##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921699_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2499879 Sequences flagged as poor quality 0 Sequence length 101 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.43049483595006 33.0 31.0 34.0 29.0 34.0 2 31.56735866015915 34.0 31.0 34.0 29.0 34.0 3 31.64213147916359 34.0 31.0 34.0 28.0 34.0 4 35.11871734591954 37.0 35.0 37.0 33.0 37.0 5 34.87130377110252 37.0 35.0 37.0 32.0 37.0 6 34.851207598447765 37.0 35.0 37.0 32.0 37.0 7 34.745250470122755 37.0 35.0 37.0 32.0 37.0 8 34.689758984334844 37.0 35.0 37.0 32.0 37.0 9 36.288061942198006 39.0 37.0 39.0 32.0 39.0 10-11 36.181453582353384 39.0 37.0 39.0 32.0 39.0 12-13 36.10791402303872 39.0 37.0 39.0 32.0 39.0 14-15 37.36144389388446 40.0 38.0 41.0 32.0 41.0 16-17 37.32877991294779 40.0 38.0 41.0 32.0 41.0 18-19 37.293744817249156 40.0 38.0 41.0 31.0 41.0 20-21 37.23606062533427 40.0 38.0 41.0 31.0 41.0 22-23 37.14671550103025 40.0 38.0 41.0 31.0 41.0 24-25 37.070682421029176 40.0 37.5 41.0 31.0 41.0 26-27 36.947796873368674 40.0 37.0 41.0 30.5 41.0 28-29 36.828321090740786 40.0 37.0 41.0 30.0 41.0 30-31 36.68435592282667 40.0 37.0 41.0 30.0 41.0 32-33 36.63953395344335 40.0 37.0 41.0 30.0 41.0 34-35 36.77949852772875 40.0 37.0 41.0 30.0 41.0 36-37 36.782760485607504 40.0 37.0 41.0 30.0 41.0 38-39 36.6799481094885 40.0 37.0 41.0 30.0 41.0 40-41 36.60691417464605 40.0 37.0 41.0 30.0 41.0 42-43 36.49777109212086 40.0 37.0 41.0 30.0 41.0 44-45 36.372710639194935 40.0 36.5 41.0 29.5 41.0 46-47 36.230194541415806 40.0 36.0 41.0 29.0 41.0 48-49 36.095848239054774 40.0 36.0 41.0 28.5 41.0 50-51 35.942985640505 40.0 35.5 41.0 28.0 41.0 52-53 35.77517911866934 39.5 35.0 41.0 28.0 41.0 54-55 35.56794688862941 39.0 35.0 41.0 28.0 41.0 56-57 35.34377463869251 39.0 35.0 41.0 27.0 41.0 58-59 35.10603753221656 39.0 35.0 40.5 26.5 41.0 60-61 34.83464779695338 38.0 35.0 40.0 26.0 41.0 62-63 34.53510229895127 37.5 34.0 40.0 26.0 41.0 64-65 34.19968666483458 37.0 34.0 40.0 26.0 41.0 66-67 33.84896028967802 36.5 34.0 39.5 25.5 41.0 68-69 33.48831983468 36.0 34.0 39.0 25.0 41.0 70-71 33.08782685081958 35.5 33.5 39.0 24.0 40.0 72-73 32.72356062033403 35.0 33.0 37.5 23.0 40.0 74-75 32.315435267066924 35.0 33.0 37.0 22.5 39.0 76-77 29.606474153349023 33.0 29.0 34.5 18.5 36.5 78-79 31.17578730810571 34.5 31.5 36.0 20.0 37.5 80-81 31.352270249880092 35.0 32.0 36.0 20.0 37.0 82-83 31.17237994318925 35.0 32.0 35.0 20.0 37.0 84-85 30.97235106179139 35.0 32.0 35.0 19.5 36.5 86-87 30.766043476504265 35.0 32.0 35.0 18.0 36.0 88-89 30.49690485019475 35.0 32.0 35.0 14.5 36.0 90-91 30.30352249048854 34.5 32.0 35.0 9.0 35.0 92-93 30.14694311204662 34.0 31.5 35.0 7.0 35.0 94-95 30.045686611231986 34.0 31.5 35.0 2.0 35.0 96-97 29.84993693694775 34.0 31.0 35.0 2.0 35.0 98-99 29.65470708782305 34.0 31.0 35.0 2.0 35.0 100-101 28.53551211878655 33.5 29.0 34.5 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 43741.0 3 14833.0 4 7993.0 5 5677.0 6 5019.0 7 5058.0 8 5252.0 9 5755.0 10 6287.0 11 6708.0 12 7349.0 13 7892.0 14 8406.0 15 8796.0 16 9424.0 17 9962.0 18 9610.0 19 8810.0 20 8628.0 21 8488.0 22 8957.0 23 10544.0 24 12146.0 25 15217.0 26 17863.0 27 21763.0 28 26117.0 29 32048.0 30 38972.0 31 48266.0 32 61777.0 33 81869.0 34 116611.0 35 175122.0 36 308942.0 37 604354.0 38 648467.0 39 77153.0 40 3.