##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921696_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2268147 Sequences flagged as poor quality 0 Sequence length 101 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.259534765603817 33.0 31.0 34.0 28.0 34.0 2 31.39637289822926 34.0 31.0 34.0 28.0 34.0 3 31.472979485015742 34.0 31.0 34.0 28.0 34.0 4 34.932652954151564 37.0 35.0 37.0 32.0 37.0 5 34.668605694428095 37.0 35.0 37.0 32.0 37.0 6 34.64007315222514 37.0 35.0 37.0 32.0 37.0 7 34.529806048726115 37.0 35.0 37.0 32.0 37.0 8 34.476387112475514 37.0 35.0 37.0 31.0 37.0 9 36.061349639154784 39.0 37.0 39.0 31.0 39.0 10-11 35.948039963900044 39.0 37.0 39.0 31.0 39.0 12-13 35.8659044144846 39.0 37.0 39.0 30.0 39.0 14-15 37.113849102372996 40.0 38.0 41.0 31.0 41.0 16-17 37.080709054571855 40.0 38.0 41.0 31.0 41.0 18-19 37.03967181139494 40.0 38.0 41.0 31.0 41.0 20-21 36.98353678134618 40.0 38.0 41.0 31.0 41.0 22-23 36.89267737055843 40.0 37.5 41.0 30.0 41.0 24-25 36.814950706457736 40.0 37.0 41.0 30.0 41.0 26-27 36.6920891811686 40.0 37.0 41.0 30.0 41.0 28-29 36.580459732107315 40.0 37.0 41.0 30.0 41.0 30-31 36.426766430923564 40.0 37.0 41.0 30.0 41.0 32-33 36.37471446956481 40.0 37.0 41.0 29.5 41.0 34-35 36.51015652865533 40.0 37.0 41.0 30.0 41.0 36-37 36.51075481439254 40.0 37.0 41.0 30.0 41.0 38-39 36.407474471451806 40.0 37.0 41.0 29.5 41.0 40-41 36.328841560974666 40.0 37.0 41.0 29.0 41.0 42-43 36.21201381568302 40.0 37.0 41.0 29.0 41.0 44-45 36.087492345072874 40.0 36.0 41.0 28.0 41.0 46-47 35.93790371611716 40.0 36.0 41.0 28.0 41.0 48-49 35.8022334972116 40.0 36.0 41.0 27.0 41.0 50-51 35.651691005918046 40.0 35.5 41.0 27.0 41.0 52-53 35.486490954951336 39.5 35.0 41.0 26.5 41.0 54-55 35.283780769059504 39.0 35.0 41.0 26.0 41.0 56-57 35.06748085551774 39.0 35.0 41.0 26.0 41.0 58-59 34.833286158260464 39.0 35.0 41.0 26.0 41.0 60-61 34.56630544669283 38.0 34.5 40.0 25.0 41.0 62-63 34.270275030674824 38.0 34.0 40.0 24.0 41.0 64-65 33.94125513028918 37.0 34.0 40.0 23.0 41.0 66-67 33.598827589217095 36.5 34.0 39.5 22.5 41.0 68-69 33.24408029991001 36.0 34.0 39.0 22.0 41.0 70-71 32.84613827939724 35.5 33.0 39.0 21.5 40.0 72-73 32.48462665779599 35.0 33.0 38.0 20.0 40.0 74-75 32.08285441816602 35.0 33.0 37.0 19.5 39.0 76-77 29.392462437399338 33.0 29.0 34.5 13.0 36.5 78-79 30.94269044290339 34.5 31.5 36.0 14.5 38.0 80-81 31.10801239954906 35.0 32.0 36.0 17.0 37.0 82-83 30.917105240533353 35.0 32.0 35.0 13.0 37.0 84-85 30.70810357529737 35.0 32.0 35.0 10.5 36.5 86-87 30.489874113097606 35.0 32.0 35.0 7.0 36.0 88-89 30.216705971879247 35.0 32.0 35.0 2.0 36.0 90-91 30.017372551249984 34.5 31.0 35.0 2.0 35.5 92-93 29.85837161348008 34.0 31.0 35.0 2.0 35.0 94-95 29.752655140958677 34.0 31.0 35.0 2.0 35.0 96-97 29.547906066053038 34.0 31.0 35.0 2.0 35.0 98-99 29.348180695519297 34.0 31.0 35.0 2.0 35.0 100-101 28.24640378247089 33.0 29.0 34.5 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 50504.0 3 16042.0 4 8377.0 5 5793.0 6 5018.0 7 4860.0 8 5117.0 9 5473.0 10 6176.0 11 6603.0 12 6868.0 13 7476.0 14 7976.0 15 8612.0 16 9331.0 17 9866.0 18 9171.0 19 8231.0 20 8129.0 21 7995.0 22 8552.0 23 9601.0 24 11220.0 25 13524.0 26 16078.0 27 19350.0 28 23394.0 29 28297.0 30 34481.0 31 42837.0 32 54576.0 33 71501.0 34 101398.0 35 153246.0 36 270911.0 37 538056.0 38 594696.0 39 78808.0 40 3.