##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921694_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3148527 Sequences flagged as poor quality 0 Sequence length 101 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.33336795269661 33.0 31.0 34.0 28.0 34.0 2 31.47116635810968 34.0 31.0 34.0 28.0 34.0 3 31.548356739516606 34.0 31.0 34.0 28.0 34.0 4 35.01800206890397 37.0 35.0 37.0 32.0 37.0 5 34.758393051734984 37.0 35.0 37.0 32.0 37.0 6 34.73150492277818 37.0 35.0 37.0 32.0 37.0 7 34.61675475547772 37.0 35.0 37.0 32.0 37.0 8 34.563884000359536 37.0 35.0 37.0 32.0 37.0 9 36.15013719113732 39.0 37.0 39.0 32.0 39.0 10-11 36.03971666750833 39.0 37.0 39.0 31.0 39.0 12-13 35.96069971767751 39.0 37.0 39.0 31.0 39.0 14-15 37.20992594314738 40.0 38.0 41.0 31.0 41.0 16-17 37.17693432516221 40.0 38.0 41.0 31.0 41.0 18-19 37.134399673244026 40.0 38.0 41.0 31.0 41.0 20-21 37.079305815068444 40.0 38.0 41.0 31.0 41.0 22-23 36.98547288938605 40.0 38.0 41.0 31.0 41.0 24-25 36.90821628653653 40.0 37.0 41.0 30.0 41.0 26-27 36.78186037470856 40.0 37.0 41.0 30.0 41.0 28-29 36.66540750643078 40.0 37.0 41.0 30.0 41.0 30-31 36.51227685200095 40.0 37.0 41.0 30.0 41.0 32-33 36.46465807661805 40.0 37.0 41.0 30.0 41.0 34-35 36.59865136935463 40.0 37.0 41.0 30.0 41.0 36-37 36.60279711750923 40.0 37.0 41.0 30.0 41.0 38-39 36.498378606885055 40.0 37.0 41.0 30.0 41.0 40-41 36.42165971579726 40.0 37.0 41.0 30.0 41.0 42-43 36.30268868585215 40.0 37.0 41.0 29.0 41.0 44-45 36.17709567045161 40.0 36.0 41.0 28.5 41.0 46-47 36.02764260875006 40.0 36.0 41.0 28.0 41.0 48-49 35.88965300281687 40.0 36.0 41.0 28.0 41.0 50-51 35.73542342180963 40.0 35.0 41.0 27.5 41.0 52-53 35.56382127261415 39.0 35.0 41.0 27.0 41.0 54-55 35.34824316259635 39.0 35.0 41.0 26.5 41.0 56-57 35.12469815250115 39.0 35.0 41.0 26.0 41.0 58-59 34.88370768298954 38.5 35.0 40.5 26.0 41.0 60-61 34.6111815144034 38.0 34.5 40.0 26.0 41.0 62-63 34.305747735369586 37.5 34.0 40.0 25.5 41.0 64-65 33.967277237895686 37.0 34.0 40.0 24.5 41.0 66-67 33.615480985235315 36.5 34.0 39.0 23.5 41.0 68-69 33.25732334517062 36.0 34.0 39.0 23.0 41.0 70-71 32.86012205072404 35.5 33.0 39.0 22.0 40.0 72-73 32.49779261858005 35.0 33.0 37.5 22.0 40.0 74-75 32.09635807474416 35.0 33.0 37.0 20.5 39.0 76-77 29.408833400507604 33.0 29.0 34.5 14.0 36.5 78-79 30.97010157448229 34.5 31.5 36.0 17.5 37.5 80-81 31.153035371778614 35.0 32.0 36.0 18.0 37.0 82-83 30.977273499639672 35.0 32.0 35.0 18.0 37.0 84-85 30.777779259952354 35.0 32.0 35.0 16.5 36.5 86-87 30.568520295363513 35.0 32.0 35.0 12.0 36.0 88-89 30.3054183750052 35.0 32.0 35.0 7.0 36.0 90-91 30.11588196639254 34.5 31.5 35.0 3.5 35.0 92-93 29.962538990454902 34.0 31.0 35.0 2.0 35.0 94-95 29.856507344545562 34.0 31.0 35.0 2.0 35.0 96-97 29.660797890569143 34.0 31.0 35.0 2.0 35.0 98-99 29.464483550561894 34.0 31.0 35.0 2.0 35.0 100-101 28.363892067624004 33.0 29.0 34.5 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 62991.0 3 21131.0 4 11130.0 5 7866.0 6 6909.0 7 6718.0 8 7141.0 9 7589.0 10 8442.0 11 9094.0 12 9595.0 13 10010.0 14 11038.0 15 11905.0 16 12490.0 17 13312.0 18 12715.0 19 11524.0 20 10914.0 21 10850.0 22 11562.0 23 13142.0 24 15630.0 25 19029.0 26 22562.0 27 27335.0 28 33252.0 29 40021.0 30 48512.0 31 60376.0 32 77390.0 33 102301.0 34 144803.0 35 217481.0 36 386293.0 37 761236.0 38 805400.0 39 98837.0 40 1.