.0 41.0 28-29 35.84173193982589 40.0 36.0 41.0 27.0 41.0 30-31 35.69740115421587 40.0 36.0 41.0 26.5 41.0 32-33 35.529611833212726 39.5 35.5 41.0 25.5 41.0 34-35 35.366469737135276 39.0 35.0 41.0 25.0 41.0 36-37 35.34055668294346 39.0 35.0 41.0 25.0 41.0 38-39 35.52769654051256 40.0 35.5 41.0 25.5 41.0 40-41 35.59797294189039 40.0 36.0 41.0 25.5 41.0 42-43 35.44790327851868 40.0 35.0 41.0 25.0 41.0 44-45 35.33921821816176 40.0 35.0 41.0 24.5 41.0 46-47 35.18867993210871 40.0 35.0 41.0 24.0 41.0 48-49 35.03100870082112 40.0 35.0 41.0 23.0 41.0 50-51 33.34226356555658 37.0 32.5 39.5 20.0 40.0 52-53 33.46439167655714 37.5 33.5 39.5 21.0 40.0 54-55 34.38615308980955 39.0 34.0 40.5 22.0 41.0 56-57 34.41600973487117 39.0 34.0 41.0 22.0 41.0 58-59 34.232013429449985 38.5 34.0 41.0 21.5 41.0 60-61 33.98246595135204 38.0 34.0 40.5 20.0 41.0 62-63 33.69059982503153 37.5 34.0 40.0 19.5 41.0 64-65 33.4063864691051 37.0 34.0 40.0 18.0 41.0 66-67 33.06738046121432 36.5 33.0 39.5 17.0 41.0 68-69 32.70879970590576 36.0 33.0 39.0 13.5 41.0 70-71 32.30515676958765 35.5 33.0 39.0 11.0 40.5 72-73 31.943562268413793 35.0 32.5 37.5 7.5 40.0 74-75 31.54258206097175 35.0 32.0 37.0 6.0 39.0 76-77 31.165920430548837 35.0 32.0 37.0 2.0 39.0 78-79 30.82722783782735 35.0 32.0 36.0 2.0 38.5 80-81 30.51469371117562 35.0 31.5 36.0 2.0 37.0 82-83 30.209166123640387 35.0 31.0 35.0 2.0 37.0 84-85 29.955487645602048 35.0 31.0 35.0 2.0 36.5 86-87 29.733857918723267 35.0 31.0 35.0 2.0 36.0 88-89 29.530815691479468 35.0 31.0 35.0 2.0 36.0 90-91 29.320796926571248 35.0 31.0 35.0 2.0 35.5 92-93 29.14890180684745 34.0 31.0 35.0 2.0 35.0 94-95 28.936549929016564 34.0 30.5 35.0 2.0 35.0 96-97 28.72192834133172 34.0 30.0 35.0 2.0 35.0 98-99 28.47756811429673 34.0 30.0 35.0 2.0 35.0 100-101 27.42372030806291 33.5 27.5 35.0 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 80789.0 3 14000.0 4 9663.0 5 7104.0 6 6615.0 7 6905.0 8 7267.0 9 7847.0 10 8585.0 11 9133.0 12 9062.0 13 9127.0 14 9748.0 15 10291.0 16 10058.0 17 10398.0 18 10290.0 19 10032.0 20 9918.0 21 10408.0 22 11679.0 23 13044.0 24 15467.0 25 18275.0 26 21713.0 27 25874.0 28 30498.0 29 36331.0 30 43607.0 31 52942.0 32 66948.0 33 86622.0 34 120031.0 35 175424.0 36 293182.0 37 539494.0 38 592703.0 39 98796.0 40 9.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.23128722952499 17.651282498726246 13.108555021150512 25.008875250598255 2 15.966094217690207 19.411316579269418 39.38128432522105 25.241304877819324 3 19.59472956284514 23.523899306869062 28.606392496652433 28.274978633633364 4 13.396336235021533 15.803779373488341 36.64017171546536 34.15971267602477 5 14.802281326204989 36.77725846971175 33.91555346337917 14.504906740704094 6 33.54109774822314 34.80556691281016 17.537023538721392 14.116311800245319 7 29.629869675238297 31.043018173452957 20.6714875826407 18.655624568668046 8 26.836166329395706 34.12706033349417 19.892985484145864 19.143787852964262 9 26.84712687821036 15.964468020418288 19.032491639063576 38.15591346230778 10-11 25.749825517301943 25.082420445591502 27.63923959349982 21.528514443606735 12-13 26.604622317360448 22.35068994663479 27.274773310393464 23.7699144256113 14-15 23.708349974268245 23.863580883747694 24.72793572103737 27.70013342094669 16-17 24.000865880891762 26.825782283772853 25.384534743070652 23.78881709226473 18-19 23.889869483952737 26.43119983229424 26.500110416960045 23.17882026679298 20-21 24.591404582382253 25.608006865771372 26.404572379673958 23.39601617217242 22-23 24.345111171181593 25.449409774196134 26.040285859891675 24.1651931947306 24-25 