##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921698_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3380109 Sequences flagged as poor quality 0 Sequence length 101 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.391369627429174 33.0 31.0 34.0 29.0 34.0 2 31.527008744392564 34.0 31.0 34.0 28.0 34.0 3 31.59899281354536 34.0 31.0 34.0 28.0 34.0 4 35.0776261948949 37.0 35.0 37.0 32.0 37.0 5 34.83067291616927 37.0 35.0 37.0 32.0 37.0 6 34.80905438256577 37.0 35.0 37.0 32.0 37.0 7 34.69439979598291 37.0 35.0 37.0 32.0 37.0 8 34.64455524954965 37.0 35.0 37.0 32.0 37.0 9 36.23670360926231 39.0 37.0 39.0 32.0 39.0 10-11 36.128647182679615 39.0 37.0 39.0 32.0 39.0 12-13 36.05406023888578 39.0 37.0 39.0 32.0 39.0 14-15 37.303048511157485 40.0 38.0 41.0 32.0 41.0 16-17 37.27211149107913 40.0 38.0 41.0 31.0 41.0 18-19 37.22857384184948 40.0 38.0 41.0 31.0 41.0 20-21 37.17264635548735 40.0 38.0 41.0 31.0 41.0 22-23 37.085932435906656 40.0 38.0 41.0 31.0 41.0 24-25 37.00621888229048 40.0 37.0 41.0 31.0 41.0 26-27 36.88583593014308 40.0 37.0 41.0 30.0 41.0 28-29 36.769417643040505 40.0 37.0 41.0 30.0 41.0 30-31 36.62283775464046 40.0 37.0 41.0 30.0 41.0 32-33 36.580504800288985 40.0 37.0 41.0 30.0 41.0 34-35 36.70970048599024 40.0 37.0 41.0 30.0 41.0 36-37 36.71459692572044 40.0 37.0 41.0 30.0 41.0 38-39 36.61678144107187 40.0 37.0 41.0 30.0 41.0 40-41 36.544650926937564 40.0 37.0 41.0 30.0 41.0 42-43 36.436680000556194 40.0 37.0 41.0 30.0 41.0 44-45 36.32002133659003 40.0 36.5 41.0 29.5 41.0 46-47 36.17409793589496 40.0 36.0 41.0 28.5 41.0 48-49 36.042153522268066 40.0 36.0 41.0 28.0 41.0 50-51 35.898560815642334 40.0 35.5 41.0 28.0 41.0 52-53 35.73857588616225 39.5 35.0 41.0 28.0 41.0 54-55 35.53535596041429 39.0 35.0 41.0 27.0 41.0 56-57 35.3235477021599 39.0 35.0 41.0 27.0 41.0 58-59 35.08793843630487 39.0 35.0 41.0 26.0 41.0 60-61 34.820184497008825 38.0 35.0 40.0 26.0 41.0 62-63 34.5282511599478 38.0 34.0 40.0 26.0 41.0 64-65 34.20361399588002 37.0 34.0 40.0 26.0 41.0 66-67 33.860107026134365 37.0 34.0 39.5 25.0 41.0 68-69 33.50177878879054 36.0 34.0 39.0 24.5 41.0 70-71 33.10606995218201 35.5 33.5 39.0 23.5 40.0 72-73 32.740174355324044 35.0 33.0 38.0 23.0 40.0 74-75 32.333307890366854 35.0 33.0 37.0 22.0 39.0 76-77 29.607057050527068 33.0 29.0 34.5 17.5 36.5 78-79 31.17541638450121 34.5 31.5 36.0 19.5 38.0 80-81 31.34203467994671 35.0 32.0 36.0 20.0 37.0 82-83 31.155898079026446 35.0 32.0 35.0 19.5 37.0 84-85 30.9423452024772 35.0 32.0 35.0 18.5 36.5 86-87 30.72321099704181 35.0 32.0 35.0 17.5 36.0 88-89 30.44393095015575 35.0 32.0 35.0 11.5 36.0 90-91 30.23405177170322 34.5 32.0 35.0 7.5 35.5 92-93 30.068458295279825 34.0 31.0 35.0 4.5 35.0 94-95 29.954882963833413 34.0 31.0 35.0 2.0 35.0 96-97 29.74646128275745 34.0 31.0 35.0 2.0 35.0 98-99 29.54131627116167 34.0 31.0 35.0 2.0 35.0 100-101 28.42848351931846 33.0 29.0 34.5 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 61584.0 3 20728.0 4 11162.0 5 8038.0 6 6801.0 7 6862.0 8 7094.0 9 7756.0 10 8664.0 11 9471.0 12 10028.0 13 10487.0 14 11427.0 15 12244.0 16 12710.0 17 13530.0 18 13074.0 19 12126.0 20 11708.0 21 11769.0 22 12651.0 23 14573.0 24 16971.0 25 20756.0 26 24528.0 27 29657.0 28 35867.0 29 43471.0 30 52945.0 31 65464.0 32 83963.0 33 110782.0 34 155717.0 35 233513.0 36 407333.0 37 799727.0 38 890104.0 39 114821.0 40 3.