##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921694_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3148527 Sequences flagged as poor quality 0 Sequence length 101 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.26429565317369 31.0 31.0 34.0 26.0 34.0 2 30.32351953786644 31.0 31.0 34.0 26.0 34.0 3 30.384622714050092 33.0 31.0 34.0 26.0 34.0 4 33.82676756464213 37.0 35.0 37.0 29.0 37.0 5 33.81925770368176 37.0 35.0 37.0 29.0 37.0 6 33.862592888674605 37.0 35.0 37.0 30.0 37.0 7 33.77251076455752 37.0 35.0 37.0 29.0 37.0 8 33.74312083078849 37.0 35.0 37.0 29.0 37.0 9 35.29086998459915 39.0 37.0 39.0 29.0 39.0 10-11 35.18642638287682 39.0 35.0 39.0 28.0 39.0 12-13 35.07813637932912 39.0 35.0 39.0 27.5 39.0 14-15 36.21854362373262 40.0 37.0 41.0 27.0 41.0 16-17 36.15521353318552 40.0 36.0 41.0 27.0 41.0 18-19 36.12104549206661 40.0 36.5 41.0 27.0 41.0 20-21 36.04441013210304 40.0 36.0 41.0 27.0 41.0 22-23 35.945502928829896 40.0 36.0 41.0 27.0 41.0 24-25 35.841448397933384 40.0 36.0 41.0 27.0 41.0 26-27 35.6948363472824 40.0 36.0 41.0 26.5 41.0 28-29 35.56307965597881 40.0 36.0 41.0 25.5 41.0 30-31 35.424634916581624 40.0 36.0 41.0 25.0 41.0 32-33 35.25427652359342 39.5 35.0 41.0 25.0 41.0 34-35 35.087717843931465 39.0 35.0 41.0 24.0 41.0 36-37 35.05788262257239 39.0 35.0 41.0 24.0 41.0 38-39 35.242047471722486 39.5 35.0 41.0 24.5 41.0 40-41 35.30558114953437 40.0 35.0 41.0 24.0 41.0 42-43 35.15143192356299 40.0 35.0 41.0 24.0 41.0 44-45 35.034071805641176 40.0 35.0 41.0 23.0 41.0 46-47 34.88126209494154 40.0 35.0 41.0 22.5 41.0 48-49 34.72218421503135 39.0 35.0 41.0 21.0 41.0 50-51 33.041370456724685 37.0 32.5 39.5 17.0 40.0 52-53 33.159146165810235 37.5 33.0 39.5 16.5 40.0 54-55 34.07224044767601 39.0 34.0 40.5 18.0 41.0 56-57 34.09640238117697 39.0 34.0 41.0 18.0 41.0 58-59 33.91046813319372 38.0 34.0 41.0 16.0 41.0 60-61 33.65821334865478 38.0 34.0 40.0 13.5 41.0 62-63 33.36997554729561 37.0 34.0 40.0 12.5 41.0 64-65 33.08387985874029 37.0 33.0 40.0 9.0 41.0 66-67 32.742684436245895 36.0 33.0 39.5 7.5 41.0 68-69 32.38929759852782 36.0 33.0 39.0 4.5 41.0 70-71 31.986183697964158 35.0 32.0 39.0 2.0 40.5 72-73 31.633634712359143 35.0 32.0 37.5 2.0 40.0 74-75 31.247598003764935 35.0 32.0 37.0 2.0 39.0 76-77 30.88002802580381 35.0 32.0 36.5 2.0 39.0 78-79 30.546353739383527 35.0 31.0 36.0 2.0 38.5 80-81 30.247992791549827 35.0 31.0 36.0 2.0 37.0 82-83 29.94746924514225 35.0 31.0 35.0 2.0 37.0 84-85 29.698965738581883 35.0 31.0 35.0 2.0 36.5 86-87 29.481307608287942 35.0 31.0 35.0 2.0 36.0 88-89 29.27852913441746 35.0 31.0 35.0 2.0 36.0 90-91 29.072207575161336 34.5 30.0 35.0 2.0 35.5 92-93 28.898947666639035 34.0 30.0 35.0 2.0 35.0 94-95 28.689127010821252 34.0 30.0 35.0 2.0 35.0 96-97 28.47955170783036 34.0 30.0 35.0 2.0 35.0 98-99 28.234612566447737 34.0 30.0 35.0 2.0 35.0 100-101 27.193617682173283 33.0 27.5 35.0 