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.4997063408301 19.59470618627265 13.90716837489457 25.998419098002678 2 14.639760685494094 20.603665109593962 38.35023774935024 26.406336455561704 3 17.737141405843857 24.77822179716295 28.749086717823698 28.735550079169492 4 12.670056141950555 17.137514489632057 35.880539735211755 34.31188963320563 5 14.119340983057127 37.21681763258394 34.540972473342094 14.122868911016836 6 33.49944953707766 36.1377475595115 16.8559374381363 13.506865465274542 7 28.8853852946921 31.461629250661442 21.026855843117755 18.626129611528704 8 26.285289269169944 35.84952827131575 19.340413121371764 18.524769338142548 9 26.002647095910053 16.0163410997352 19.23615146467644 38.74486033967831 10-11 25.463084367843823 25.66863743240403 27.85491041349028 21.013367786261867 12-13 26.07294964155652 22.755672048462618 27.753158976077312 23.41821933390355 14-15 22.99409997308249 24.447623400023062 24.909894686624863 27.648381940269584 16-17 23.505778837478093 27.574299102813686 25.57319379502162 23.346728264686607 18-19 23.470881405790916 26.921186153721344 26.765461372141665 22.842471068346075 20-21 24.027397755519715 26.049096573318604 26.77420549507041 23.149300176091266 22-23 23.716275885116794 25.923496140241355 26.500068117278115 23.86015985736374 24-25 23.583093010223855 26.196063977017157 26.52970931521912 23.691133697539865 26-27 23.51612376988466 26.2985653063384 26.502151599590846 23.683159324186096 28-29 23.638154555960362 26.413807364792085 26.32575649016956 23.622281589077986 30-31 23.802936614415845 26.22505371519536 26.276977485368192 23.695032185020597 32-33 23.554357464525037 26.255882730336477 26.20819474863385 23.981565056504635 34-35 23.84692344629044 26.319198592890107 26.28906072592796 23.544817234891493 36-37 23.90772624391246 26.16659953867972 26.219838976603526 23.705835240804294 38-39 23.782298942705214 26.24986387566591 26.247438988742793 23.720398192886087 40-41 23.982141554108942 26.09191958673024 26.24145276676065 23.684486092400174 42-43 23.7502006240068 26.08711755773121 26.25487009264861 23.90781172561338 44-45 23.84016388292477 26.152924621041677 26.246488860806878 23.76042263522667 46-47 23.933533211348955 26.2382883975221 25.981702343422764 23.84647604770618 48-49 23.750923755553558 26.219930544164775 26.07594372983832 23.95320197044335 50-51 23.8340348083267 26.29078453210163 26.087286239714857 23.787894419856812 52-53 24.021473560480253 26.153971301422363 26.006666838617402 23.817888299479982 54-55 23.660675312581844 26.09682519666709 26.259167583020805 23.983331907730264 56-57 23.74986358901437 26.244062677403175 