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.01875452104953 19.565635489538725 13.053516483809569 26.362093505602175 2 15.198137335970333 21.134550553902912 37.36771490826468 26.299597201862074 3 17.886763646369772 24.74547635990289 29.193030835166557 28.17472915856078 4 12.873816643633434 16.87068163871169 36.044952822554755 34.21054889510012 5 13.978991326827591 37.391762897974154 34.749210702545014 13.880035072653243 6 33.415886694697924 36.120739542419074 16.89662476967701 13.56674899320599 7 28.738185662060012 31.68294276900538 21.262835015083834 18.31603655385078 8 26.498139557037952 35.40468665359609 19.751315712008104 18.34585807735786 9 26.370333027721887 15.408793030047255 19.192102976560815 39.02877096567004 10-11 25.461544381430485 25.502968825848615 28.1509513266478 20.8845354660731 12-13 25.960223638486223 22.710125564406713 27.901513506413128 23.428137290693936 14-15 23.019678032412738 24.396967221129746 24.93060150686263 27.652753239594887 16-17 23.547583820521766 27.518091872185185 25.622753585757145 23.311570721535904 18-19 23.472964711071967 27.00892840633191 26.774124500063536 22.74398238253259 20-21 24.022487517002098 26.15968918056358 26.706626066259926 23.111197236174398 22-23 23.75171924929048 26.067946329541442 26.42947313237532 23.750861288792755 24-25 23.600635131580933 26.204251547371417 26.46363836197116 23.731474959076497 26-27 23.553234448615555 26.377053940736328 26.441669392261204 23.628042218386913 28-29 23.617554400760255 26.561547683433552 26.247900835405375 23.572997080400814 30-31 23.926338343197123 26.258302552453255 26.208088514004746 23.60727059034488 32-33 23.666411070967676 26.314866778323964 26.13305997464558 23.88566217606278 34-35 23.891711756440365 26.343957329249392 26.27923339642499 23.485097517885258 36-37 23.95752973145132 26.277287823585127 26.23350038143892 23.53168206352463 38-39 23.838033033845953 26.355008078141857 26.223104047828045 23.58385484018415 40-41 23.975676230611604 26.182031523207495 26.21731273443145 23.62497951174946 42-43 23.784989358083944 26.093679336516068 26.190519515160016 23.93081179023997 44-45 23.750873925954988 26.188369173543425 26.26246981016686 23.79828709033473 46-47 23.866569743102257 26.166847584736374 26.078459566216754 23.88812310594462 48-49 23.625758626566366 26.22617013117967 26.218935958189142 23.929135284064817 50-51 23.772624038629523 26.24032712372805 26.175918944510595 23.81112989313183 52-53 23.883737718304275 26.158362499741127 26.12737165054748 23.830528131407117 54-55 23.51594485381788 26.068192482637382 