##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921693_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3618057 Sequences flagged as poor quality 0 Sequence length 101 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.481568974728702 31.0 31.0 34.0 26.0 34.0 2 30.54898361192209 33.0 31.0 34.0 26.0 34.0 3 30.610938136132184 33.0 31.0 34.0 26.0 34.0 4 34.06656694463354 37.0 35.0 37.0 30.0 37.0 5 34.068091243449174 37.0 35.0 37.0 30.0 37.0 6 34.1126803696017 37.0 35.0 37.0 30.0 37.0 7 34.03046303582282 37.0 35.0 37.0 30.0 37.0 8 34.00232113534972 37.0 35.0 37.0 30.0 37.0 9 35.57308301113001 39.0 37.0 39.0 30.0 39.0 10-11 35.4750801327895 39.0 37.0 39.0 30.0 39.0 12-13 35.37268166311365 39.0 35.0 39.0 30.0 39.0 14-15 36.52346715377895 40.0 37.0 41.0 29.0 41.0 16-17 36.469296227229144 40.0 37.0 41.0 29.0 41.0 18-19 36.4403222503128 40.0 37.0 41.0 29.0 41.0 20-21 36.37052304593322 40.0 37.0 41.0 28.0 41.0 22-23 36.27385942233636 40.0 37.0 41.0 28.0 41.0 24-25 36.173226817598504 40.0 36.0 41.0 27.0 41.0 26-27 36.03154110065154 40.0 36.0 41.0 27.0 41.0 28-29 35.89869742240103 40.0 36.0 41.0 27.0 41.0 30-31 35.7548454875089 40.0 36.0 41.0 27.0 41.0 32-33 35.582844742357565 40.0 36.0 41.0 26.0 41.0 34-35 35.41578877834152 39.0 35.0 41.0 25.0 41.0 36-37 35.385096337619885 39.0 35.0 41.0 25.0 41.0 38-39 35.562240865746446 40.0 35.5 41.0 25.5 41.0 40-41 35.62882080077787 40.0 36.0 41.0 26.0 41.0 42-43 35.47390242884509 40.0 35.0 41.0 25.0 41.0 44-45 35.36094152192738 40.0 35.0 41.0 24.5 41.0 46-47 35.21390085894169 40.0 35.0 41.0 24.0 41.0 48-49 35.06152045144673 40.0 35.0 41.0 23.0 41.0 50-51 33.37703897423396 38.0 32.5 39.5 19.5 40.0 52-53 33.49914843795993 37.5 33.5 39.5 21.0 40.0 54-55 34.42331892504734 39.0 34.5 40.5 22.0 41.0 56-57 34.460335616603054 39.0 34.5 41.0 22.0 41.0 58-59 34.288184929093156 39.0 34.0 41.0 21.0 41.0 60-61 34.04869478286274 38.0 34.0 41.0 20.0 41.0 62-63 33.770085158967916 38.0 34.0 40.0 18.5 41.0 64-65 33.496734573280634 37.0 34.0 40.0 18.0 41.0 66-67 33.166944301872526 37.0 33.5 40.0 16.0 41.0 68-69 32.81825797658799 36.0 33.0 39.0 13.0 41.0 70-71 32.41792818631658 35.5 33.0 39.0 9.5 41.0 72-73 32.05877602259998 35.0 33.0 38.5 7.5 40.0 74-75 31.658562731322363 35.0 32.0 37.0 4.5 39.5 76-77 31.277972127028402 35.0 32.0 37.0 2.0 39.0 78-79 30.928442946034295 35.0 32.0 36.0 2.0 39.0 80-81 30.603536511447995 35.0 32.0 36.0 2.0 37.5 82-83 30.289084997831708 35.0 31.0 35.5 2.0 37.0 84-85 30.022519960299135 35.0 31.0 35.0 2.0 37.0 86-87 29.785593621106578 35.0 31.0 35.0 2.0 36.0 88-89 29.563420504430972 35.0 31.0 35.0 2.0 36.0 90-91 29.34555232269696 35.0 31.0 35.0 2.0 36.0 92-93 29.1639558193804 35.0 31.0 35.0 2.0 35.0 94-95 28.942579815630324 34.0 30.5 35.0 2.0 35.0 96-97 28.71766420484807 34.0 30.0 35.0 2.0 35.0 98-99 28.46722273861357 34.0 30.0 35.0 2.0 35.0 100-101 27.412493639541886 33.5 27.5 35.0 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 115184.0 3 20140.0 4 13887.0 5 10583.0 6 9364.0 7 9853.0 8 10415.0 9 11111.0 10 12509.0 11 13195.0 12 13161.0 13 13555.0 14 14556.0 15 15675.0 16 15267.0 17 15958.0 18 15295.0 19 14280.0 20 14519.0 21 15194.0 22 16436.0 23 19098.0 24 22330.0 25 26152.0 26 31102.0 27 37415.0 28 43740.0 29 52036.0 30 61935.0 31 75740.0 32 94741.0 33 122903.0 34 170052.0 35 246402.0 36 409065.0 37 757748.0 38 885160.0 39 172277.0 40 24.