##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921695_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3758903 Sequences flagged as poor quality 0 Sequence length 101 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.305094598078217 33.0 31.0 34.0 28.0 34.0 2 31.439531161086094 34.0 31.0 34.0 28.0 34.0 3 31.512930501265927 34.0 31.0 34.0 28.0 34.0 4 34.984856486054575 37.0 35.0 37.0 32.0 37.0 5 34.71651755844724 37.0 35.0 37.0 32.0 37.0 6 34.68713079321281 37.0 35.0 37.0 32.0 37.0 7 34.57101234056851 37.0 35.0 37.0 32.0 37.0 8 34.51731289687444 37.0 35.0 37.0 32.0 37.0 9 36.1022529711461 39.0 37.0 39.0 32.0 39.0 10-11 35.98752308851811 39.0 37.0 39.0 31.0 39.0 12-13 35.909636401897046 39.0 37.0 39.0 31.0 39.0 14-15 37.14834660537929 40.0 38.0 41.0 31.0 41.0 16-17 37.115705566225046 40.0 38.0 41.0 31.0 41.0 18-19 37.07683026138211 40.0 38.0 41.0 31.0 41.0 20-21 37.01650109087678 40.0 38.0 41.0 31.0 41.0 22-23 36.9254239867323 40.0 37.5 41.0 30.0 41.0 24-25 36.842677504580465 40.0 37.0 41.0 30.0 41.0 26-27 36.71639132480939 40.0 37.0 41.0 30.0 41.0 28-29 36.5956284320186 40.0 37.0 41.0 30.0 41.0 30-31 36.44698094098199 40.0 37.0 41.0 30.0 41.0 32-33 36.40034220090276 40.0 37.0 41.0 29.5 41.0 34-35 36.52917832676182 40.0 37.0 41.0 30.0 41.0 36-37 36.530156005621855 40.0 37.0 41.0 30.0 41.0 38-39 36.42683344050113 40.0 37.0 41.0 30.0 41.0 40-41 36.34498110219923 40.0 37.0 41.0 29.0 41.0 42-43 36.22396161858925 40.0 36.5 41.0 29.0 41.0 44-45 36.0983809638078 40.0 36.0 41.0 28.0 41.0 46-47 35.948161471578274 40.0 36.0 41.0 28.0 41.0 48-49 35.809203908693576 40.0 36.0 41.0 27.5 41.0 50-51 35.65512198638805 40.0 35.0 41.0 27.0 41.0 52-53 35.48425404965225 39.0 35.0 41.0 26.5 41.0 54-55 35.27012841246502 39.0 35.0 41.0 26.0 41.0 56-57 35.043789903596874 39.0 35.0 41.0 26.0 41.0 58-59 34.80265412541904 38.5 35.0 40.5 26.0 41.0 60-61 34.529222887635036 38.0 34.5 40.0 25.5 41.0 62-63 34.226471925452714 37.5 34.0 40.0 24.5 41.0 64-65 33.889039169140574 37.0 34.0 40.0 23.5 41.0 66-67 33.53654204431452 36.5 34.0 39.0 23.0 41.0 68-69 33.1785091288602 36.0 34.0 39.0 22.0 41.0 70-71 32.78185350885617 35.0 33.0 39.0 22.0 40.0 72-73 32.42302235519246 35.0 33.0 37.5 20.5 40.0 74-75 32.02264530369632 35.0 33.0 37.0 20.0 39.0 76-77 29.338639890414836 33.0 29.0 34.5 13.0 36.5 78-79 30.89962989201903 34.5 31.5 36.0 15.0 37.0 80-81 31.081194566606268 35.0 32.0 35.5 18.0 37.0 82-83 30.91026996440185 35.0 32.0 35.0 16.5 37.0 84-85 30.71396601614886 35.0 32.0 35.0 13.5 36.0 86-87 30.504541085524153 35.0 32.0 35.0 8.5 36.0 88-89 30.240817334206284 35.0 32.0 35.0 2.0 36.0 90-91 30.05021252211084 34.5 31.5 35.0 2.0 35.0 92-93 29.897915562066913 34.0 31.0 35.0 2.0 35.0 94-95 29.797288198179096 34.0 31.0 35.0 2.0 35.0 96-97 29.600300140759153 34.0 31.0 35.0 2.0 35.0 98-99 29.40635964801433 34.0 31.0 35.0 2.0 35.0 100-101 28.30923596591878 33.0 29.0 34.5 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 78618.0 3 26617.0 4 14046.0 5 9770.0 6 8581.0 7 8710.0 8 8515.0 9 9384.0 10 10024.0 11 11026.0 12 11467.0 13 12255.0 14 13148.0 15 14186.0 16 15249.0 17 15899.0 18 14988.0 19 13653.0 20 12972.0 21 12939.0 22 13807.0 23 15631.0 24 18726.0 25 22510.0 26 27029.0 27 32753.0 28 39407.0 29 47346.0 30 58032.0 31 72139.0 32 91839.0 33 121420.0 34 171926.0 35 260227.0 36 464689.0 37 906474.0 38 955253.0 39 117644.0 40 4.