26.39221979418703 24.023642869357705 56-57 23.596437945267937 26.18429177415427 26.241542886408766 23.977727394169026 58-59 23.678036474203708 26.079804260511764 26.283689697638234 23.95846956764629 60-61 23.706722026100852 26.11261175232107 26.33657129610576 23.844094925472316 62-63 23.686737087309 26.10661872464294 26.31824166680106 23.888402521247 64-65 23.447662388822774 25.95587036182562 26.31070814540506 24.285759103946543 66-67 23.40765526174357 26.13560657181946 26.17631077526114 24.28042739117583 68-69 23.54846372260057 26.05454837418258 26.217452016537525 24.17953588667933 70-71 23.476945481502664 25.866425322112235 26.225851666948657 24.430777529436444 72-73 23.44527556433534 26.04356350668472 26.11975525122263 24.39140567775731 74-75 23.363252207960272 26.075689361973502 26.14415244347505 24.41690598659118 76-77 23.395851338005688 25.817428804540164 26.272432728317035 24.51428712913711 78-79 23.36470349607176 25.861766475997864 26.24312381973248 24.530406208197896 80-81 23.44358195522556 26.012220899870332 26.025528299317312 24.5186688455868 82-83 23.34846170998646 26.012206177781334 26.15255044070466 24.486781671527545 84-85 23.351173893886973 25.98864445829407 26.104100211034943 24.556081436784016 86-87 23.23974799502811 26.05980151818178 26.08162051494905 24.61882997184106 88-89 23.195101394830765 25.921859865342956 26.10070334221443 24.78233539761185 90-91 23.107767675928454 25.922741623443674 26.149810689233615 24.81968001139425 92-93 23.18444783343832 25.85970394191559 26.216174854717938 24.739673369928152 94-95 23.087773833231033 25.70635322535858 26.257115310901934 24.948757630508453 96-97 22.953644964841256 25.706218826751858 26.24823555328507 25.091900655121812 98-99 22.807175591038057 25.62756096767227 26.22683849742757 25.33842494386211 100-101 22.782899090885152 25.686495758558692 26.229023925616424 25.301581224939728 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 32.0 1 26.0 2 38.0 3 64.5 4 60.0 5 55.0 6 102.0 7 221.5 8 357.0 9 388.5 10 297.0 11 237.0 12 277.5 13 300.5 14 312.5 15 367.5 16 410.5 17 456.5 18 549.5 19 627.5 20 708.0 21 850.5 22 1023.0 23 1252.5 24 1600.5 25 2075.5 26 2788.5 27 3905.0 28 5630.5 29 8474.5 30 12713.0 31 18733.0 32 27029.0 33 35238.5 34 43093.0 35 52026.0 36 62919.0 37 73767.5 38 83493.0 39 92733.5 40 100489.0 41 108186.5 42 115388.0 43 122907.5 44 131215.5 45 138888.0 46 144208.5 47 148412.5 48 152327.0 49 153347.0 50 151271.0 51 148369.0 52 145159.5 53 141647.0 54 136840.5 55 127793.5 56 115954.0 57 103279.5 58 92049.5 59 80268.0 60 66113.5 61 53725.0 62 43658.5 63 33143.5 64 23428.0 65 17024.5 66 12851.0 67 9835.0 68 7382.0 69 5544.0 70 4238.0 71 3007.0 72 2098.5 73 1567.5 74 1131.5 75 812.0 76 551.0 77 329.5 78 177.0 79 97.5 80 57.0 81 34.0 82 21.5 83 16.5 84 12.0 85 7.5 86 6.5 87 5.0 88 3.0 89 2.5 90 2.5 91 2.5 92 2.5 93 1.