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.81279553533041 19.439287762107607 13.857569250581905 25.890347451980077 2 14.995331772190482 20.870778493990507 37.89720938381793 26.23668035000108 3 18.097412523598617 24.850087033333505 28.509847708668968 28.54265273439891 4 13.061073450961016 17.14345150108313 35.70479598511018 34.090679062845666 5 14.460152055867187 37.19510902031959 34.07952823548853 14.265210688324684 6 33.37397627588237 35.61121825220146 17.288251669420866 13.7265538024953 7 29.206053572992936 31.326876220809087 20.879850584768302 18.587219621429675 8 26.722693378359512 34.73628123601182 19.748035804932957 18.792989580695707 9 26.633859732354935 15.959618829398876 19.09825199469734 38.308269443548845 10-11 25.563401377669177 25.42234467103211 27.721935188355427 21.29231876294329 12-13 26.349187999075152 22.614179754659634 27.47834490858339 23.55828733768182 14-15 23.508692062252575 24.16493716176645 24.709011133904482 27.617359642076494 16-17 23.870255320357504 27.17913547015676 25.385088638290092 23.56552057119565 18-19 23.792757907537712 26.712916478320526 26.502942200069608 22.991383414072157 20-21 24.44255235059659 25.776818530199098 26.462832556494803 23.31779656270951 22-23 24.17783504278308 25.596103970652972 26.130829958335976 24.095231028227975 24-25 24.030396865748244 25.823075104515723 26.154573270615227 23.9919547591208 26-27 23.893990279655423 26.014572716270067 26.14148243755472 23.949954566519796 28-29 23.965580523632887 26.16812298042102 25.991085099595058 23.87521139635103 30-31 24.355849341871398 25.92169910983253 25.78931122894482 23.933140319351256 32-33 24.06666876035048 25.94278282184438 25.758371951464675 24.232176466340466 34-35 24.28952916654998 26.016218530090697 25.83407011493793 23.860182188421394 36-37 24.398125109009943 25.819894774403423 25.856498112627875 23.925482003958763 38-39 24.248938498411025 26.015684362260004 25.78799329647421 23.947383842854762 40-41 24.427002097375343 25.81699830105797 25.81483812046687 23.941161481099822 42-43 24.28961258942352 25.71828860523711 25.72933027473754 24.26276853060183 44-45 24.219118326848864 25.78157175858371 25.832518065736537 24.166791848830886 46-47 24.282842320418805 25.80753557860957 25.643901276971608 24.265720824000017 48-49 24.11233856791609 25.83819466503018 25.776306198687983 24.273160568365753 50-51 24.185634574085395 25.88700081546051 25.764511726770127 24.162852883683968 52-53 24.367319826635622 25.698554876818203 25.728557018971156 24.20556827757502 54-55 23.992112072733107 25.62700280965905 25.997837000571455 24.38304811703639 56-57 24.055427759886385 25.725501570219834 25.87300222031084 24.34606844958294 58-59 