##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921697_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3096483 Sequences flagged as poor quality 0 Sequence length 101 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.27038546635005 33.0 31.0 34.0 28.0 34.0 2 31.409699649570175 34.0 31.0 34.0 28.0 34.0 3 31.48409308237765 34.0 31.0 34.0 28.0 34.0 4 34.95673575472561 37.0 35.0 37.0 32.0 37.0 5 34.690805665653585 37.0 35.0 37.0 32.0 37.0 6 34.66228330657717 37.0 35.0 37.0 32.0 37.0 7 34.54675578713011 37.0 35.0 37.0 32.0 37.0 8 34.49037827754908 37.0 35.0 37.0 31.0 37.0 9 36.074749966332774 39.0 37.0 39.0 31.0 39.0 10-11 35.959282030613444 39.0 37.0 39.0 31.0 39.0 12-13 35.886112082643436 39.0 37.0 39.0 30.5 39.0 14-15 37.1250279752868 40.0 38.0 41.0 31.0 41.0 16-17 37.0881078630175 40.0 38.0 41.0 31.0 41.0 18-19 37.05020679913308 40.0 38.0 41.0 31.0 41.0 20-21 36.990281231965426 40.0 38.0 41.0 31.0 41.0 22-23 36.89914493313866 40.0 37.0 41.0 30.0 41.0 24-25 36.81663358074306 40.0 37.0 41.0 30.0 41.0 26-27 36.69631514204987 40.0 37.0 41.0 30.0 41.0 28-29 36.57569345609196 40.0 37.0 41.0 30.0 41.0 30-31 36.42136417348327 40.0 37.0 41.0 29.5 41.0 32-33 36.36936534125975 40.0 36.5 41.0 29.5 41.0 34-35 36.4992275106952 40.0 37.0 41.0 30.0 41.0 36-37 36.49285625013927 40.0 37.0 41.0 30.0 41.0 38-39 36.38996177275961 40.0 37.0 41.0 29.5 41.0 40-41 36.312083902931164 40.0 37.0 41.0 29.0 41.0 42-43 36.19100976817893 40.0 36.5 41.0 28.5 41.0 44-45 36.06673086853698 40.0 36.0 41.0 28.0 41.0 46-47 35.92067112914878 40.0 36.0 41.0 28.0 41.0 48-49 35.7824969489579 40.0 36.0 41.0 27.0 41.0 50-51 35.63126279072095 40.0 35.0 41.0 27.0 41.0 52-53 35.45835743325573 39.0 35.0 41.0 26.5 41.0 54-55 35.25640734988695 39.0 35.0 41.0 26.0 41.0 56-57 35.03855922993925 39.0 35.0 41.0 26.0 41.0 58-59 34.80983409242034 39.0 35.0 40.5 26.0 41.0 60-61 34.54612975430513 38.0 34.5 40.0 25.0 41.0 62-63 34.252622572124565 37.5 34.0 40.0 24.0 41.0 64-65 33.92373686534045 37.0 34.0 40.0 23.0 41.0 66-67 33.582265105282346 36.5 34.0 39.5 22.5 41.0 68-69 33.22562985167366 36.0 34.0 39.0 22.0 41.0 70-71 32.83023497949125 35.5 33.0 39.0 21.5 40.0 72-73 32.465161119889885 35.0 33.0 38.0 20.0 40.0 74-75 32.05182379493122 35.0 33.0 37.0 19.0 39.0 76-77 29.33833981972451 33.0 29.0 34.5 12.0 36.5 78-79 30.893448631883334 34.5 31.5 36.0 14.0 38.0 80-81 31.064505440527206 35.0 32.0 36.0 15.5 37.0 82-83 30.875198572057396 35.0 32.0 35.0 12.5 37.0 84-85 30.661271029099787 35.0 32.0 35.0 9.5 36.5 86-87 30.444110786334043 35.0 32.0 35.0 7.0 36.0 88-89 30.165993483574752 35.0 31.5 35.0 2.0 36.0 90-91 29.961712368516153 34.0 31.0 35.0 2.0 35.5 92-93 29.79780754488237 34.0 31.0 35.0 2.0 35.0 94-95 29.686407772947568 34.0 31.0 35.0 2.0 35.0 96-97 29.480391463476465 34.0 31.0 35.0 2.0 35.0 98-99 29.272946274854405 34.0 31.0 35.0 2.0 35.0 100-101 28.15695128957595 33.0 28.5 34.5 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 65627.0 3 21261.0 4 11257.0 5 8017.0 6 6810.0 7 6871.0 8 6995.0 9 7751.0 10 8422.0 11 9123.0 12 9659.0 13 10577.0 14 11186.0 15 12013.0 16 12768.0 17 13436.0 18 13098.0 19 11808.0 20 11324.0 21 11438.0 22 11965.0 23 13638.0 24 15875.0 25 19135.0 26 22540.0 27 27329.0 28 33158.0 29 39970.0 30 48467.0 31 59924.0 32 75957.0 33 100925.0 34 141136.0 35 210832.0 36 370987.0 37 723794.0 38 806624.0 39 104785.0 40 1.