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.5 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.16614848811088637 2 1.1833937899635781E-4 3 0.010768883488668562 4 0.006212817397308785 5 0.024792099899736963 6 0.00215969366668353 7 0.0 8 0.0 9 0.0 10-11 0.0493771058862303 12-13 3.25433292239984E-4 14-15 0.00510338571921793 16-17 0.0 18-19 0.0016123740388253752 20-21 3.4022571461452873E-4 22-23 0.0 24-25 6.50866584479968E-4 26-27 0.0033282950342725633 28-29 0.005709875036574265 30-31 0.017040870575475525 32-33 0.012499596906490293 34-35 0.010946392557163096 36-37 0.004275010066243427 38-39 0.0 40-41 0.003638935904138003 42-43 0.009274848828839544 44-45 0.007277871808276006 46-47 0.0037276904383852713 48-49 0.009378395785461355 50-51 0.003062031431530758 52-53 0.002337202735178067 54-55 0.00434897217811615 56-57 0.007751229324261436 58-59 0.015236195045781067 60-61 0.007618097522890534 62-63 0.022173841139442544 64-65 0.04088625544324162 66-67 0.06152168465573152 68-69 0.05122615868304839 70-71 0.0699829502539711 72-73 0.033549213945467435 74-75 0.027084925367791394 76-77 0.22840979388534513 78-79 0.08761551772442841 80-81 0.06771970963066576 82-83 0.027173679902038658 84-85 0.05202494949127381 86-87 0.0685924625507639 88-89 0.29121841928766207 90-91 0.29552301419865457 92-93 0.05482071732006275 94-95 0.00998488510281769 96-97 0.015043893554911987 98-99 0.0011538089452144886 100-101 2.3667875799271562E-4 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 3380109.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 62.924399997584636 #Duplication Level Percentage of deduplicated Percentage of total 1 79.81528845190427 50.223291364702206 2 11.530666068693908 14.51120487890144 3 3.644246914535284 6.879361516205454 4 1.6021378206795123 4.032542443187846 5 0.8771245728020889 2.7596268733354594 6 0.5615601499553133 2.1201501299095042 7 0.39053854987653047 1.7202082748835223 8 0.2652074315398214 1.3350414803635011 9 0.21484089307874354 1.2166860862732654 >10 1.0366810808101543 11.392715730931286 >50 0.04800794843206832 2.0228664144767237 >100 0.012851842444047079 1.3579823435980187 >500 7.068960413299434E-4 0.3242072485746683 >1k 1.413792068798923E-4 0.10411521465698736 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 5.9169689498178905E-5 2 0.0 0.0 0.0 0.0 5.9169689498178905E-5 3 0.0 0.0 0.0 0.0 5.9169689498178905E-5 4 0.0 0.0 0.0 0.0 5.9169689498178905E-5 5 0.0 0.0 0.0 0.0 8.875453424726836E-5 6 0.0 0.0 0.0 0.0 1.4792422374544726E-4 7 0.0 0.0 0.0 0.0 1.4792422374544726E-4 8 0.0 0.0 0.0 0.0 1.775090684945367E-4 9 0.0 0.0 0.0 0.0 2.3667875799271562E-4 10-11 0.0 0.0 0.0 2.9584844749089452E-5 2.5147118036726037E-4 12-13 0.0 0.0 0.0 2.9584844749089452E-5 3.106408698654393E-4 14-15 0.0 0.0 0.0 2.9584844749089452E-5 3.698105593636182E-4 16-17 0.0 0.0 0.0 2.9584844749089452E-5 4.1418782648725233E-4 18-19 0.0 0.0 0.0 2.9584844749089452E-5 4.437726712363418E-4 20-21 0.0 0.0 0.0 2.9584844749089452E-5 5.325272054836101E-4 22-23 0.0 0.0 0.0 1.4792422374544726E-4 5.621120502326995E-4 24-25 0.0 0.0 0.0 2.5147118036726037E-4 