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 117812.0 3 19838.0 4 13102.0 5 9911.0 6 8869.0 7 9082.0 8 9538.0 9 10144.0 10 11346.0 11 12048.0 12 12035.0 13 11885.0 14 12779.0 15 13285.0 16 13128.0 17 13765.0 18 13270.0 19 12584.0 20 12779.0 21 13136.0 22 14364.0 23 16683.0 24 19740.0 25 23246.0 26 27488.0 27 32766.0 28 38658.0 29 45813.0 30 54979.0 31 67466.0 32 83745.0 33 108544.0 34 150244.0 35 218508.0 36 368022.0 37 673486.0 38 726299.0 39 128124.0 40 16.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.40700243295394 17.563760172264324 12.857920065895682 25.17131732888605 2 15.771023433040193 19.13671795041314 39.80072825378017 25.2915303627665 3 19.573894354634167 23.19218806316829 28.74452286554648 28.489394716651063 4 13.425610001452517 15.41260218869179 36.295662505009915 34.86612530484578 5 14.648813487138495 36.690349780145915 34.16031947571911 14.500517256996476 6 34.02352776749852 34.70690347961292 17.085504551020506 14.184064201868054 7 29.513785320963947 31.13733861271658 20.66491004877553 18.683966017543945 8 26.62815933559765 34.94621299045862 19.631591386454517 18.794036287489217 9 26.6407014793296 15.962999925674598 19.145588215675797 38.250710379320005 10-11 25.85009660504538 25.019221743719083 27.62253117130739 21.508150479928148 12-13 26.42137153297043 22.284690627319566 27.452198168665333 23.841739671044678 14-15 23.45680679467313 23.88309430751355 24.6153753277821 28.04472357003122 16-17 23.900090574328928 27.074052059112535 25.330599477521776 23.695257889036757 18-19 23.869777822035598 26.46429195931224 26.518989543137 23.14694067551516 20-21 24.37699230390345 25.65854732425118 26.497727290415863 23.46673308142951 22-23 24.136455256696372 25.511235391005076 26.230818942509572 24.12149040978898 24-25 24.044718133548194 25.69877246581993 26.208280486286036 24.048228914345845 26-27 23.892639473652025 25.835804705993354 26.20705462200824 24.06450119834638 28-29 24.000042564390156 26.043832110162995 26.024281078715056 23.931844246731792 30-31 24.250101130035834 25.78360888190918 25.93266351658715 24.03362647146783 32-33 23.949597715570775 25.807316399165252 25.94092946284785 24.30215642241612 34-35 24.284678376838333 25.844912326172174 25.954556224895768 23.91585307209372 36-37 24.376332177337158 25.724159769491038 25.913614403761017 23.985893649410787 38-39 24.180990056870066 25.79603005331271 25.963305229155715 24.05967466066151 40-41 24.404529840325527 25.662097135476756 25.970243920953457 23.96312910324426 42-43 24.213625055509663 25.639861269615405 25.877323248481144 24.269190426393788 44-45 24.125529570416457 25.75267221729393 25.99125636976247 24.13054184252714 46-47 24.345792555846742 25.728815107459063 25.76574896402999 24.159643372664206 48-49 24.169122363987896 25.77060251409722 25.793980508577206 24.26629461333768 50-51 24.165208792880506 25.848635306016643 25.935646263223106 24.050509637879745 52-53 