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.50819056984628 19.758682262822834 13.448741007194245 26.28438616013664 2 14.879259597516919 21.011646134737596 37.64567356848652 26.463420699258965 3 17.495231186522133 24.853738084425924 29.344109699827982 28.306921029223957 4 12.644515647915522 17.17170640614852 36.15173767581923 34.03204027011673 5 13.776829510563829 37.39842782177242 35.0103449779614 13.814397689702346 6 33.275815296374525 36.361217147544586 17.02511287228477 13.337854683796127 7 28.43299963216333 31.780571700216022 21.55032015354194 18.236108514078715 8 26.355998079111043 35.24501829979367 20.01067016999609 18.388313451099197 9 26.315573609018234 15.420015359365888 19.364846945662855 38.899564085953024 10-11 25.23548186928945 25.537066675799725 28.365175452470105 20.862276002440723 12-13 25.84766549059818 22.882115954432056 27.917890504525307 23.352328050444456 14-15 22.927624859410287 24.503376171648235 25.13502668075861 27.433972288182872 16-17 23.396369913280633 27.482893896542286 25.88118938182276 23.23954680835432 18-19 23.310839723746827 26.966592226221447 26.987680994433923 22.73488705559781 20-21 23.911682886169384 26.182779273742618 26.87538874811964 23.030149091968358 22-23 23.64235489101668 26.1415128066261 26.55469124164415 23.661441060713074 24-25 23.463516024219846 26.216409723462437 26.693404648972752 23.626669603344972 26-27 23.37496288026234 26.452522180203875 26.55317136989958 23.619343569634204 28-29 23.503128153445605 26.624014897706644 26.368614567863 23.504242380984756 30-31 23.71975473193367 26.38850734320006 26.306400325973257 23.58533759889301 32-33 23.49351769311267 26.397797888970715 26.207414441300724 23.901269976615893 34-35 23.814932175947533 26.38767278185037 26.331280584127565 23.466114458074532 36-37 23.923154620080595 26.1550907964949 26.340018360342306 23.581736223082196 38-39 23.631342397164783 26.349361517566866 26.332600566513687 23.686695518754664 40-41 23.903388441789588 26.17014906766904 26.387693496177313 23.538768994364062 42-43 23.72282535411559 26.155630475361814 26.22101708885361 23.900527081668997 44-45 23.700363712936944 26.20972944621423 26.351755609710487 23.738151231138335 46-47 23.857539980186523 26.227212282740076 26.11569487247598 23.79955286459742 48-49 23.576356126029218 26.321091357086075 26.201946018990586 23.900606497894124 50-51 23.725151567264863 26.332746360891974 26.188288163906602 23.75381390793656 52-53 23.903484054655358 26.199473521204 26.13163713848989 23.765405285650758 54-55 23.510207008051083 26.14567848045749 26.363709176569984 23.980405334921436 56-57 23.565100264498614 26.228770389074086 26.27489091188316 23.93123843454414 58-59 23.552195384602715 26.116837932995296 26.354886528823503 23.97608015357849 60-61 