24.144564160863606 25.591830112885866 25.884912070411687 24.378693655838845 60-61 24.183198979227505 25.706816744813477 25.970670993094902 24.139313282864116 62-63 24.128927197124813 25.644600976066467 25.916415181344505 24.31005664546421 64-65 23.947975808751067 25.496375814753865 25.9210933083884 24.63455506810667 66-67 23.96992741825573 25.73488840959583 25.75720308819141 24.53798108395703 68-69 24.009018663077452 25.62010312589488 25.77436973116708 24.596508479860592 70-71 23.9169689902652 25.47664252481135 25.81707430815832 24.789314176765135 72-73 23.920367215801708 25.590301161935013 25.725494103490927 24.763837518772352 74-75 23.860839760617147 25.666834655335467 25.696264349476717 24.77606123457067 76-77 23.805737799072986 25.419076561121457 25.89011983868617 24.88506580111938 78-79 23.738939705040117 25.431256667305245 25.925505544135184 24.904298083519453 80-81 23.898885811321858 25.56225308328785 25.70964005675319 24.829221048637102 82-83 23.896547991862093 25.552238674583165 25.77273201066675 24.778481322887995 84-85 23.775245319145018 25.520995508652504 25.774699409505068 24.929059762697403 86-87 23.64676156671952 25.63812553114581 25.76255825841417 24.9525546437205 88-89 23.612516459629074 25.44433977328441 25.799009172456795 25.14413459462973 90-91 23.515542404333218 25.484868849992477 25.868599227644317 25.13098951802999 92-93 23.599566223290942 25.32963007507843 25.925262570389158 25.145541131241465 94-95 23.404122959478308 25.322761929584566 25.978077212426687 25.295037898510444 96-97 23.384165881847434 25.25735002884561 25.94586387593748 25.41262021336948 98-99 23.147102531946853 25.16991985535161 25.94180462466823 25.741172988033306 100-101 23.146191197274582 25.224716370648352 26.001015651391963 25.628076780685106 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 23.0 1 16.5 2 20.5 3 34.0 4 39.0 5 36.0 6 73.0 7 182.5 8 244.0 9 248.5 10 216.0 11 180.5 12 186.0 13 194.0 14 225.5 15 266.5 16 290.0 17 329.5 18 367.0 19 394.0 20 457.5 21 545.0 22 658.0 23 806.0 24 963.0 25 1135.5 26 1461.5 27 1927.0 28 2527.5 29 3444.0 30 5032.5 31 7613.5 32 11954.0 33 17808.5 34 24260.0 35 32112.0 36 41715.5 37 50771.0 38 58718.0 39 65672.5 40 70729.0 41 76101.5 42 82651.0 43 88982.5 44 95072.0 45 100815.5 46 105396.5 47 109868.5 48 114343.0 49 116434.5 50 114723.5 51 112805.0 52 111426.0 53 109146.0 54 106335.5 55 100934.5 56 92995.5 57 83475.5 58 74702.5 59 65035.5 60 53401.5 61 43807.5 62 35657.0 63 27230.0 64 19661.5 65 14178.0 66 10542.0 67 8112.0 68 6189.0 69 4582.5 70 3431.0 71 2447.0 72 1700.0 73 1244.5 74 888.5 75 593.5 76 407.0 77 258.5 78 155.5 79 95.5 80 62.0 81 37.5 82 20.0 83 14.5 84 11.5 85 5.5 86 5.5 87 6.5 88 7.5 89 5.0 90 1.5 91 2.5 92 2.5 93 2.5 94 1.0 95 0.5 96 0.5 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.16784812384919431 2 4.0001936093706936E-5 3 0.010480507256551218 4 0.007360356241242076 5 0.02664128943840882 6 0.0024001161656224163 7 0.0 8 0.0 9 4.0001936093706936E-5 10-11 0.04954239785205604 12-13 2.0000968046853467E-4 