24.38107278171596 25.71344045363807 25.87488796545262 24.03059879919335 54-55 23.953421758260994 25.582832727301664 26.116198948130588 24.34754656630676 56-57 23.970532864875565 25.759506623453465 26.071558950343114 24.198401561327852 58-59 24.163658821467923 25.626443212641277 26.028159447015902 24.1817385188749 60-61 24.08556446261827 25.65851598011087 26.138189080457845 24.117730476813016 62-63 24.115297562090333 25.651083419041115 26.16335683182661 24.070262187041937 64-65 23.920687200635143 25.54034267414543 26.111243459307065 24.42772666591236 66-67 23.87340214276655 25.733010466542726 26.01239728273764 24.38119010795308 68-69 24.01514097920534 25.516015684547234 26.139814098461557 24.32902923778587 70-71 23.954448548967157 25.36809835961761 26.120039071195144 24.557414020220094 72-73 23.968657729388074 25.54242289946238 26.00440949593144 24.48450987521811 74-75 23.921651249049013 25.65576127407821 26.067488285416534 24.35509919145624 76-77 23.967666067271345 25.358606907891858 26.170599015031343 24.50312800980545 78-79 23.89708006254451 25.410848210200488 26.17954094238505 24.512530784869956 80-81 24.022131364629544 25.559953065870765 26.03453083697075 24.383384732528942 82-83 23.982678622133317 25.595619328230786 26.10408106356456 24.31762098607134 84-85 23.952301754665182 25.579723869016828 26.138527036167584 24.329447340150402 86-87 23.881069339341142 25.615201541790437 26.11906596687354 24.384663151994886 88-89 23.89336906437764 25.446462964059485 26.138147091950138 24.52202087961274 90-91 23.794661362242785 25.466280763037304 26.19656761835146 24.54249025636846 92-93 23.91526779696845 25.37440702770658 26.34530414969978 24.36502102562519 94-95 23.848267169639044 25.251471596933584 26.3899087585228 24.510352474904572 96-97 23.84009559191194 25.1443597381156 26.37418547167862 24.641359198293838 98-99 23.74704440170604 25.124248942956758 26.400835001287774 24.727871654049427 100-101 23.872202145490743 24.992450331779462 26.503959974102685 24.631387548627107 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 49.0 1 37.5 2 49.0 3 76.5 4 70.5 5 74.5 6 119.0 7 249.0 8 415.0 9 456.5 10 407.0 11 403.5 12 456.0 13 537.5 14 629.0 15 724.0 16 790.5 17 848.5 18 997.5 19 1151.0 20 1231.0 21 1320.5 22 1450.0 23 1603.5 24 1887.0 25 2289.5 26 2842.5 27 3682.0 28 5024.0 29 7217.0 30 10517.5 31 15306.0 32 22276.0 33 29047.5 34 35022.5 35 41880.0 36 50837.5 37 60374.0 38 69067.5 39 77578.5 40 85325.5 41 92348.0 42 99919.0 43 108308.5 44 115828.0 45 124274.0 46 130396.5 47 133973.0 48 138160.5 49 140046.0 50 138913.0 51 137803.0 52 137292.5 53 136187.0 54 133913.5 55 127763.0 56 118314.0 57 106665.0 58 96471.5 59 85198.5 60 70599.5 61 58235.5 62 47361.0 63 36128.5 64 26124.5 65 18849.0 66 13950.5 67 10781.5 68 8148.5 69 6024.0 70 4534.5 71 3173.5 72 2160.5 73 1618.5 74 1221.0 75 896.5 76 665.0 77 474.5 78 317.5 79 217.0 80 164.0 81 132.5 82 102.0 83 82.0 84 66.0 85 51.0 86 50.0 87 53.5 88 50.5 89 36.5 90 32.0 91 30.0 92 25.0 93 21.5 94 15.5 95 16.0 96 16.0 97 10.5 98 9.5 99 7.5 100 3.