26.075387048948116 23.930686684634335 58-59 23.810796288983738 26.179910516346656 26.122585946617153 23.886707248052453 60-61 23.737649202745537 26.17191754215552 26.2249164561628 23.86551679893614 62-63 23.760976207779745 26.17166277420675 26.19534386531853 23.87201715269497 64-65 23.56596748070755 26.022976277430214 26.20904213464314 24.2020141072191 66-67 23.569312255210342 26.23494425038227 26.057972190924243 24.13777130348315 68-69 23.72105589931969 26.078445860181677 26.10890491855345 24.09159332194519 70-71 23.616391153427436 25.911995332066347 26.121258180189738 24.350355334316482 72-73 23.580643603427664 26.05822284761516 26.047174827096274 24.3139587218609 74-75 23.518092086766867 26.177071074645504 25.96234351602375 24.34249332256388 76-77 23.567003530374077 25.925955386217797 26.170748316454794 24.33629276695333 78-79 23.532605697971757 25.957122905952357 26.138833179995984 24.371438216079902 80-81 23.62052721245629 26.118606368224572 25.929709564822616 24.33115685449652 82-83 23.627787533969038 26.1246938266095 25.974881654116906 24.272636985304562 84-85 23.68945576438314 26.079541908059156 25.933311380374274 24.29769094718343 86-87 23.545009494631476 26.107346691703313 25.959522515336126 24.388121298329086 88-89 23.5028184880434 26.00216900315401 25.963984819188934 24.53102768961366 90-91 23.383347491899546 26.073180255720953 25.97321532415304 24.57025692822646 92-93 23.4124653361421 25.98848100123933 26.1211261560409 24.477927506577668 94-95 23.332652829960725 25.89113239435626 26.103131976353755 24.673082799329254 96-97 23.274251448421893 25.824704241487282 26.149378277662223 24.7516660324286 98-99 23.20273706556855 25.826382834260496 26.083004775976605 24.88787532419435 100-101 23.21416525692186 25.801438270372078 26.088435419138406 24.895961053567657 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 14.0 1 13.5 2 22.5 3 28.0 4 25.0 5 33.0 6 50.5 7 120.5 8 190.0 9 207.0 10 204.5 11 203.0 12 195.5 13 198.0 14 248.0 15 289.0 16 316.0 17 359.5 18 412.5 19 474.0 20 577.5 21 675.5 22 824.5 23 1081.0 24 1373.0 25 1820.0 26 2500.5 27 3481.5 28 4915.0 29 6971.5 30 10043.5 31 14255.0 32 19915.5 33 24976.5 34 29265.0 35 34594.5 36 41375.0 37 48271.0 38 54316.5 39 60309.0 40 65781.5 41 71149.5 42 76336.5 43 80641.5 44 85668.5 45 91326.5 46 94723.5 47 97495.0 48 100226.5 49 100308.0 50 98400.0 51 96911.0 52 95988.5 53 95157.0 54 93301.5 55 88225.5 56 80476.5 57 72107.5 58 64458.0 59 56088.0 60 46412.0 61 38046.5 62 30631.0 63 22916.0 64 16361.0 65 11759.5 66 8676.5 67 6503.5 68 4758.0 69 3473.5 70 2588.5 71 1858.5 72 1324.0 73 1000.5 74 710.0 75 457.0 76 295.5 77 177.0 78 100.0 79 62.0 80 39.0 81 17.0 82 14.0 83 12.5 84 9.5 85 6.0 86 6.0 87 5.0 88 3.0 89 4.0 90 3.0 91 2.0 92 2.0 93 2.0 94 2.