24.139549605824065 25.57371696243034 26.136139456769097 24.150593974976502 26-27 24.007499492872 25.84210254668278 26.049394867264496 24.10100309318072 28-29 24.12340316663236 25.961060499588832 25.877286945027706 24.0382493887511 30-31 24.463078126040795 25.70735945075913 25.80661551038958 24.022946912810493 32-33 24.12471481246932 25.720104765787177 25.749548640601105 24.405631781142397 34-35 24.446746002409835 25.821700197939318 25.808218882162898 23.923334917487946 36-37 24.503127274501917 25.61528933314479 25.78725892904824 24.094324463305053 38-39 24.304117092185134 25.78111061239936 25.829554991771257 24.08521730364425 40-41 24.54515161746093 25.600997502244137 25.866634077966467 23.987216802328465 42-43 24.326055485710977 25.49961818815696 25.78335581034627 24.3909705157858 44-45 24.262454888912536 25.62630433096502 25.89844892213386 24.212791857988584 46-47 24.398260044499022 25.58307008786563 25.677110902621457 24.341558965013892 48-49 24.20661789495923 25.59606635293382 25.78698798426445 24.410327767842503 50-51 24.243347409813985 25.732782032344502 25.8551812739382 24.16868928390331 52-53 24.484316941183167 25.53801212023057 25.8217756053601 24.155895333226166 54-55 24.07490809661736 25.4133973595403 26.101342357613145 24.410352186229193 56-57 24.12465384621552 25.573007781745527 25.960992657611214 24.341345714427735 58-59 24.245499719061314 25.48295294522568 25.929508143814147 24.342039191898863 60-61 24.31759956058231 25.53481863997017 26.03872568869502 24.1088561107525 62-63 24.18896296937686 25.48833793530304 26.071401083306878 24.251298012013226 64-65 24.039196208737508 25.356753727484165 26.044485279674557 24.559564784103763 66-67 24.029005468940724 25.508421479231615 25.930708044028922 24.531865007798743 68-69 24.14064499500654 25.43359320432578 26.00615248699927 24.41960931366841 70-71 23.99737311575966 25.279652549067706 26.044050211405263 24.67892412376737 72-73 23.981364287296227 25.369001341859505 25.967576906387514 24.682057464456758 74-75 23.977818588716925 25.483329368263096 26.001948529713875 24.5369035133061 76-77 23.982256386556493 25.18302059486478 26.097196667000016 24.73752635157871 78-79 23.883005389460536 25.210395823774444 26.16302762321523 24.74357116354979 80-81 24.017914151999655 25.352173664632883 25.993382428855092 24.636529754512367 82-83 24.00895778989328 25.299421604704143 26.11581457671616 24.57580602868642 84-85 24.003912905773543 25.297797787764953 26.072100099827207 24.6261892066343 86-87 23.83921077841478 25.383080192108505 26.115817674158986 24.66189135531773 88-89 23.77851991356867 25.153117297773903 26.196820934056614 24.871541854600817 90-91 23.818531811407787 25.194355875306684 26.226088588385384 24.76102372490015 92-93 23.829182958713982 25.0831869279489 26.326765590795098 24.76086452254202 94-95 23.737332119951567 25.055411167402774 26.331266454184515 24.87599025846114 96-97 23.705207361915953 24.908814172195495 26.39884603886278 24.987132427025774 98-99 23.496134475347255 24.813861354377185 26.429261700830846 25.260742469444715 100-101 23.71272370588641 24.725866552030016 26.558161525394635 25.003248216688934 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 25.0 1 16.5 2 24.5 3 44.5 4 46.5 5 49.0 6 82.0 7 176.5 8 285.0 9 317.0 10 285.0 11 289.0 12 340.0 13 410.5 14 464.0 15 550.0 16 647.5 17 723.5 18 792.0 19 831.0 20 901.5 21 979.5 22 1050.0 23 1117.5 24 1236.5 25 1416.5 26 1671.5 27 1988.0 28 2390.0 29 3120.0 30 4418.0 31 6623.5 32 10501.5 33 15736.5 34 22082.5 35 29963.5 36 39509.5 37 49220.0 38 57897.5 39 65058.0 40 70692.5 41 76314.5 42 82568.5 