23.548084233399454 26.214984300383627 26.419311852322192 23.817619613894724 62-63 23.570784272081905 26.141013766087152 26.38585905406704 23.902342907763906 64-65 23.33112132183087 26.114362717763058 26.315543763904497 24.238972196501578 66-67 23.33790414036918 26.179527534628832 26.23751490278593 24.245053422216063 68-69 23.542108919368648 26.07972665148064 26.220875943068545 24.157288486082166 70-71 23.411762709865165 25.92528917180162 26.218221802467202 24.444726315866014 72-73 23.39278930147933 26.023500253274477 26.15711546214839 24.426594983097804 74-75 23.36547787582747 26.13314963485081 26.06100006379915 24.440372425522565 76-77 23.4524299843587 25.861238308474217 26.205945634961413 24.480386072205665 78-79 23.358203564189 25.88721304247979 26.220922443310695 24.533660950020515 80-81 23.454961274054053 25.987021225508872 26.076520543155347 24.481496957281728 82-83 23.47435508757739 25.940909994674755 26.15232068008051 24.432414237667345 84-85 23.38452386953021 25.9493173948951 26.088707644944538 24.577451090630156 86-87 23.358469774062876 25.986372354331717 26.063074315426515 24.592083556178896 88-89 23.23756991970772 25.874939675527216 26.08357328168371 24.803917123081355 90-91 23.195408214742823 25.887531967248822 26.14424166827134 24.772818149737013 92-93 23.294543022348453 25.690785806720527 26.23330085997845 24.781370310952568 94-95 23.1245164406544 25.62853631158251 26.25900645682432 24.987940790938772 96-97 23.092563534919417 25.502339459705286 26.299525777338218 25.105571228037082 98-99 22.968572125220614 25.489131926670982 26.208745161806 25.3335507863024 100-101 22.90012301068407 25.464438802911303 26.28294911736847 25.352489069036153 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 17.0 1 18.0 2 28.5 3 44.0 4 45.5 5 53.0 6 100.0 7 205.5 8 297.5 9 317.0 10 274.0 11 236.0 12 272.0 13 303.0 14 326.0 15 366.5 16 400.5 17 464.0 18 533.0 19 606.0 20 721.5 21 892.5 22 1079.5 23 1370.0 24 1806.5 25 2304.0 26 3104.5 27 4425.5 28 6306.0 29 9293.5 30 13675.0 31 19444.5 32 27358.5 33 34406.5 34 40525.5 35 48316.5 36 57885.0 37 67797.5 38 76541.5 39 84631.0 40 92513.0 41 100561.5 42 107192.0 43 112807.5 44 118858.0 45 124887.0 46 130018.5 47 133763.5 48 135853.0 49 136178.0 50 135014.5 51 133107.0 52 130975.5 53 128524.0 54 124211.5 55 116776.0 56 107949.5 57 97331.0 58 86749.0 59 74779.5 60 60576.5 61 49291.0 62 40019.5 63 30127.0 64 21253.0 65 15417.5 66 11651.0 67 9052.0 68 6763.5 69 4846.0 70 3581.0 71 2648.5 72 1883.5 73 1356.0 74 1056.5 75 796.5 76 540.5 77 318.5 78 185.0 79 106.5 80 55.5 81 35.5 82 25.0 83 16.5 84 12.0 85 8.5 86 6.0 87 4.0 88 5.0 89 4.0 90 2.0 91 2.5 92 1.5 93 1.0 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.16544576540546163 2 1.6147351688996839E-4 3 0.010495778597847946 4 0.0062005830485747865 5 0.02512527922807908 6 0.0020345663128136016 7 0.0 8 0.0 9 3.229470337799368E-5 10-11 0.048425907715301524 12-13 2.5835762702394944E-4 14-15 0.004860352858388048 16-17 1.614735168899684E-5 18-19 0.0015501457621436966 20-21 1.6147351688996839E-4 22-23 0.0 24-25 