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.604251950082535 18.257092045112326 13.180641509193947 24.95801449561119 2 15.549735931806403 19.776624916951423 39.90746134403436 24.766177807207814 3 18.756394395087113 24.088424440411774 29.72174303154416 27.43343813295695 4 13.098233501325005 16.101035083531627 37.42489538666896 33.37583602847441 5 14.070727291534485 37.23382953031197 34.76034908400574 13.935094094147804 6 32.812973800139375 35.74633654449758 17.680531587689497 13.760158067673553 7 28.415721379612318 31.8532804658121 21.59008358036663 18.14091457420895 8 26.051037623474443 35.04690736483085 20.41488352703798 18.487171484656727 9 26.5888941253215 15.80843686037014 19.72563550098609 37.87703351332227 10-11 25.225581217600237 25.356165048121 28.47147673477951 20.946776999499253 12-13 25.901528491389687 22.915552505978628 27.936300948273136 23.246618054358557 14-15 23.10806345695227 24.417765181626518 25.370614868834895 27.10355649258632 16-17 23.334429056703822 27.386799288821162 26.115875372847754 23.162896281627262 18-19 23.29447757709913 26.899658387595533 27.225155565150366 22.580708470154974 20-21 23.93648195051936 26.130763706088516 27.089162902845022 22.843591440547097 22-23 23.684901028356176 26.03541363044043 26.70359768443597 23.576087656767427 24-25 23.531546396997253 26.10331966710568 26.840762342978586 23.524371592918484 26-27 23.382643152065 26.29907374246278 26.74596802005696 23.572315085415262 28-29 23.499796896770626 26.524784191589024 26.57466507316899 23.40075383847136 30-31 23.849866769902313 26.209792726613827 26.472977281846166 23.46736322163769 32-33 23.54002533077335 26.304172722483187 26.38090583774263 23.774896109000828 34-35 23.91437413683327 26.32591323782832 26.38878197318826 23.37093065215015 36-37 23.93510389220208 26.139508555625174 26.429942933016843 23.4954446191559 38-39 23.69536228162637 26.272181138809263 26.462014469401606 23.57044211016276 40-41 23.983493722736277 26.089937375924798 26.456381153490828 23.470187747848094 42-43 23.738293136253162 26.09499178855711 26.323834597703012 23.842880477486712 44-45 23.71407212098915 26.14458897344684 26.444685774846672 23.696653130717337 46-47 23.85002547228976 26.12760405523838 26.179822595437308 23.842547877034544 48-49 23.608163703933897 26.187461189779416 26.321070826956134 23.883304279330556 50-51 23.720965204980534 26.21994154510951 26.386219634135582 23.672873615774375 52-53 23.89756845632026 26.13267593330392 26.298369212540784 23.671386397835033 54-55 23.460872972956132 25.963291127846826 26.616431821187398 23.95940407800964 56-57 23.52090739476716 26.117829984236696 26.468962711327382 23.892299909668765 58-59 23.63399237371009 26.01309124832475 26.506544031485696 23.846372346479473 60-61 23.635210557937608 