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.15946938183459888 2 8.817770629505054E-5 3 0.010052258517635762 4 0.00643697255953869 5 0.023234825608745818 6 0.0024689757762614154 7 0.0 8 0.0 9 4.408885314752527E-5 10-11 0.04816707206367136 12-13 3.086219720326769E-4 14-15 0.004695462860211441 16-17 2.2044426573762635E-5 18-19 0.0018958206853435867 20-21 2.2044426573762635E-4 22-23 0.0 24-25 8.817770629505054E-4 26-27 0.002953953160884193 28-29 0.006172439440653538 30-31 0.017613496832436345 32-33 0.012344878881307076 34-35 0.010404969342815963 36-37 0.004034130062998562 38-39 0.0 40-41 0.003901863503555986 42-43 0.009831814251898136 44-45 0.008222571112013462 46-47 0.004276618755309951 48-49 0.010184525077078337 50-51 0.003042130867179244 52-53 0.0024469313496876524 54-55 0.0044529741679000525 56-57 0.008134393405718412 58-59 0.01580585385338781 60-61 0.007759638153964448 62-63 0.022705759370975517 64-65 0.04139943310552623 66-67 0.06194483867227301 68-69 0.0515619137560308 70-71 0.07140189767241718 72-73 0.03405863905646327 74-75 0.027445311084334484 76-77 0.22987928031119675 78-79 0.08385699868659306 80-81 0.06902109960245081 82-83 0.0282609548675637 84-85 0.05195871343435854 86-87 0.070674431595483 88-89 0.2971368257877466 90-91 0.3021849994731382 92-93 0.052752312791013986 94-95 0.009611369986160509 96-97 0.014725676951273439 98-99 0.001080176902114369 100-101 2.645331188851516E-4 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 2268147.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 68.3745986464301 #Duplication Level Percentage of deduplicated Percentage of total 1 82.33527383930998 56.29641303206735 2 10.592840922517777 14.485624932052666 3 3.114250527363002 6.388068896786356 4 1.3357350446757055 3.653213903106909 5 0.733870404274147 2.5089047175369097 6 0.4482629118339391 1.83898780108354 7 0.2937654654753266 1.4060267058640021 8 0.21347393570061635 1.1676955740002775 9 0.15600978094139464 0.9600395541106804 >10 0.741444911648243 8.699654328031102 >50 0.026333274218693813 1.2095264093189224 >100 0.007899083107631119 0.9873838941972922 >500 8.39898933521011E-4 0.3984602518439257 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 4.408885314752527E-5 0.0 3 0.0 0.0 0.0 4.408885314752527E-5 0.0 4 0.0 0.0 0.0 4.408885314752527E-5 0.0 5 0.0 0.0 0.0 8.817770629505054E-5 0.0 6 0.0 0.0 0.0 8.817770629505054E-5 4.408885314752527E-5 7 0.0 0.0 0.0 8.817770629505054E-5 4.408885314752527E-5 8 0.0 0.0 0.0 8.817770629505054E-5 4.408885314752527E-5 9 0.0 0.0 0.0 1.322665594425758E-4 1.322665594425758E-4 10-11 0.0 0.0 0.0 1.7635541259010108E-4 1.7635541259010108E-4 12-13 0.0 2.2044426573762635E-5 0.0 1.983998391638637E-4 2.2044426573762635E-4 14-15 0.0 6.61332797212879E-5 0.0 2.2044426573762635E-4 2.645331188851516E-4 16-17 0.0 8.817770629505054E-5 0.0 2.2044426573762635E-4 3.967996783277274E-4 18-19 0.0 8.817770629505054E-5 0.0 2.2044426573762635E-4 3.967996783277274E-4 20-21 0.0 8.817770629505054E-5 0.0 2.42488692311389E-4 4.408885314752527E-4 22-23 0.0 8.817770629505054E-5 0.0 2.645331188851516E-4 4.6293295804901533E-4 24-25 0.0 8.817770629505054E-5 0.0 3.0862197203267687E-4 4.8497738462277795E-4 26-27 0.0 8.817770629505054E-5 0.0 4.84977384622778E-4 4.8497738462277795E-4 