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.79590019392703 19.38710744964372 13.49991126999023 26.317081086439014 2 14.818891068605748 20.72203076539986 38.01340180020846 26.445676365785932 3 17.554517975240856 24.80482401236015 29.090248291154175 28.55040972124482 4 12.8842451634462 17.002938274942082 35.52452624174309 34.588290319868634 5 14.135295449713317 37.28319154184572 34.46330119109107 14.118211817349893 6 33.64931809916435 35.81022929735335 16.86263628239737 13.677816321084931 7 28.89162077340118 31.642210506629194 21.182642914701443 18.283525805268187 8 26.452983756165033 35.43501920640144 19.640677080520565 18.47131995691296 9 26.571323221515218 15.473907007950727 19.143569052877677 38.81120071765638 10-11 25.538526358038467 25.369609529714417 27.907567242351934 21.184296869895185 12-13 26.127695257209265 22.640380037268937 27.728817608475044 23.50310709704675 14-15 23.28134367778891 24.17358689248239 24.736583129108684 27.80848630062001 16-17 23.66830162949137 27.31940675244879 25.50930417730918 23.502987440750665 18-19 23.703472446877342 26.753010496833074 26.608152284955388 22.935364771334196 20-21 24.241393153363873 25.940761345681988 26.429774479055958 23.38807102189818 22-23 24.08028352952976 25.71065281546238 26.21607953171444 23.992984123293418 24-25 23.917205213036635 25.918663624629012 26.1966716716983 23.96745949063605 26-27 23.780001386078638 26.127475869661254 26.157950976713213 23.9345717675469 28-29 23.865580335360097 26.26265528615433 26.025219849597175 23.8465445288884 30-31 24.09820369127932 25.999852858633467 25.933107086852385 23.96883636323483 32-33 23.883360123901333 26.063805940415453 25.84607132494846 24.206762610734756 34-35 24.15959665162314 26.04777789233179 25.961693876940167 23.830931579104906 36-37 24.21214792947895 25.868530187050848 25.99041865889957 23.92890322457063 38-39 24.080895410176854 26.019572731725187 25.93789996709146 23.961631891006498 40-41 24.201081311748958 25.880142110393617 25.987544323033507 23.931232254823918 42-43 24.096215809650023 25.866449527433495 25.85056583332258 24.186768829593902 44-45 24.022674104445507 25.847797972090504 25.997931703652032 24.13159621981196 46-47 24.222334227111062 25.90873942754328 25.710522699679643 24.158403645666017 48-49 24.001956590509337 25.987640541811146 25.811257392754015 24.199145474925494 50-51 24.032860456791635 26.00030834280111 25.81216336528366 24.154667835123597 52-53 24.23023474493156 25.906836033446094 25.798052023977174 24.064877197645167 54-55 23.88159230214015 25.772043379211063 26.02978802312146 24.316576295527327 56-57 23.926252563446294 25.933416378173646 25.891166739211176 24.249164319168884 58-59 23.981787762295813 25.758444126574627 25.947968684146666 24.31179942698289 60-61 23.93119301447602 25.81238376748975 26.026504338016775 24.229918880017454 62-63 23.938559222250046 25.859425037445554 25.986762540768353 24.215253199536043 