26.02056065498481 26.630128425840955 23.714100361236632 62-63 23.661253922601926 25.998398347331523 26.603788713126225 23.736559016940323 64-65 23.481970537515377 25.8529501327943 26.54228403426022 24.122795295430098 66-67 23.453629803924176 25.93818562701447 26.47153801458203 24.136646554479324 68-69 23.587728197885944 25.897632700287478 26.534172581927333 23.98046651989924 70-71 23.462490304504332 25.715002133632108 26.527277676503715 24.295229885359852 72-73 23.426236926734322 25.868490784877828 26.483104593879926 24.222167694507927 74-75 23.465474367591575 25.930580122791408 26.468391418171787 24.13555409144523 76-77 23.46310150357721 25.663247998161204 26.598473299354342 24.275177198907244 78-79 23.387522852482885 25.6930944612686 26.65966741215513 24.25971527409338 80-81 23.543750370502924 25.83039747276838 26.503341590123764 24.12251056660493 82-83 23.53753458778726 25.791969954712123 26.587492524273433 24.083002933227185 84-85 23.501611801522664 25.790029266703705 26.58570911788283 24.1226498138908 86-87 23.48737579177914 25.8471536399573 26.513960953463673 24.151509614799892 88-89 23.400211038201014 25.646917410042125 26.632187120907602 24.32068443084925 90-91 23.359531151540875 25.706086771263088 26.690136055316984 24.24424602187906 92-93 23.53408544559306 25.49146390399979 26.8141636681492 24.160286982257947 94-95 23.421141321459686 25.43283997239 26.842567996140254 24.303450710010065 96-97 23.398188538957662 25.30846385161208 26.904218038058108 24.389129571372152 98-99 23.26411783414433 25.20786536153557 26.878711683568135 24.64930512075196 100-101 23.468439944692655 25.148066009186582 26.936550184240065 24.446943861880698 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 56.0 1 45.0 2 56.5 3 84.0 4 85.5 5 93.5 6 154.5 7 328.0 8 501.5 9 600.5 10 588.5 11 549.5 12 614.5 13 713.5 14 809.0 15 929.5 16 1053.0 17 1128.0 18 1262.0 19 1393.0 20 1533.0 21 1682.0 22 1835.0 23 2096.0 24 2419.0 25 2907.0 26 3722.0 27 4922.0 28 6825.5 29 9920.0 30 14525.0 31 21219.5 32 30595.5 33 39669.0 34 47655.5 35 57126.5 36 69021.5 37 81022.0 38 92081.5 39 101938.0 40 110237.5 41 118874.5 42 126993.5 43 134674.5 44 141925.0 45 149443.0 46 154716.0 47 158062.5 48 161525.5 49 162282.0 50 159197.5 51 154982.5 52 150670.5 53 146390.5 54 141842.5 55 132786.0 56 120528.5 57 107178.5 58 95869.5 59 83786.5 60 68120.5 61 55843.0 62 46381.0 63 35292.5 64 25022.5 65 18121.0 66 13482.0 67 10351.0 68 7818.0 69 5799.0 70 4397.0 71 3166.5 72 2214.5 73 1627.5 74 1266.5 75 959.0 76 669.5 77 416.5 78 284.0 79 209.5 80 144.5 81 109.0 82 95.0 83 82.5 84 69.0 85 66.0 86 55.0 87 39.5 88 35.0 89 35.5 90 37.5 91 36.5 92 29.5 93 20.5 94 15.5 95 12.5 96 8.0 97 5.5 98 5.5 99 4.5 100 6.