43 89080.5 44 94790.0 45 100546.0 46 105443.0 47 110157.0 48 114667.0 49 116169.5 50 114656.0 51 112649.5 52 110870.5 53 108586.5 54 106225.5 55 101147.0 56 93021.0 57 83671.0 58 75318.5 59 65648.5 60 54127.0 61 44602.5 62 36432.0 63 28119.5 64 20392.0 65 14969.0 66 11267.5 67 8648.5 68 6706.5 69 4987.0 70 3729.5 71 2730.0 72 1917.5 73 1442.0 74 1105.5 75 827.0 76 625.0 77 414.5 78 256.5 79 191.5 80 156.5 81 127.0 82 102.0 83 81.0 84 61.0 85 55.0 86 46.5 87 40.5 88 35.0 89 30.0 90 31.0 91 25.5 92 21.5 93 21.5 94 16.5 95 11.5 96 8.5 97 5.5 98 6.0 99 7.0 100 6.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.05432262921525402 2 0.07592367470585576 3 0.07176347335211025 4 0.07172347141601654 5 0.06732325844570877 6 0.010120489831707855 7 0.014160685377172254 8 0.01620078411795131 9 0.006360307838899403 10-11 0.013900672792563162 12-13 0.023661145199427653 14-15 0.04084197675167479 16-17 0.027601335904657787 18-19 0.010520509192644923 20-21 0.020961014513102436 22-23 0.038501863490192925 24-25 0.03472168052933762 26-27 0.02040098740779054 28-29 0.011340548882565917 30-31 0.011340548882565917 32-33 0.008320402707491042 34-35 0.004920238139525953 36-37 7.400358177335783E-4 38-39 0.004200203289839229 40-41 0.0014000677632797426 42-43 0.23399132518013874 44-45 0.2026298072826725 46-47 0.20871010156891592 48-49 0.21601045490601745 50-51 0.20697001734883966 52-53 0.21489040069539367 54-55 0.21103021386235093 56-57 0.212930305826802 58-59 0.22251076952124485 60-61 0.2267709757152246 62-63 0.21181025161617822 64-65 0.21205026323274045 66-67 0.20985015674758659 68-69 0.20462990408735782 70-71 0.19632950234791366 72-73 0.20827008027188518 74-75 0.20711002412516763 76-77 0.20038969886142488 78-79 0.2189505972089049 80-81 0.23047115480389252 82-83 0.22949110736959671 84-85 0.2227707821058539 86-87 0.24321177144973816 88-89 0.23505137648662197 90-91 0.24259174144028572 92-93 0.237911514917322 94-95 0.24091166012435 96-97 0.24831201830168578 98-99 0.2415716920698962 100-101 0.2481320095892641 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 2499879.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 65.66195544472727 #Duplication Level Percentage of deduplicated Percentage of total 1 80.99429394027659 53.18243719983585 2 11.152492608769435 14.645889455493377 3 3.401265254559001 6.700011828016561 4 1.4680753192823777 3.8558678481689297 5 0.7870732241366347 2.5840383487498775 6 0.5008301734010364 1.973129311874033 7 0.332764324234678 1.5294969362044546 8 0.24141431248982403 1.2681388664341033 9 0.1783892303518232 1.0542047125662544 >10 0.8968628305094432 10.245789419904064 >50 0.03674322063228294 1.60736085394144 >100 0.009063537456656182 0.9885329768066586 >500 6.100199169039809E-4 0.2673677965318361 >1k 1.2200398337877003E-4 0.09773444547249174 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 1.200058082811208E-4 7 0.0 0.0 0.0 0.0 1.200058082811208E-4 8 0.0 0.0 0.0 0.0 1.6000774437482774E-4 9 0.0 0.0 0.0 4.0001936093706936E-5 1.6000774437482774E-4 10-11 0.0 0.0 0.0 4.0001936093706936E-5 1.6000774437482774E-4 12-13 0.0 0.0 0.0 4.0001936093706936E-5 2.2001064851538812E-4 14-15 0.0 0.0 0.0 4.0001936093706936E-5 2.8001355265594853E-4 16-17 0.0 0.0 0.0 8.000387218741387E-5 3.6001742484336244E-4 18-19 0.0 0.0 0.0 8.000387218741387E-5 3.6001742484336244E-4 20-21 0.0 0.0 0.0 1.0000484023426734E-4 5.000242011713367E-4 22-23 2.0000968046853468E-5 0.0 0.0 1.4000677632797426E-4 6.200300094524574E-4 24-25 4.0001936093706936E-5 0.0 0.0 2.2001064851538812E-4 7.200348496867249E-4 26-27 4.0001936093706936E-5 2.0000968046853468E-5 