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.9553259685206 19.21074021935371 13.560799471896798 26.2731343402289 2 14.883310253706503 20.577922325410032 38.12003735088232 26.418730070001146 3 18.113887673884584 24.423682959159656 28.636142582104906 28.82628678485085 4 13.065869632885901 16.671356969069414 35.290152905975845 34.972620492068835 5 14.308283995847138 37.071450083679935 34.28450161196655 14.335764308506379 6 33.95081197122774 35.41067363644766 16.776482642723447 13.862031749601153 7 29.27181504239919 31.388582661034825 20.69618586723252 18.643416429333463 8 26.523005837332825 35.56612346027206 19.348158678645603 18.56271202374952 9 26.37704119324408 16.06142048691991 19.022171009545417 38.539367310290594 10-11 25.756573365643288 25.422209215199914 27.521704674075586 21.299512745081216 12-13 26.327576131007586 22.501318079605657 27.51378425418927 23.65732153519749 14-15 23.291768823059886 24.167113724959574 24.599323012401065 27.941794439579475 16-17 23.80208646806689 27.342345697265053 25.29624572002173 23.559322114646328 18-19 23.785755655007726 26.709651559384152 26.5350112062349 22.969581579373223 20-21 24.265301283762504 25.8401054337143 26.494397285580508 23.40019599694269 22-23 24.014308913342653 25.676133633283122 26.295073855171005 24.014483598203224 24-25 23.927500286643614 25.93913500009052 26.22177672034604 23.911587992919824 26-27 23.75810521735402 26.073033110100734 26.223536455413566 23.945325217131685 28-29 23.90870375299441 26.251474574430038 26.04902034896832 23.79080132360723 30-31 24.145666084711348 26.022980246555917 25.887164200345108 23.944189468387627 32-33 23.8852642808577 26.00317042688316 25.897743647750676 24.21382164450846 34-35 24.14287474930103 26.062083769826422 26.02690491512923 23.768136565743323 36-37 24.238858211882565 25.947268370074276 25.99572162959222 23.81815178845094 38-39 24.081300265584595 25.98347607737716 25.968866066216385 23.966357590821865 40-41 24.288584429635975 25.844378940761942 25.96915567426047 23.89788095534162 42-43 24.112060445402726 25.87195437943771 25.836426473991175 24.17955870116839 44-45 24.01857507452423 25.953759245054087 25.916231114837984 24.111434565583703 46-47 24.195383917111624 25.899298284508422 25.785400137910138 24.119917660469817 48-49 24.011384676077345 25.992903397329385 25.83664282603731 24.159069100555957 50-51 24.08052404182247 26.024400570312196 25.824905644077038 24.070169743788295 52-53 24.29437613051481 25.88463230378074 25.744611245833276 24.076380319871173 54-55 23.846419550356412 25.77987268065427 26.0261419951356 24.347565773853717 56-57 23.936725904472645 25.879458915703253 25.94543163533254 24.238383544491562 58-59 24.02821456026328 25.795611209585704 25.94873920750186 24.227435022649157 60-61 