28-29 0.0 1.1022213286881318E-4 0.0 0.0013447100209995207 5.070218111965406E-4 30-31 0.0 1.322665594425758E-4 0.0 0.005489062216866896 5.290662377703032E-4 32-33 0.0 1.322665594425758E-4 0.0 0.01615856467856801 5.731550909178285E-4 34-35 0.0 1.322665594425758E-4 0.0 0.029495442755694407 6.613327972128791E-4 36-37 0.0 1.322665594425758E-4 0.0 0.05277435721758775 6.613327972128791E-4 38-39 0.0 1.322665594425758E-4 0.0 0.09571690018327736 6.613327972128791E-4 40-41 0.0 1.322665594425758E-4 0.0 0.14646317015607896 6.613327972128791E-4 42-43 0.0 1.322665594425758E-4 0.0 0.19778259521979835 7.054216503604043E-4 44-45 0.0 1.322665594425758E-4 0.0 0.26179960999000507 7.054216503604043E-4 46-47 0.0 1.322665594425758E-4 0.0 0.3390212362778956 7.054216503604043E-4 48-49 0.0 1.322665594425758E-4 0.0 0.42484018892955355 7.495105035079296E-4 50-51 0.0 1.322665594425758E-4 0.0 0.5199398451687656 7.935993566554548E-4 52-53 0.0 1.322665594425758E-4 0.0 0.6123280369394046 8.156437832292175E-4 54-55 0.0 1.322665594425758E-4 0.0 0.7181633289200391 8.376882098029802E-4 56-57 0.0 1.322665594425758E-4 0.0 0.8432434052995683 8.597326363767427E-4 58-59 0.0 1.322665594425758E-4 0.0 0.9812415156513224 9.038214895242681E-4 60-61 0.0 1.322665594425758E-4 0.0 1.1352659241222018 9.258659160980307E-4 62-63 0.0 1.322665594425758E-4 0.0 1.2940298843064406 9.699547692455559E-4 64-65 0.0 1.322665594425758E-4 0.0 1.457621573910333 0.0010140436223930811 66-67 0.0 2.2044426573762635E-4 0.0 1.6441835560040863 0.0010140436223930811 68-69 0.0 2.2044426573762635E-4 0.0 1.855677784552765 0.0010140436223930811 70-71 0.0 2.2044426573762635E-4 0.0 2.0850941319059126 0.0010581324755406065 72-73 0.0 2.2044426573762635E-4 0.0 2.320771096406009 0.0011242657552618944 74-75 0.0 2.2044426573762635E-4 0.0 2.567360052060118 0.001146310181835657 76-77 0.0 2.2044426573762635E-4 0.0 2.8351337016516127 0.001146310181835657 78-79 0.0 2.2044426573762635E-4 0.0 3.142146430544405 0.001146310181835657 80-81 0.0 2.2044426573762635E-4 0.0 3.469836831563386 0.001146310181835657 82-83 0.0 2.2044426573762635E-4 0.0 3.8190425929183602 0.0011903990349831823 84-85 0.0 2.2044426573762635E-4 0.0 4.180196433476313 0.0011903990349831823 86-87 0.0 2.2044426573762635E-4 0.0 4.558236304789769 0.001212443461556945 88-89 0.0 2.2044426573762635E-4 0.0 4.980916139915093 0.0012344878881307075 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 1775 0.0 45.256252 1 GTATCAA 3065 0.0 40.011005 1 TCAACGC 3655 0.0 32.981865 4 CAACGCA 3680 0.0 32.649 5 ATCAACG 3775 0.0 31.933437 3 TATCAAC 4020 0.0 30.223368 2 AACGCAG 4005 0.0 29.994946 6 ACGCAGA 4965 0.0 24.385511 7 CGCAGAG 5005 0.0 23.526564 8 GTACATG 5580 0.0 23.510677 1 TACATGG 5920 0.0 21.565498 2 ACATGGG 6110 0.0 19.341364 3 GTATATA 1020 0.0 19.106184 1 GCAGAGT 6195 0.0 18.240911 9 CATGGGG 5280 0.0 17.977322 4 AGAGTAC 5045 0.0 17.740305 10-11 TCTATAC 700 0.0 17.628048 3 GTATAGG 660 0.0 16.56434 1 GTATAGA 785 0.0 16.348742 1 GTATAGT 640 0.0 16.339281 1 >>END_MODULE