0.0 4.400212970307763E-4 7.200348496867249E-4 28-29 4.0001936093706936E-5 4.0001936093706936E-5 0.0 0.0015600755076545705 7.200348496867249E-4 30-31 4.0001936093706936E-5 4.0001936093706936E-5 0.0 0.006760327199836472 7.400358177335783E-4 32-33 4.0001936093706936E-5 4.0001936093706936E-5 0.0 0.020200977727322003 8.000387218741387E-4 34-35 4.0001936093706936E-5 4.0001936093706936E-5 0.0 0.03942190802034819 8.800425940615526E-4 36-37 4.0001936093706936E-5 4.0001936093706936E-5 0.0 0.07048341139711162 8.800425940615526E-4 38-39 4.0001936093706936E-5 4.0001936093706936E-5 0.0 0.12480604061236564 9.40045498202113E-4 40-41 4.0001936093706936E-5 4.0001936093706936E-5 0.0 0.18974918386049883 9.8004743429582E-4 42-43 4.0001936093706936E-5 8.000387218741387E-5 0.0 0.2602125942895636 0.0010400503384363803 44-45 4.0001936093706936E-5 8.000387218741387E-5 0.0 0.3489368885454056 0.0011000532425769407 46-47 4.0001936093706936E-5 8.000387218741387E-5 0.0 0.45118183720092053 0.001160056146717501 48-49 4.0001936093706936E-5 8.000387218741387E-5 0.0 0.5577869968906495 0.0013600658271860357 50-51 4.0001936093706936E-5 8.000387218741387E-5 0.0 0.6788128545421599 0.0014000677632797426 52-53 4.0001936093706936E-5 8.000387218741387E-5 0.0 0.8035188903142911 0.0015200735715608636 54-55 6.000290414056041E-5 8.000387218741387E-5 0.0 0.9425856211440634 0.0016800813159356914 56-57 8.000387218741387E-5 8.000387218741387E-5 0.0 1.1050134826525604 0.0017200832520293983 58-59 8.000387218741387E-5 8.000387218741387E-5 0.0 1.2819820479311197 0.0017400842200762517 60-61 8.000387218741387E-5 8.000387218741387E-5 0.0 1.4801116374032501 0.0017600851881231052 62-63 8.000387218741387E-5 8.000387218741387E-5 0.0 1.6793612810860046 0.001840089060310519 64-65 8.000387218741387E-5 8.000387218741387E-5 0.0 1.8932916353151494 0.0018600900283573724 66-67 8.000387218741387E-5 8.000387218741387E-5 0.0 2.145123823993081 0.001880090996404226 68-69 8.000387218741387E-5 8.000387218741387E-5 0.0 2.418157038800678 0.001880090996404226 70-71 8.000387218741387E-5 8.000387218741387E-5 0.0 2.7093511325948176 0.001880090996404226 72-73 8.000387218741387E-5 8.000387218741387E-5 0.0 3.0194461411932334 0.0021001016449196143 74-75 8.000387218741387E-5 8.000387218741387E-5 0.0 3.350822179793502 0.002180105517107028 76-77 8.000387218741387E-5 8.000387218741387E-5 0.0 3.7114396336782702 0.002260109389294442 78-79 1.200058082811208E-4 8.000387218741387E-5 0.0 4.11335908657979 0.0023201122934350025 80-81 1.200058082811208E-4 8.000387218741387E-5 0.0 4.54121979503808 0.0023401132614818557 82-83 1.200058082811208E-4 8.000387218741387E-5 0.0 4.991141571252049 0.002440118101716123 84-85 1.200058082811208E-4 8.000387218741387E-5 0.0 5.4667045885020835 0.002440118101716123 86-87 1.200058082811208E-4 8.000387218741387E-5 0.0 5.974029143010522 0.002560123909997244 88-89 1.200058082811208E-4 8.000387218741387E-5 0.0 6.51847549421392 0.0026401277821846577 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 1815 0.0 47.855854 1 GTATCAA 3475 0.0 43.980648 1 TCAACGC 4010 0.0 37.047638 4 CAACGCA 4125 0.0 36.011913 5 ATCAACG 4260 0.0 34.650646 3 TATCAAC 4375 0.0 33.634037 2 AACGCAG 4595 0.0 32.52003 6 ACGCAGA 5420 0.0 27.137835 7 GTACATG 7570 0.0 25.83223 1 CGCAGAG 5760 0.0 25.372726 8 TACATGG 7860 0.0 24.216824 2 ACATGGG 8045 0.0 23.12707 3 CATGGGG 6615 0.0 20.951426 4 GCAGAGT 6655 0.0 20.60741 9 AGAGTAC 5540 0.0 18.416483 10-11 GTATATA 800 0.0 18.392141 1 GAGTACA 5865 0.0 17.237417 1 CAGAGTA 5920 0.0 17.194263 10-11 AGTACAT 5575 0.0 16.77323 2 TATACTG 1130 0.0 16.379929 5 >>END_MODULE