23.989163577537706 25.850311829840596 26.0025382181937 24.157986374428 62-63 24.026427645623667 25.845150960658735 26.008755209921723 24.119666183795875 64-65 23.790232318798378 25.72413844599598 25.94746355139504 24.538165683810607 66-67 23.783408428390622 25.94292034097473 25.833610752033763 24.440060478600888 68-69 23.9153210827548 25.765126240149428 25.91063456437591 24.408918112719853 70-71 23.820437559494202 25.62969696295508 25.919766456950434 24.63009902060029 72-73 23.82140574105399 25.748466370722074 25.825227264351046 24.60490062387289 74-75 23.753817922808544 25.876303431063263 25.80525051355708 24.564628132571116 76-77 23.790821709779383 25.610098306194594 25.973173708126595 24.625906275899425 78-79 23.70123832366166 25.639721087105443 25.98311709160035 24.675923497632546 80-81 23.853085044660276 25.73403367600925 25.78030930618496 24.632571973145513 82-83 23.773586104521083 25.81719493239782 25.825200924183733 24.584018038897366 84-85 23.73864477213436 25.759209188509057 25.845327230286475 24.656818809070106 86-87 23.64997214242104 25.817460234219787 25.810245550335768 24.722322073023406 88-89 23.573203047630454 25.677853777063262 25.84409801115324 24.90484516415304 90-91 23.44590506143527 25.705908689749947 25.89082850288059 24.957357745934196 92-93 23.570844650930738 25.637128763605944 25.99202531434387 24.800001271119452 94-95 23.437739719478774 25.48609353057975 26.051112838370745 25.025053911570733 96-97 23.389927636144222 25.36461068988909 26.068046261661387 25.177415412305304 98-99 23.24371476884807 25.394935099088705 26.02071086729774 25.34063926476548 100-101 23.167736109915666 25.39471682436495 26.094394101615265 25.34315296410412 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 35.0 1 28.5 2 34.5 3 52.0 4 54.5 5 57.5 6 107.0 7 268.5 8 398.5 9 399.0 10 328.5 11 253.5 12 255.5 13 284.5 14 322.5 15 370.5 16 402.5 17 446.5 18 526.0 19 612.5 20 695.5 21 817.5 22 1002.5 23 1237.5 24 1578.0 25 2057.0 26 2740.5 27 3765.5 28 5364.5 29 7820.0 30 11438.0 31 16496.0 32 23837.0 33 30541.5 34 36070.0 35 43059.5 36 52098.5 37 61040.5 38 69434.0 39 78058.5 40 85994.5 41 93586.5 42 100752.0 43 108356.0 44 116102.0 45 124411.0 46 130754.5 47 134802.0 48 139103.0 49 140696.5 50 139430.0 51 138646.5 52 138231.0 53 137189.5 54 134615.5 55 128034.5 56 118380.5 57 106542.0 58 95695.0 59 84048.0 60 69263.0 61 56924.5 62 46320.5 63 34949.5 64 24803.0 65 17680.5 66 13028.5 67 9983.0 68 7468.0 69 5471.0 70 4033.0 71 2815.0 72 1892.5 73 1371.5 74 996.5 75 657.0 76 428.0 77 270.0 78 167.0 79 92.5 80 51.0 81 36.0 82 25.0 83 15.5 84 11.5 85 10.0 86 5.0 87 4.0 88 4.0 89 2.0 90 1.5 91 0.5 92 1.0 93 1.0 94 1.0 95 1.