14-15 0.005080245883900781 16-17 0.0 18-19 0.00196009486859164 20-21 1.200058082811208E-4 22-23 2.0000968046853468E-5 24-25 6.40030977499311E-4 26-27 0.002820136494606339 28-29 0.005260254596322462 30-31 0.016220785085998165 32-33 0.011900575987877814 34-35 0.010760520809207166 36-37 0.004280207162026642 38-39 2.0000968046853468E-5 40-41 0.00352017037624621 42-43 0.010280497576082683 44-45 0.007540364953663758 46-47 0.0039001887691364266 48-49 0.008840427876709233 50-51 0.002580124878044097 52-53 0.002300111325388149 54-55 0.004380212002260909 56-57 0.009160443365458888 58-59 0.016300788958185576 60-61 0.008140393995069361 62-63 0.022461087116616443 64-65 0.04166201644159577 66-67 0.06094294963876252 68-69 0.05130248304017914 70-71 0.06912334556992558 72-73 0.034321661168400554 74-75 0.028101360105829122 76-77 0.2293911025293624 78-79 0.08598416163342305 80-81 0.0677432787746927 82-83 0.028421375594578774 84-85 0.0518825111135379 86-87 0.06968337267523748 88-89 0.29669436000702437 90-91 0.30017452844717685 92-93 0.05434263018330088 94-95 0.009700469502723932 96-97 0.01460070667420303 98-99 9.600464662489664E-4 100-101 2.2001064851538812E-4 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 2499879.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 65.15683970076118 #Duplication Level Percentage of deduplicated Percentage of total 1 80.80710590484806 52.65135646124618 2 11.194632340315517 14.588137298137902 3 3.41671731882481 6.6786750793644805 4 1.5148421620853934 3.9480931170780984 5 0.8123263303406085 2.6464308245355306 6 0.4976148110510676 1.9453805085827385 7 0.3445367471987066 1.5714247925773461 8 0.24315014942690644 1.2674316247540058 9 0.18832077909498887 1.1043348134233182 >10 0.9339315488382823 10.643713844793856 >50 0.03619473259467924 1.5592677022505714 >100 0.009950023379915405 1.0537353091280528 >500 5.540334553874018E-4 0.2423851935748388 >1k 1.231185456397727E-4 0.09963343055312368 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 4.0001936093706936E-5 2 0.0 0.0 0.0 0.0 4.0001936093706936E-5 3 0.0 0.0 0.0 0.0 4.0001936093706936E-5 4 0.0 0.0 0.0 0.0 4.0001936093706936E-5 5 0.0 0.0 0.0 0.0 4.0001936093706936E-5 6 0.0 0.0 0.0 0.0 4.0001936093706936E-5 7 0.0 0.0 0.0 0.0 4.0001936093706936E-5 8 0.0 0.0 0.0 0.0 4.0001936093706936E-5 9 0.0 0.0 0.0 0.0 8.000387218741387E-5 10-11 0.0 0.0 0.0 6.000290414056041E-5 8.000387218741387E-5 12-13 0.0 0.0 0.0 8.000387218741387E-5 3.00014520702802E-4 14-15 0.0 2.0000968046853468E-5 0.0 8.000387218741387E-5 4.0001936093706934E-4 16-17 0.0 4.0001936093706936E-5 0.0 8.000387218741387E-5 5.200251692181902E-4 18-19 0.0 4.0001936093706936E-5 0.0 8.000387218741387E-5 5.200251692181902E-4 20-21 0.0 4.0001936093706936E-5 0.0 1.0000484023426734E-4 6.000290414056041E-4 22-23 0.0 4.0001936093706936E-5 0.0 1.8000871242168122E-4 6.200300094524575E-4 24-25 0.0 4.0001936093706936E-5 0.0 2.600125846090951E-4 7.200348496867249E-4 26-27 0.0 4.0001936093706936E-5 0.0 5.200251692181902E-4 7.600367857804318E-4 28-29 