6.212817397308786E-4 26-27 0.0 0.0 0.0 3.846029817381629E-4 6.212817397308786E-4 28-29 0.0 0.0 0.0 0.0020709391324362615 6.360741621054232E-4 30-31 0.0 0.0 0.0 0.00917130187221773 6.804514292290573E-4 32-33 0.0 0.0 0.0 0.026463643628060515 7.396211187272364E-4 34-35 0.0 0.0 0.0 0.05246872216251015 7.987908082254153E-4 36-37 0.0 0.0 0.0 0.09579572729755165 7.987908082254153E-4 38-39 0.0 0.0 0.0 0.16784961668395904 8.431680753490494E-4 40-41 0.0 0.0 0.0 0.253660458878693 8.727529200981388E-4 42-43 0.0 0.0 0.0 0.3467491728817029 9.17130187221773E-4 44-45 1.4792422374544726E-5 0.0 0.0 0.4536688018049122 9.467150319708625E-4 46-47 2.9584844749089452E-5 0.0 0.0 0.5823480840410767 9.910922990944968E-4 48-49 2.9584844749089452E-5 0.0 0.0 0.7199176121243427 0.0010354695662181308 50-51 2.9584844749089452E-5 0.0 0.0 0.8692027387282482 0.0010354695662181308 52-53 2.9584844749089452E-5 0.0 0.0 1.0230143465787642 0.0011094316780908544 54-55 2.9584844749089452E-5 0.0 0.0 1.19746138364177 0.0011242241004653993 56-57 2.9584844749089452E-5 0.0 0.0 1.4005909276890183 0.0011538089452144888 58-59 2.9584844749089452E-5 0.0 0.0 1.619814627279771 0.001183393789963578 60-61 2.9584844749089452E-5 0.0 0.0 1.8509462268820327 0.001183393789963578 62-63 2.9584844749089452E-5 0.0 0.0 2.0920035418976135 0.001183393789963578 64-65 5.9169689498178905E-5 0.0 0.0 2.3461521507146665 0.001183393789963578 66-67 5.9169689498178905E-5 0.0 0.0 2.6433467086416442 0.0011981862123381227 68-69 5.9169689498178905E-5 0.0 0.0 2.964800839262876 0.0012129786347126676 70-71 5.9169689498178905E-5 0.0 0.0 3.305440741703892 0.001286940746585391 72-73 5.9169689498178905E-5 0.0 0.0 3.6656806037911793 0.0014348649703308384 74-75 5.9169689498178905E-5 0.0 0.0 4.045934613351227 0.001508827082203562 76-77 5.9169689498178905E-5 0.0 0.0 4.465151863445824 0.001567996771701741 78-79 5.9169689498178905E-5 0.0 0.0 4.935891120670961 0.0016271664611999198 80-81 5.9169689498178905E-5 0.0 0.0 5.428286484252431 0.0016271664611999198 82-83 5.9169689498178905E-5 0.0 0.0 5.940740372573784 0.0016567513059490093 84-85 5.9169689498178905E-5 0.0 0.0 6.46544238662126 0.001671543728323554 86-87 5.9169689498178905E-5 0.0 0.0 7.02459595237905 0.001730713417821733 88-89 5.9169689498178905E-5 0.0 0.0 7.639709251979744 0.0017750906849453671 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 2325 0.0 40.48078 1 GTATCAA 3820 0.0 39.197094 1 TCAACGC 4380 0.0 33.59019 4 CAACGCA 4565 0.0 32.35827 5 ATCAACG 4730 0.0 31.003862 3 AACGCAG 5030 0.0 29.456526 6 TATCAAC 5025 0.0 29.183737 2 GTACATG 8090 0.0 25.206669 1 TACATGG 8455 0.0 23.631264 2 ACGCAGA 6210 0.0 23.629543 7 CGCAGAG 6440 0.0 22.121973 8 ACATGGG 8640 0.0 22.081612 3 CATGGGG 7410 0.0 19.470642 4 GAGTACA 6245 0.0 18.191652 1 TATACCG 370 1.4188117E-10 17.971815 5 GCAGAGT 7655 0.0 17.804573 9 TATATAC 1275 0.0 17.494686 3 GTATATA 1215 0.0 17.214048 1 ATGGGGG 4160 0.0 17.012125 5 AGAGTAC 6270 0.0 17.003712 10-11 >>END_MODULE