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.16522011721671753 2 2.2232618618166528E-4 3 0.012386744658692779 4 0.005939285259424486 5 0.026012163783254837 6 0.002477348931738556 7 0.0 8 0.0 9 3.176088374023789E-5 10-11 0.04792717356401899 12-13 2.2232618618166528E-4 14-15 0.005335828468359966 16-17 1.5880441870118946E-5 18-19 0.0017944899313234414 20-21 2.6996751179202215E-4 22-23 0.0 24-25 5.716959073242821E-4 26-27 0.0029220013041018865 28-29 0.005113502282178301 30-31 0.01648389866118347 32-33 0.011767407425758141 34-35 0.010449330750538268 36-37 0.004192436653711403 38-39 3.176088374023789E-5 40-41 0.0032872514671146223 42-43 0.009448862912720773 44-45 0.007050916190332813 46-47 0.00317608837402379 48-49 0.008257829772461853 50-51 0.00241382716425808 52-53 0.0022867836292971284 54-55 0.004589447700464376 56-57 0.0081307862375009 58-59 0.016102768056300613 60-61 0.008114905795630782 62-63 0.021819727129543432 64-65 0.04197200786272438 66-67 0.062235451688996156 68-69 0.051706718729107294 70-71 0.07025507483340623 72-73 0.034651124160599546 74-75 0.027727251505227684 76-77 0.22767789509189534 78-79 0.0870883432157323 80-81 0.06868291108826445 82-83 0.028092501668240417 84-85 0.0534694477766905 86-87 0.06879407418135527 88-89 0.29124730389798154 90-91 0.2962814039708092 92-93 0.05381881749783312 94-95 0.010036439261915175 96-97 0.015165821985963593 98-99 0.0011116309309083263 100-101 1.2704353496095156E-4 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 3148527.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 60.50457529446869 #Duplication Level Percentage of deduplicated Percentage of total 1 78.49505935044893 47.493102287130256 2 12.115011350590446 14.660272329102849 3 3.864166598458526 7.0139927672041456 4 1.8063357265748572 4.37166303902549 5 0.9597140108736009 2.9033544316029163 6 0.600641052015774 2.180491905398237 7 0.4122838240349495 1.7461540371809854 8 0.3072129689451156 1.4870232168781614 9 0.21835332332061 1.1890237582484382 >10 1.1485357090395645 12.265102076165139 >50 0.0544721149459827 2.245358964864237 >100 0.016582998591713076 1.6328235936968982 >500 0.0013153001293647543 0.5680540009465932 >1k 3.156720304468596E-4 0.24358359255570375 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 3.17608837402379E-5 2 0.0 0.0 0.0 3.17608837402379E-5 3.17608837402379E-5 3 0.0 0.0 0.0 3.17608837402379E-5 3.17608837402379E-5 4 0.0 0.0 0.0 3.17608837402379E-5 3.17608837402379E-5 5 0.0 0.0 0.0 3.17608837402379E-5 3.17608837402379E-5 6 0.0 0.0 0.0 3.17608837402379E-5 6.35217674804758E-5 7 0.0 0.0 0.0 3.17608837402379E-5 6.35217674804758E-5 8 0.0 0.0 0.0 3.17608837402379E-5 6.35217674804758E-5 9 0.0 0.0 0.0 3.17608837402379E-5 6.35217674804758E-5 10-11 0.0 0.0 0.0 3.17608837402379E-5 6.35217674804758E-5 12-13 0.0 0.0 0.0 3.17608837402379E-5 2.064457443115463E-4 14-15 0.0 0.0 0.0 3.17608837402379E-5 2.6996751179202215E-4 16-17 0.0 0.0 0.0 4.764132561035685E-5 2.8584795366214105E-4 18-19 0.0 0.0 0.0 6.35217674804758E-5 3.4936972114261685E-4 20-21 0.0 0.0 0.0 7.940220935059473E-5 3.4936972114261685E-4 22-23 0.0 0.0 0.0 1.1116309309083263E-4 3.652501630127358E-4 24-25 0.0 0.0 0.0 2.6996751179202215E-4 4.1289148862309264E-4 26-27 0.0 0.0 0.0 3.811306048828548E-4 4.2877193049321155E-4 28-29 0.0 0.0 0.0 0.0013021962333497538 4.446523723633305E-4 30-31 0.0 0.0 0.0 0.006177491887476271 4.605328142334495E-4 32-33 0.0 1.588044187011895E-5 0.0 0.020628693989284512 4.7641325610356844E-4 