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.053288270472245186 2 0.07470860740999935 3 0.07147482751100936 4 0.07186177553311072 5 0.06696964696797203 6 0.010115926863507126 7 0.012741645584909249 8 0.016804599816973586 9 0.006688672953466459 10-11 0.012644908579383907 12-13 0.022042217687559925 14-15 0.03957925483208252 16-17 0.026644135236122593 18-19 0.00996391156911016 20-21 0.019983101427091945 22-23 0.03631783578865673 24-25 0.034092884661573876 26-27 0.020964291054563263 28-29 0.012119764835103481 30-31 0.012257960557282541 32-33 0.008927443652767217 34-35 0.005569287603816081 36-37 7.738960442027308E-4 38-39 0.004049134659846431 40-41 0.001091746205214567 42-43 0.22541104244626328 44-45 0.19500798356687027 46-47 0.20095039962056985 48-49 0.20837150990158532 50-51 0.20006594699862384 52-53 0.20646440893551427 54-55 0.20313389203099894 56-57 0.2060912804856308 58-59 0.2151016415717055 60-61 0.21995231142019045 62-63 0.20484751898601927 64-65 0.20446057096391793 66-67 0.20206978497022018 68-69 0.19702564111068452 70-71 0.1891623045186961 72-73 0.20046671459294313 74-75 0.1994993445376897 76-77 0.19352928933955435 78-79 0.21206133568376617 80-81 0.2238494307856399 82-83 0.22221872126392703 84-85 0.2158893571881261 86-87 0.2361350304873583 88-89 0.2289626725062651 90-91 0.23583099989856438 92-93 0.23096651047786143 94-95 0.23480835155443933 96-97 0.24213272482992942 98-99 0.23518148000432276 100-101 0.24243675541872337 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 3618057.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 63.134826308925405 #Duplication Level Percentage of deduplicated Percentage of total 1 79.97403290491017 50.491466766757895 2 11.569824573187852 14.60917729705904 3 3.5754181110223993 6.772002042635561 4 1.6111550336507172 4.068799728251556 5 0.8535361561000123 2.6943928481881065 6 0.5233934440203057 1.9826612507671366 7 0.36469073475126257 1.6117280336496744 8 0.2670627279229883 1.3488767152804537 9 0.19705859026451839 1.1197133882128862 >10 1.0034221793511349 11.094285056804114 >50 0.04556492949618772 1.9451864614390297 >100 0.013306367278087752 1.3698652779509364 >500 0.0010520558111987229 0.46450671425092616 >1k 4.821922332762398E-4 0.42733841875272577 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 2.763914443581182E-5 2 0.0 0.0 0.0 0.0 2.763914443581182E-5 3 0.0 0.0 0.0 0.0 2.763914443581182E-5 4 0.0 0.0 0.0 0.0 1.1055657774324728E-4 5 0.0 0.0 0.0 0.0 1.1055657774324728E-4 6 0.0 0.0 0.0 0.0 1.1055657774324728E-4 7 0.0 0.0 0.0 0.0 1.1055657774324728E-4 8 0.0 0.0 0.0 0.0 1.1055657774324728E-4 9 0.0 0.0 0.0 1.381957221790591E-4 1.1055657774324728E-4 10-11 0.0 0.0 0.0 2.0729358326858864E-4 1.1055657774324728E-4 12-13 0.0 1.381957221790591E-5 0.0 2.2111315548649455E-4 2.2111315548649455E-4 14-15 0.0 2.763914443581182E-5 0.0 2.2111315548649455E-4 3.0403058879393E-4 16-17 0.0 2.763914443581182E-5 0.0 2.2111315548649455E-4 3.5930887766555365E-4 18-19 0.0 2.763914443581182E-5 0.0 2.625718721402123E-4 3.8694802210136547E-4 20-21 0.0 2.763914443581182E-5 0.0 3.3166973322974183E-4 4.145871665371773E-4 22-23 0.0 2.763914443581182E-5 0.0 3.4548930544764774E-4 4.422263109729891E-4 24-25 0.0 2.763914443581182E-5 0.0 4.698654554088009E-4 4.698654554088009E-4 26-27 0.0 2.763914443581182E-5 0.0 7.877156164206368E-4 4.975045998446127E-4 28-29 0.0 2.763914443581182E-5 0.0 0.002584260004748405 4.975045998446127E-4 30-31 