64-65 23.76977463361678 25.730321244604436 25.97432166990186 24.525582451876918 66-67 23.781584723803864 25.85428688706563 25.838075600496403 24.526052788634104 68-69 23.88473295954368 25.76518858721618 25.906976682286338 24.443101770953803 70-71 23.763022271868486 25.6017206050656 25.92795458786754 24.70730253519837 72-73 23.738044293994605 25.739098152554014 25.8138129986534 24.709044554797984 74-75 23.680452125217908 25.804073395305938 25.81989341378968 24.695581065686472 76-77 23.698194261288467 25.507692373322865 26.016317931167244 24.77779543422142 78-79 23.61539858362085 25.583861009741266 25.993709951663757 24.80703045497413 80-81 23.669839290577404 25.704110337351622 25.808904626149403 24.817145745921568 82-83 23.61279664533857 25.655027687851817 25.89264865214401 24.8395270146656 84-85 23.500495214611185 25.611285942319807 25.98359523412166 24.90462360894735 86-87 23.48796871894879 25.717286691457275 25.830773144095183 24.96397144549875 88-89 23.359425255554182 25.558219769260184 25.907643239877153 25.174711735308485 90-91 23.208690428369962 25.578061383014216 25.966399525493454 25.24684866312236 92-93 23.281317415985292 25.475440319127728 26.03300087756399 25.210241387322995 94-95 23.128609266061027 25.353267412609366 26.136972852598937 25.381150468730667 96-97 23.07443324363998 25.255743128454135 26.174641020380957 25.49518260752493 98-99 22.9379430190153 25.255076794396608 26.11907361471592 25.687906571872173 100-101 22.858374981177995 25.178203824631577 26.16786888071983 25.795552313470598 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 31.0 1 27.5 2 36.0 3 65.0 4 74.0 5 79.0 6 118.5 7 264.5 8 412.5 9 434.5 10 372.5 11 319.5 12 336.5 13 350.0 14 402.0 15 460.5 16 519.5 17 587.0 18 614.0 19 677.0 20 840.0 21 1021.0 22 1212.5 23 1523.5 24 1934.0 25 2541.5 26 3454.5 27 4792.5 28 6874.5 29 10202.0 30 14808.5 31 21214.5 32 29802.0 33 36807.0 34 43163.5 35 51198.5 36 61201.5 37 72223.5 38 82631.5 39 92718.0 40 102196.5 41 111142.5 42 120162.5 43 130200.0 44 138722.0 45 148272.5 46 156342.5 47 161428.5 48 167030.5 49 169407.0 50 168064.0 51 166584.5 52 165025.5 53 162731.0 54 159593.0 55 151538.0 56 139098.0 57 124909.0 58 112423.0 59 98917.0 60 81845.0 61 66968.0 62 54827.5 63 41967.0 64 29940.5 65 21675.0 66 16215.0 67 12513.0 68 9406.5 69 6880.5 70 5039.5 71 3621.0 72 2509.0 73 1774.0 74 1270.0 75 869.5 76 575.5 77 333.5 78 215.5 79 121.0 80 65.0 81 47.0 82 28.0 83 18.5 84 9.5 85 8.0 86 10.5 87 11.5 88 8.5 89 4.0 90 2.5 91 2.0 92 1.0 93 0.5 94 1.0 95 0.5 96 0.0 97 0.5 98 0.5 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.15815784552035528 2 1.330175319767496E-4 3 0.009896504379070171 4 0.006251824002907231 5 0.02447522588372193 6 0.0019154524604651942 7 0.0 8 0.0 9 2.660350639534992E-5 10-11 0.04598416080436234 12-13 2.261298043604743E-4 14-15 0.004642311865988561 16-17 0.0 18-19 0.0014631928517442455 20-21 1.5962103837209953E-4 22-23 0.0 24-25 5.054666215116484E-4 26-27 0.0025938418735466174 28-29 0.005240890759883934 30-31 0.016294647667151826 32-33 0.01139960249040744 34-35 0.009723581587500396 36-37 0.003697887388953639 38-39 0.0 40-41 