34-35 0.0 3.17608837402379E-5 0.0 0.0392246914191938 4.7641325610356844E-4 36-37 0.0 3.17608837402379E-5 0.0 0.06909580257688755 4.7641325610356844E-4 38-39 0.0 3.17608837402379E-5 0.0 0.11918271623524271 4.7641325610356844E-4 40-41 0.0 3.17608837402379E-5 0.0 0.1795125148998246 4.7641325610356844E-4 42-43 0.0 3.17608837402379E-5 0.0 0.24403475021811788 4.7641325610356844E-4 44-45 0.0 3.17608837402379E-5 0.0 0.32118193682315577 5.081741398438064E-4 46-47 3.17608837402379E-5 3.17608837402379E-5 0.0 0.41530531578735075 5.716959073242821E-4 48-49 3.17608837402379E-5 3.17608837402379E-5 0.0 0.5178612093845789 6.0345679106452E-4 50-51 3.17608837402379E-5 3.17608837402379E-5 0.0 0.6292625091034634 6.0345679106452E-4 52-53 3.17608837402379E-5 3.17608837402379E-5 0.0 0.7423947769861907 6.0345679106452E-4 54-55 3.17608837402379E-5 3.17608837402379E-5 0.0 0.8704546602268299 6.0345679106452E-4 56-57 3.17608837402379E-5 3.17608837402379E-5 0.0 1.0195084876197664 6.19337232934639E-4 58-59 3.17608837402379E-5 3.17608837402379E-5 0.0 1.1822988972303556 6.35217674804758E-4 60-61 3.17608837402379E-5 3.17608837402379E-5 0.0 1.3610332704785444 6.35217674804758E-4 62-63 3.17608837402379E-5 3.17608837402379E-5 0.0 1.546167461800391 6.35217674804758E-4 64-65 3.17608837402379E-5 3.17608837402379E-5 0.0 1.744545941641917 6.35217674804758E-4 66-67 3.17608837402379E-5 3.17608837402379E-5 0.0 1.9788618614355222 6.35217674804758E-4 68-69 3.17608837402379E-5 3.17608837402379E-5 0.0 2.2355374433822544 6.35217674804758E-4 70-71 3.17608837402379E-5 3.17608837402379E-5 0.0 2.5085540000133397 6.35217674804758E-4 72-73 3.17608837402379E-5 3.17608837402379E-5 0.0 2.7958788347694017 6.510981166748769E-4 74-75 3.17608837402379E-5 3.17608837402379E-5 0.0 3.096177990533351 6.669785585449958E-4 76-77 3.17608837402379E-5 3.17608837402379E-5 0.0 3.428984410805434 6.669785585449958E-4 78-79 3.17608837402379E-5 3.17608837402379E-5 0.0 3.805112676499201 6.828590004151147E-4 80-81 3.17608837402379E-5 3.17608837402379E-5 0.0 4.2022031254615255 7.305003260254716E-4 82-83 3.17608837402379E-5 3.17608837402379E-5 0.0 4.617444919481396 7.781416516358284E-4 84-85 3.17608837402379E-5 3.17608837402379E-5 0.0 5.057412561493041 7.940220935059474E-4 86-87 3.17608837402379E-5 3.17608837402379E-5 0.0 5.523884660985916 8.416634191163043E-4 88-89 3.17608837402379E-5 3.17608837402379E-5 0.0 6.0323764096671235 8.89304744726661E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 2245 0.0 44.041477 1 GTATCAA 4140 0.0 41.56455 1 TCAACGC 4880 0.0 34.23481 4 ATCAACG 5045 0.0 33.02054 3 CAACGCA 5080 0.0 33.008728 5 TATCAAC 5530 0.0 30.639471 2 AACGCAG 5550 0.0 30.378298 6 GTACATG 8250 0.0 25.524937 1 ACGCAGA 6660 0.0 24.45952 7 TACATGG 8640 0.0 23.620708 2 CGCAGAG 6970 0.0 23.030956 8 ACATGGG 8785 0.0 22.420462 3 GTATATA 905 0.0 20.48476 1 TATACCG 280 1.5770638E-9 20.358278 5 CATGGGG 7465 0.0 19.963879 4 TATACTG 1355 0.0 19.632092 5 GCAGAGT 8130 0.0 18.57653 9 AGAGTAC 6870 0.0 17.766605 10-11 CTATACT 1230 0.0 17.749977 4 CCTATAC 855 0.0 17.208134 3 >>END_MODULE