4.521258472919115E-4 26-27 0.002728902435440466 28-29 0.005409362815813942 30-31 0.01690627721837969 32-33 0.011722977326211706 34-35 0.01001135804717804 36-37 0.004375932307718143 38-39 0.0 40-41 0.003358649151311343 42-43 0.009155548407661208 44-45 0.007185571501603593 46-47 0.003407091206378333 48-49 0.008541949043479328 50-51 0.0027611971388184593 52-53 0.002002271609435608 54-55 0.004198311439139178 56-57 0.007992939086053436 58-59 0.015388426159613987 60-61 0.007395487073560553 62-63 0.02100770454738489 64-65 0.04072362095965003 66-67 0.05953528567733135 68-69 0.049507780278464315 70-71 0.06735060389480581 72-73 0.03316666036919951 74-75 0.02682075115542375 76-77 0.22301107417673532 78-79 0.08472515431216641 80-81 0.06607496311137506 82-83 0.02743435051960563 84-85 0.05086415782034004 86-87 0.06581660548435112 88-89 0.291072161545857 90-91 0.29528662033668523 92-93 0.05289872413315364 94-95 0.009736853068465095 96-97 0.015146215884279035 98-99 9.04251694583823E-4 100-101 1.2917881351197472E-4 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 3096483.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 62.28386830857785 #Duplication Level Percentage of deduplicated Percentage of total 1 77.58727317561546 48.32435504891688 2 12.853394701955509 16.011182858695385 3 4.1895985501947095 7.828332130984079 4 1.8720684317503153 4.6639865467113 5 1.0039601992486653 3.126526241852872 6 0.6253667188660295 2.337015501745152 7 0.3879347470277085 1.6913453687336681 8 0.2776643917067932 1.3835209925637824 9 0.20590049982269404 1.154185165406433 >10 0.9485496161474495 9.990719176465698 >50 0.0365509310475674 1.5115074254697125 >100 0.010179458644772602 1.0882527061171408 >500 9.870993829718731E-4 0.4381608749878913 >1k 5.714785893495798E-4 0.4509099613500733 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 3.229470337799368E-5 9.688411013398104E-5 2 0.0 0.0 0.0 3.229470337799368E-5 9.688411013398104E-5 3 0.0 0.0 0.0 3.229470337799368E-5 9.688411013398104E-5 4 0.0 0.0 0.0 3.229470337799368E-5 9.688411013398104E-5 5 0.0 3.229470337799368E-5 0.0 3.229470337799368E-5 9.688411013398104E-5 6 0.0 3.229470337799368E-5 0.0 3.229470337799368E-5 1.9376822026796208E-4 7 0.0 3.229470337799368E-5 0.0 3.229470337799368E-5 1.9376822026796208E-4 8 0.0 3.229470337799368E-5 0.0 3.229470337799368E-5 2.2606292364595574E-4 9 0.0 3.229470337799368E-5 0.0 3.229470337799368E-5 2.2606292364595574E-4 10-11 0.0 3.229470337799368E-5 0.0 6.458940675598736E-5 2.2606292364595574E-4 12-13 0.0 4.844205506699052E-5 0.0 6.458940675598736E-5 2.9065233040194313E-4 14-15 0.0 6.458940675598736E-5 0.0 6.458940675598736E-5 3.5524173715793046E-4 16-17 0.0 6.458940675598736E-5 0.0 6.458940675598736E-5 3.8753644053592416E-4 18-19 0.0 6.458940675598736E-5 0.0 6.458940675598736E-5 4.198311439139178E-4 20-21 0.0 6.458940675598736E-5 0.0 9.688411013398104E-5 4.198311439139178E-4 22-23 0.0 6.458940675598736E-5 0.0 1.2917881351197472E-4 4.844205506699052E-4 24-25 0.0 8.07367584449842E-5 0.0 2.5835762702394944E-4 5.167152540478989E-4 26-27 0.0 