0.003591473363372239 42-43 0.008819062370058499 44-45 0.0067572906244188794 46-47 0.0036845856357559637 48-49 0.008619536072093373 50-51 0.002647048886337317 52-53 0.002088375252034969 54-55 0.0038309049209303884 56-57 0.007741620361046826 58-59 0.014658532023837807 60-61 0.0072627572459305284 62-63 0.02075073498837294 64-65 0.040769873550873754 66-67 0.060150527959886166 68-69 0.050227420074420645 70-71 0.0678389413081423 72-73 0.034132298705233946 74-75 0.02676312743372202 76-77 0.2209421206133811 78-79 0.0832423715110499 80-81 0.0664023519627934 82-83 0.027335102821222045 84-85 0.05177042344535095 86-87 0.06670829228633993 88-89 0.28923332153024434 90-91 0.292891303659605 92-93 0.05086590422790904 94-95 0.009258020225581772 96-97 0.014419100466279658 98-99 9.311227238372471E-4 100-101 1.330175319767496E-4 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 3758903.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 57.646870825928545 #Duplication Level Percentage of deduplicated Percentage of total 1 76.3760687228524 44.02841367858513 2 12.8291972663339 14.791261552254115 3 4.419715295037564 7.643482701012331 4 2.0544011302774 4.7371918632697145 5 1.1280091179327076 3.25130979559682 6 0.7188914281289686 2.4865104777130767 7 0.46592541793872555 1.880139966770134 8 0.34411311965996694 1.5869635646836324 9 0.25580690082025787 1.3271820631169866 >10 1.3260404641094952 13.314983198492806 >50 0.06174597860276263 2.3749570953819776 >100 0.01851284719954517 1.7226134403944038 >500 8.78644459872585E-4 0.35026570737041335 >1k 6.93666646444176E-4 0.5047248953585641 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 2.660350639534992E-5 5.320701279069984E-5 0.0 0.0 0.0 6 2.660350639534992E-5 5.320701279069984E-5 0.0 0.0 0.0 7 2.660350639534992E-5 5.320701279069984E-5 0.0 0.0 0.0 8 2.660350639534992E-5 5.320701279069984E-5 0.0 0.0 2.660350639534992E-5 9 2.660350639534992E-5 5.320701279069984E-5 0.0 0.0 5.320701279069984E-5 10-11 2.660350639534992E-5 5.320701279069984E-5 0.0 0.0 5.320701279069984E-5 12-13 2.660350639534992E-5 5.320701279069984E-5 0.0 0.0 7.981051918604975E-5 14-15 2.660350639534992E-5 5.320701279069984E-5 0.0 0.0 9.311227238372472E-5 16-17 2.660350639534992E-5 5.320701279069984E-5 0.0 2.660350639534992E-5 1.596210383720995E-4 18-19 2.660350639534992E-5 5.320701279069984E-5 0.0 5.320701279069984E-5 1.8622454476744944E-4 20-21 2.660350639534992E-5 5.320701279069984E-5 0.0 6.65087659883748E-5 2.1282805116279937E-4 22-23 2.660350639534992E-5 6.65087659883748E-5 0.0 9.311227238372472E-5 2.926385703488491E-4 24-25 2.660350639534992E-5 7.981051918604975E-5 0.0 1.9952629796512442E-4 3.19242076744199E-4 26-27 2.660350639534992E-5 7.981051918604975E-5 0.0 4.1235434912792376E-4 3.591473363372239E-4 28-29 2.660350639534992E-5 7.981051918604975E-5 0.0 0.0015297016177326203 3.724490895348989E-4 30-31 2.660350639534992E-5 7.981051918604975E-5 0.0 0.007648508088663102 3.724490895348989E-4 32-33 2.660350639534992E-5 7.981051918604975E-5 0.0 0.02378353471744283 3.990525959302488E-4 34-35 2.660350639534992E-5 7.981051918604975E-5 0.0 0.04565161697442047 3.990525959302488E-4 36-37 