0.0 4.0001936093706936E-5 0.0 0.0016000774437482774 7.600367857804318E-4 30-31 0.0 4.0001936093706936E-5 0.0 0.006780328167883326 8.200396899209921E-4 32-33 0.0 4.0001936093706936E-5 0.0 0.02048099127997795 8.800425940615526E-4 34-35 0.0 4.0001936093706936E-5 0.0 0.03986192931737896 9.600464662489664E-4 36-37 0.0 4.0001936093706936E-5 0.0 0.07100343656632982 9.600464662489664E-4 38-39 0.0 4.0001936093706936E-5 0.0 0.12506605319697472 0.0010000484023426734 40-41 0.0 4.0001936093706936E-5 0.0 0.18986918966877997 0.0010400503384363803 42-43 0.0 4.0001936093706936E-5 0.0 0.26067261655464125 0.0010400503384363803 44-45 0.0 4.0001936093706936E-5 0.0 0.34921690209806155 0.0010400503384363803 46-47 0.0 4.0001936093706936E-5 0.0 0.4519618749547478 0.0010400503384363803 48-49 0.0 4.0001936093706936E-5 0.0 0.5586470385166642 0.0010800522745300872 50-51 0.0 4.0001936093706936E-5 0.0 0.6789528613184879 0.0010800522745300872 52-53 0.0 4.0001936093706936E-5 0.0 0.8032388767616352 0.0010800522745300872 54-55 0.0 4.0001936093706936E-5 0.0 0.9422056027511732 0.0011000532425769407 56-57 0.0 4.0001936093706936E-5 0.0 1.1038934284419366 0.0011200542106237941 58-59 0.0 4.0001936093706936E-5 0.0 1.2805019762956529 0.0011200542106237941 60-61 0.0 4.0001936093706936E-5 0.0 1.4788915783523922 0.0011600561467175012 62-63 0.0 4.0001936093706936E-5 0.0 1.6793612810860046 0.0012000580828112081 64-65 0.0 4.0001936093706936E-5 0.0 1.8939116653246018 0.0012200590508580616 66-67 0.0 4.0001936093706936E-5 0.0 2.145863859810815 0.001240060018904915 68-69 0.0 4.0001936093706936E-5 0.0 2.4188170707462238 0.001240060018904915 70-71 0.0 4.0001936093706936E-5 0.0 2.7094911393711456 0.001240060018904915 72-73 0.0 4.0001936093706936E-5 0.0 3.020086172170733 0.0014800716354671567 74-75 0.0 4.0001936093706936E-5 0.0 3.3537823230644364 0.0015600755076545705 76-77 0.0 4.0001936093706936E-5 0.0 3.717579930868654 0.001580076475701424 78-79 0.0 4.0001936093706936E-5 0.0 4.122279518328687 0.0016400793798419843 80-81 0.0 4.0001936093706936E-5 0.0 4.552300331336037 0.001720083252029398 82-83 0.0 4.0001936093706936E-5 0.0 5.005102246948752 0.0018600900283573724 84-85 0.0 4.0001936093706936E-5 0.0 5.483225388108785 0.001880090996404226 86-87 0.0 4.0001936093706936E-5 0.0 5.9936300916964385 0.00196009486859164 88-89 0.0 4.0001936093706936E-5 0.0 6.543296695560064 0.0020400987407790537 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 1520 0.0 45.3469 1 GTATCAA 3170 0.0 45.28672 1 TCAACGC 3920 0.0 35.958916 4 CAACGCA 4105 0.0 34.25152 5 TATCAAC 4185 0.0 33.679928 2 ATCAACG 4190 0.0 33.52647 3 AACGCAG 4445 0.0 32.05649 6 GTACATG 7585 0.0 26.572563 1 ACGCAGA 5585 0.0 25.086956 7 TACATGG 7860 0.0 24.755487 2 CGCAGAG 5970 0.0 23.548676 8 ACATGGG 8165 0.0 23.540136 3 CATGGGG 6570 0.0 20.949268 4 TCTATAC 710 0.0 19.384285 3 GCAGAGT 7025 0.0 19.13442 9 TATACTG 930 0.0 18.898186 5 TAGATCG 135 0.009402439 17.592903 5 AGAGTAC 5825 0.0 17.082968 10-11 ATGGGGG 3505 0.0 17.075909 5 GTATATG 920 0.0 17.050978 1 >>END_MODULE