9.688411013398104E-5 0.0 5.490099574258925E-4 5.813046608038863E-4 28-29 0.0 9.688411013398104E-5 0.0 0.0022121871813925668 5.813046608038863E-4 30-31 0.0 9.688411013398104E-5 0.0 0.011060935906962836 5.813046608038863E-4 32-33 0.0 9.688411013398104E-5 0.0 0.031180536111452897 6.458940675598735E-4 34-35 0.0 9.688411013398104E-5 0.0 0.05880865485132648 6.781887709378673E-4 36-37 0.0 9.688411013398104E-5 0.0 0.10240650441161796 6.781887709378673E-4 38-39 0.0 9.688411013398104E-5 0.0 0.1772979215451853 6.781887709378673E-4 40-41 0.0 9.688411013398104E-5 0.0 0.2610703821077009 6.781887709378673E-4 42-43 0.0 1.2917881351197472E-4 0.0 0.35143096215932723 6.943361226268641E-4 44-45 0.0 1.2917881351197472E-4 0.0 0.4594083029036491 7.266308260048577E-4 46-47 0.0 1.614735168899684E-4 0.0 0.5824834174771829 8.07367584449842E-4 48-49 0.0 1.9376822026796208E-4 0.0 0.7197359068336562 9.04251694583823E-4 50-51 0.0 1.9376822026796208E-4 0.0 0.8657241134538766 9.365463979618167E-4 52-53 0.0 1.9376822026796208E-4 0.0 1.0177675769574708 0.0010657252114737914 54-55 0.0 1.9376822026796208E-4 0.0 1.185538561006148 0.0011787566732967695 56-57 0.0 1.9376822026796208E-4 0.0 1.3806470114642968 0.0012110513766747629 58-59 0.0 1.9376822026796208E-4 0.0 1.5905948781246337 0.0012271987283637598 60-61 0.0 2.422102753349526E-4 0.0 1.8113937651199765 0.0012271987283637598 62-63 0.0 2.5835762702394944E-4 0.0 2.038344793108827 0.0012271987283637598 64-65 0.0 2.5835762702394944E-4 0.0 2.2832516761758423 0.001307935486808744 66-67 0.0 2.5835762702394944E-4 0.0 2.5601949049938266 0.0013240828384977407 68-69 0.0 2.5835762702394944E-4 0.0 2.8673982708769916 0.0013402301901867376 70-71 0.0 2.5835762702394944E-4 0.0 3.19289658622379 0.0013563775418757346 72-73 0.0 2.5835762702394944E-4 0.0 3.532443097540016 0.0016308825205886808 74-75 0.0 2.9065233040194313E-4 0.0 3.8854403528131756 0.0016631772239666743 76-77 0.0 3.2294703377993677E-4 0.0 4.274946770255157 0.0016793245756556712 78-79 0.0 3.2294703377993677E-4 0.0 4.713557284183379 0.0016793245756556712 80-81 0.0 3.3909438546893364E-4 0.0 5.175533016005578 0.0017923560374786492 82-83 0.0 3.5524173715793046E-4 0.0 5.66082552366669 0.0020022716094356082 84-85 0.0 3.8753644053592416E-4 0.0 6.158196250391169 0.0020022716094356082 86-87 0.0 3.8753644053592416E-4 0.0 6.686844397337238 0.002050713664502599 88-89 0.0 3.8753644053592416E-4 0.0 7.260010792889869 0.002099155719569589 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 2150 0.0 42.45195 1 GTATCAA 3445 0.0 40.016922 1 TCAACGC 4060 0.0 33.201153 4 CAACGCA 4235 0.0 31.84927 5 ATCAACG 4300 0.0 31.458956 3 AACGCAG 4575 0.0 29.476612 6 TATCAAC 4670 0.0 29.270926 2 GTACATG 7015 0.0 25.954102 1 TACATGG 7440 0.0 24.050787 2 ACGCAGA 5680 0.0 23.32417 7 CGCAGAG 5935 0.0 22.322037 8 ACATGGG 7680 0.0 21.93992 3 CATGGGG 6080 0.0 19.047901 4 GGACCGT 445 0.0 18.140083 6 GCAGAGT 7445 0.0 16.455282 9 AGAGTAC 5965 0.0 16.438416 10-11 GTATTAA 2015 0.0 16.042377 1 GAGTACA 5265 0.0 15.529767 1 TATACTG 1390 0.0 15.3756075 5 GTATTAG 930 0.0 15.334626 1 >>END_MODULE