2.660350639534992E-5 7.981051918604975E-5 0.0 0.08051551210552654 3.990525959302488E-4 38-39 2.660350639534992E-5 7.981051918604975E-5 0.0 0.14166367155523832 3.990525959302488E-4 40-41 2.660350639534992E-5 7.981051918604975E-5 0.0 0.21155108285582255 4.1235434912792376E-4 42-43 2.660350639534992E-5 7.981051918604975E-5 0.0 0.28779673218489543 4.2565610232559874E-4 44-45 2.660350639534992E-5 7.981051918604975E-5 0.0 0.3761469769238525 4.5225960872094864E-4 46-47 2.660350639534992E-5 7.981051918604975E-5 0.0 0.4828669428287987 4.7886311511629855E-4 48-49 2.660350639534992E-5 7.981051918604975E-5 0.0 0.5983926693506058 4.921648683139735E-4 50-51 2.660350639534992E-5 7.981051918604975E-5 0.0 0.7241740475878202 5.054666215116484E-4 52-53 2.660350639534992E-5 7.981051918604975E-5 0.0 0.8487848715436392 5.586736343023483E-4 54-55 2.660350639534992E-5 1.1971577877907465E-4 0.0 0.989317894077075 5.852771406976982E-4 56-57 2.660350639534992E-5 1.330175319767496E-4 0.0 1.15485821262214 6.118806470930482E-4 58-59 2.660350639534992E-5 1.330175319767496E-4 0.0 1.3339663194288334 6.38484153488398E-4 60-61 2.660350639534992E-5 1.330175319767496E-4 0.0 1.5287305897491903 6.38484153488398E-4 62-63 2.660350639534992E-5 1.330175319767496E-4 0.0 1.7285894315442563 6.916911662790979E-4 64-65 2.660350639534992E-5 1.330175319767496E-4 0.0 1.9405794722556022 7.049929194767729E-4 66-67 2.660350639534992E-5 1.330175319767496E-4 0.0 2.188005383485554 7.315964258721228E-4 68-69 2.660350639534992E-5 1.330175319767496E-4 0.0 2.4610371696210303 7.448981790697977E-4 70-71 2.660350639534992E-5 1.4631928517442455E-4 0.0 2.7541413013317984 7.848034386628226E-4 72-73 2.660350639534992E-5 1.596210383720995E-4 0.0 3.0561842111914035 7.981051918604976E-4 74-75 2.660350639534992E-5 1.596210383720995E-4 0.0 3.3701055866565324 8.114069450581725E-4 76-77 2.660350639534992E-5 1.596210383720995E-4 0.0 3.7202077308193378 8.247086982558475E-4 78-79 2.660350639534992E-5 1.596210383720995E-4 0.0 4.117664116365865 8.247086982558475E-4 80-81 2.660350639534992E-5 1.8622454476744944E-4 0.0 4.535192847487684 8.380104514535225E-4 82-83 2.660350639534992E-5 1.8622454476744944E-4 0.0 4.97522814501997 9.178209706395723E-4 84-85 2.660350639534992E-5 1.8622454476744944E-4 0.0 5.438514907141791 9.311227238372472E-4 86-87 2.660350639534992E-5 1.8622454476744944E-4 0.0 5.9203842184807645 9.710279834302721E-4 88-89 2.660350639534992E-5 1.8622454476744944E-4 0.0 6.442916989345029 0.0010242349962209718 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 2725 0.0 44.310318 1 GTATCAA 4825 0.0 40.887295 1 TCAACGC 5835 0.0 32.86213 4 CAACGCA 6120 0.0 31.587984 5 ATCAACG 6155 0.0 31.307428 3 TATCAAC 6575 0.0 29.957237 2 AACGCAG 6600 0.0 29.215208 6 GTACATG 9390 0.0 25.009153 1 ACGCAGA 7820 0.0 23.806768 7 TACATGG 9715 0.0 23.694544 2 CGCAGAG 8120 0.0 22.81023 8 ACATGGG 10300 0.0 21.473269 3 CATGGGG 8895 0.0 18.942513 4 GCAGAGT 9615 0.0 18.127739 9 AGAGTAC 7945 0.0 17.962942 10-11 CGTATAC 345 1.0968506E-9 17.88437 3 GGACCGT 565 0.0 16.811575 6 GAGTACA 7620 0.0 16.157806 1 TAAGGTG 1845 0.0 15.96152 5 GTATATA 1390 0.0 15.731882 1 >>END_MODULE