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.05510513328931274 2 0.07530505534810406 3 0.07193840167163884 4 0.0719066407878986 5 0.06739659529678482 6 0.010544613401758982 7 0.013720701775782771 8 0.01762729047583203 9 0.006638024701709721 10-11 0.01268847305422504 12-13 0.022661390548659736 14-15 0.039319974070414515 16-17 0.026552098806838884 18-19 0.009766471750123153 20-21 0.02008875896570047 22-23 0.036556777185013815 24-25 0.034269993555716693 26-27 0.020565172221804037 28-29 0.011290994169654572 30-31 0.011195711518433859 32-33 0.00816254712124114 34-35 0.004859415212256398 36-37 5.081741398438063E-4 38-39 0.0038748278163090234 40-41 8.734243028565422E-4 42-43 0.22810666702238855 44-45 0.19817203409721434 46-47 0.20401603670541812 48-49 0.21227386647787996 50-51 0.2030790906350811 52-53 0.21086050715143936 54-55 0.2065092660790268 56-57 0.20917718031320678 58-59 0.2185625214584471 60-61 0.22272319722841824 62-63 0.2081131907079088 64-65 0.20843079954531119 66-67 0.20541351558998858 68-69 0.20091935054074492 70-71 0.19242331414023128 72-73 0.20468301526396313 74-75 0.2031584928444317 76-77 0.1967110334451634 78-79 0.21484649806083922 80-81 0.22559755720690977 82-83 0.22521642660202693 84-85 0.21921361957512195 86-87 0.23831779114487506 88-89 0.23125099451267211 90-91 0.23823838893552446 92-93 0.2337601043281509 94-95 0.23714263844648625 96-97 0.243780663148196 98-99 0.23674562739973326 100-101 0.2433042498920924 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 3148527.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 61.34738252592298 #Duplication Level Percentage of deduplicated Percentage of total 1 79.10390753697777 48.52817674966217 2 11.800581034402864 14.478695174913286 3 3.8153829509362462 7.021912721219121 4 1.7186303030311705 4.217338824827846 5 0.930474479589576 2.8541086914995413 6 0.5799656786189009 2.134762580288413 7 0.38869261884893 1.6691692341469666 8 0.27553881290284615 1.3522867964711702 9 0.20432009679941426 1.128105282247855 >10 1.1125736896996028 12.006142090548872 >50 0.05249806017746724 2.198015899325553 >100 0.01593054403632453 1.6226241493207685 >500 0.0010373751584822012 0.4339628691353161 >1k 4.6681882037226304E-4 0.35469893639307926 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 3.17608837402379E-5 8 0.0 0.0 0.0 0.0 3.17608837402379E-5 9 0.0 0.0 0.0 0.0 6.35217674804758E-5 10-11 0.0 0.0 0.0 0.0 6.35217674804758E-5 12-13 0.0 0.0 0.0 0.0 1.4292397683107055E-4 14-15 0.0 0.0 0.0 0.0 1.588044187011895E-4 16-17 0.0 0.0 0.0 1.588044187011895E-5 1.588044187011895E-4 18-19 0.0 0.0 0.0 3.17608837402379E-5 1.9056530244142736E-4 20-21 0.0 0.0 0.0 4.764132561035685E-5 2.540870699219032E-4 22-23 0.0 0.0 0.0 1.1116309309083263E-4 2.6996751179202215E-4 