0.0 4.145871665371773E-5 0.0 0.010710168468877079 5.251437442804246E-4 32-33 0.0 5.527828887162364E-5 0.0 0.0318126552456194 5.804220331520482E-4 34-35 0.0 5.527828887162364E-5 0.0 0.060723200325478566 6.0806117758786E-4 36-37 0.0 5.527828887162364E-5 0.0 0.10701876725546336 6.218807498057659E-4 38-39 0.0 8.291743330743546E-5 0.0 0.18581796804196288 6.633394664594837E-4 40-41 0.0 1.1055657774324728E-4 0.0 0.2763361660692466 7.047981831132014E-4 42-43 0.0 1.1055657774324728E-4 0.0 0.3711384314840811 7.186177553311073E-4 44-45 0.0 1.1055657774324728E-4 0.0 0.49005585041916144 7.462568997669191E-4 46-47 0.0 1.1055657774324728E-4 0.0 0.6296611689644469 7.738960442027309E-4 48-49 0.0 1.1055657774324728E-4 0.0 0.7756373103021871 8.015351886385427E-4 50-51 0.0 1.1055657774324728E-4 0.0 0.9302783234205542 8.015351886385427E-4 52-53 0.0 1.1055657774324728E-4 0.0 1.0921055140922324 8.706330497280724E-4 54-55 0.0 1.1055657774324728E-4 0.0 1.2777576472675802 8.844526219459782E-4 56-57 0.0 1.1055657774324728E-4 0.0 1.4898604416680001 8.982721941638841E-4 58-59 0.0 1.1055657774324728E-4 0.0 1.7140277226146519 9.25911338599696E-4 60-61 0.0 1.1055657774324728E-4 0.0 1.9493473983411538 9.397309108176018E-4 62-63 0.0 1.1055657774324728E-4 0.0 2.197947682969063 9.673700552534137E-4 64-65 0.0 1.1055657774324728E-4 0.0 2.471768686894651 9.673700552534137E-4 66-67 0.0 1.1055657774324728E-4 0.0 2.783082190247417 9.811896274713196E-4 68-69 0.0 1.1055657774324728E-4 0.0 3.118994532148056 0.0010088287719071313 70-71 0.0 1.1055657774324728E-4 0.0 3.4763410305586673 0.0010502874885608491 72-73 2.763914443581182E-5 1.1055657774324728E-4 0.0 3.847935507925939 0.001064107060778755 74-75 2.763914443581182E-5 1.1055657774324728E-4 0.0 4.243534582235714 0.001091746205214567 76-77 2.763914443581182E-5 1.1055657774324728E-4 0.0 4.684613868714617 0.0011055657774324728 78-79 2.763914443581182E-5 1.1055657774324728E-4 0.0 5.169957245007472 0.0011055657774324728 80-81 2.763914443581182E-5 1.1055657774324728E-4 0.0 5.677619230432246 0.0011332049218682845 82-83 4.145871665371773E-5 1.1055657774324728E-4 0.0 6.208290803599833 0.001188483210739908 84-85 5.527828887162364E-5 1.1055657774324728E-4 0.0 6.763892885048522 0.001188483210739908 86-87 5.527828887162364E-5 1.1055657774324728E-4 0.0 7.358410881862834 0.0012023027829578142 88-89 5.527828887162364E-5 1.1055657774324728E-4 0.0 7.998160338546352 0.0012437614996115317 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 2570 0.0 48.19955 1 GTATCAA 5040 0.0 42.65828 1 TCAACGC 5770 0.0 36.114235 4 CAACGCA 5975 0.0 34.872753 5 ATCAACG 5995 0.0 34.83607 3 TATCAAC 6320 0.0 33.269962 2 AACGCAG 6390 0.0 32.737022 6 GTACATG 9005 0.0 27.3539 1 ACGCAGA 7375 0.0 27.275412 7 CGCAGAG 7620 0.0 26.090752 8 TACATGG 9310 0.0 25.643894 2 ACATGGG 9675 0.0 23.744339 3 GCAGAGT 9000 0.0 21.194202 9 CATGGGG 8170 0.0 21.147987 4 AGAGTAC 7620 0.0 18.214088 10-11 CAGAGTA 8355 0.0 17.378468 10-11 GTATAGC 1360 0.0 17.09987 1 ATGGGGG 5015 0.0 16.941107 5 GTGTAGC 2440 0.0 16.922522 1 GTATAAT 1180 0.0 16.490639 1 >>END_MODULE