24-25 0.0 0.0 0.0 2.3820662805178422E-4 3.0172839553226E-4 26-27 0.0 0.0 0.0 3.652501630127358E-4 3.17608837402379E-4 28-29 0.0 0.0 0.0 0.0012545549077393968 3.17608837402379E-4 30-31 0.0 0.0 0.0 0.0059869265850348435 3.17608837402379E-4 32-33 0.0 0.0 0.0 0.01996171543073952 3.4936972114261685E-4 34-35 0.0 0.0 0.0 0.03801777783706476 3.4936972114261685E-4 36-37 0.0 0.0 0.0 0.06782536722727803 3.4936972114261685E-4 38-39 0.0 0.0 0.0 0.11778523735067223 3.4936972114261685E-4 40-41 0.0 0.0 0.0 0.1779244707128127 3.4936972114261685E-4 42-43 0.0 0.0 0.0 0.24176384703069087 3.4936972114261685E-4 44-45 0.0 0.0 0.0 0.31832345728653433 3.652501630127358E-4 46-47 0.0 0.0 0.0 0.41246271669259943 3.970110467529737E-4 48-49 3.17608837402379E-5 0.0 0.0 0.5153679800109703 4.1289148862309264E-4 50-51 3.17608837402379E-5 0.0 0.0 0.6268010406135949 4.1289148862309264E-4 52-53 3.17608837402379E-5 0.0 0.0 0.7396633409845302 4.446523723633305E-4 54-55 3.17608837402379E-5 0.0 0.0 0.8673262131784165 4.922936979736874E-4 56-57 3.17608837402379E-5 0.0 0.0 1.0171899431067288 5.240545817139252E-4 58-59 3.17608837402379E-5 0.0 0.0 1.1805202877409022 5.399350235840442E-4 60-61 3.17608837402379E-5 0.0 0.0 1.3593181827565717 5.875763491944011E-4 62-63 3.17608837402379E-5 0.0 0.0 1.5443412109853274 6.0345679106452E-4 64-65 3.17608837402379E-5 0.0 0.0 1.743339028059788 6.19337232934639E-4 66-67 3.17608837402379E-5 0.0 0.0 1.9770991323879388 6.35217674804758E-4 68-69 3.17608837402379E-5 0.0 0.0 2.2345846168700474 6.35217674804758E-4 70-71 3.17608837402379E-5 0.0 0.0 2.5077440974779632 6.35217674804758E-4 72-73 4.764132561035685E-5 0.0 0.0 2.7950689322340256 6.987394422852337E-4 74-75 6.35217674804758E-5 0.0 0.0 3.0933353914385995 7.305003260254716E-4 76-77 6.35217674804758E-5 0.0 0.0 3.4236327018952037 7.305003260254716E-4 78-79 6.35217674804758E-5 0.0 0.0 3.798029999425128 7.305003260254716E-4 80-81 6.35217674804758E-5 0.0 0.0 4.191960240455298 7.622612097657095E-4 82-83 6.35217674804758E-5 0.0 0.0 4.604200630961717 8.575438609864232E-4 84-85 6.35217674804758E-5 0.0 0.0 5.040404608250144 8.575438609864232E-4 86-87 6.35217674804758E-5 0.0 0.0 5.502985999484839 9.051851865967801E-4 88-89 6.35217674804758E-5 0.0 0.0 6.0065548111863105 9.687069540772558E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 2155 0.0 42.06308 1 GTATCAA 3975 0.0 41.548668 1 TCAACGC 4500 0.0 35.75499 4 CAACGCA 4700 0.0 34.22969 5 ATCAACG 4760 0.0 34.00087 3 TATCAAC 5095 0.0 32.325233 2 AACGCAG 5040 0.0 32.001484 6 ACGCAGA 6115 0.0 26.069136 7 GTACATG 7905 0.0 25.455341 1 CGCAGAG 6365 0.0 24.674475 8 TACATGG 8255 0.0 23.515953 2 ACATGGG 8385 0.0 21.735554 3 GCAGAGT 7485 0.0 20.222322 9 GAGTACA 6060 0.0 19.735262 1 CATGGGG 7410 0.0 19.6639 4 GTATTAC 725 0.0 18.328842 1 AGAGTAC 6125 0.0 17.973442 10-11 AGTACAT 6285 0.0 17.671236 2 TAAGGTA 930 0.0 17.351837 4 GTATATA 1165 0.0 17.10954 1 >>END_MODULE