##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921693_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3618057 Sequences flagged as poor quality 0 Sequence length 101 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.408367253473344 33.0 31.0 34.0 29.0 34.0 2 31.55267205574705 34.0 31.0 34.0 29.0 34.0 3 31.626015565813365 34.0 31.0 34.0 28.0 34.0 4 35.10338228502204 37.0 35.0 37.0 32.0 37.0 5 34.84986195629312 37.0 35.0 37.0 32.0 37.0 6 34.82262523780029 37.0 35.0 37.0 32.0 37.0 7 34.71540967983644 37.0 35.0 37.0 32.0 37.0 8 34.65872676964459 37.0 35.0 37.0 32.0 37.0 9 36.24890099851937 39.0 37.0 39.0 32.0 39.0 10-11 36.147606159880844 39.0 37.0 39.0 32.0 39.0 12-13 36.07217492703957 39.0 37.0 39.0 32.0 39.0 14-15 37.320468140772796 40.0 38.0 41.0 32.0 41.0 16-17 37.287514818036314 40.0 38.0 41.0 31.5 41.0 18-19 37.253435338359786 40.0 38.0 41.0 31.0 41.0 20-21 37.19944904129482 40.0 38.0 41.0 31.0 41.0 22-23 37.11105795182331 40.0 38.0 41.0 31.0 41.0 24-25 37.03141326960852 40.0 37.5 41.0 31.0 41.0 26-27 36.906052336931126 40.0 37.0 41.0 30.0 41.0 28-29 36.791872129156616 40.0 37.0 41.0 30.0 41.0 30-31 36.63799602936051 40.0 37.0 41.0 30.0 41.0 32-33 36.583929164189506 40.0 37.0 41.0 30.0 41.0 34-35 36.71191830311131 40.0 37.0 41.0 30.0 41.0 36-37 36.70895759795934 40.0 37.0 41.0 30.0 41.0 38-39 36.606458107210585 40.0 37.0 41.0 30.0 41.0 40-41 36.52721032310989 40.0 37.0 41.0 30.0 41.0 42-43 36.41010036602519 40.0 37.0 41.0 30.0 41.0 44-45 36.28788822287764 40.0 36.5 41.0 29.0 41.0 46-47 36.14111220469992 40.0 36.0 41.0 28.5 41.0 48-49 36.004597909872615 40.0 36.0 41.0 28.0 41.0 50-51 35.85618731269297 40.0 35.5 41.0 28.0 41.0 52-53 35.687639525856 39.5 35.0 41.0 27.5 41.0 54-55 35.48756404335255 39.0 35.0 41.0 27.0 41.0 56-57 35.274156957726206 39.0 35.0 41.0 26.5 41.0 58-59 35.04672977788907 39.0 35.0 41.0 26.0 41.0 60-61 34.78044099360513 38.0 35.0 40.0 26.0 41.0 62-63 34.48944516352285 38.0 34.0 40.0 26.0 41.0 64-65 34.16144936356724 37.0 34.0 40.0 25.5 41.0 66-67 33.818579419837775 37.0 34.0 39.5 24.5 41.0 68-69 33.463847308099346 36.0 34.0 39.0 23.5 41.0 70-71 33.06676691384354 36.0 33.5 39.0 22.5 40.5 72-73 32.699874407727684 35.0 33.0 38.0 22.0 40.0 74-75 32.2880213053581 35.0 33.0 37.0 21.5 39.0 76-77 29.55601321372217 33.0 29.0 34.5 15.5 36.5 78-79 31.125432103474324 34.5 31.5 36.0 18.5 38.0 80-81 31.292895744870798 35.0 32.0 36.0 19.0 37.0 82-83 31.10084722269439 35.0 32.0 35.5 18.0 37.0 84-85 30.89098306079755 35.0 32.0 35.0 18.0 36.5 86-87 30.667726351464335 35.0 32.0 35.0 14.5 36.0 88-89 30.392176242662842 35.0 32.0 35.0 7.0 36.0 90-91 30.189828131508154 34.5 32.0 35.0 4.5 35.5 92-93 30.02504631629629 34.0 31.0 35.0 2.0 35.0 94-95 29.91882963701235 34.0 31.0 35.0 2.0 35.0 96-97 29.7183242276172 34.0 31.0 35.0 2.0 35.0 98-99 29.51971666007473 34.0 31.0 35.0 2.0 35.0 100-101 28.407846808383617 33.0 29.0 34.5 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 65743.0 3 22788.0 4 12410.0 5 8634.0 6 7288.0 7 7307.0 8 7672.0 9 8558.0 10 9356.0 11 10544.0 12 10967.0 13 11861.0 14 12908.0 15 13668.0 16 14709.0 17 15661.0 18 14720.0 19 13751.0 20 13085.0 21 12871.0 22 13518.0 23 15509.0 24 18178.0 25 21663.0 26 26184.0 27 31456.0 28 38016.0 29 45923.0 30 55477.0 31 69213.0 32 87714.0 33 116064.0 34 163875.0 35 245309.0 36 425943.0 37 844613.0 38 973029.0 39 131868.0 40 4.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.41823788719437 19.81635649220801 13.77090988722095 25.99449573337667 2 14.693763384274188 21.118574304625803 38.435738347596995 25.75192396350301 3 17.4769205423137 25.154694631346487 29.480339373138793 27.88804545320102 4 12.766195040350087 17.340200053291525 36.31441557881562 33.579189327542764 5 13.870453707282307 37.58333153635237 34.7431340122051 13.803080744160226 6 32.76453653245947 36.35310564877495 17.37028978537242 13.512068033393145 7 28.251821350520455 32.07202097700506 21.626110368078777 18.050047304395704 8 25.97855699896381 35.54181153033244 20.209714772321167 18.269916698382584 9 26.388176412968733 15.763713994476591 19.627197588981485 38.22091200357319 10-11 25.18813152663651 25.64810614424493 28.39822010783714 20.765542221281414 12-13 25.794414712271085 23.07404753014131 27.981150572920537 23.15038718466706 14-15 22.983214170314987 24.628490275916263 25.296742035997394 27.091553517771356 16-17 23.28412736449426 27.603420841628534 26.0546475635956 23.05780423028161 18-19 23.253197516254474 27.109219214409276 27.1809991339146 22.456584135421647 20-21 23.82689241070571 26.273707345986463 27.091993326240193 22.80740691706763 22-23 23.585338760555736 26.134607608448402 26.72256130845921 23.557492322536653 24-25 23.43452359235784 26.316349533282697 26.783564342643356 23.465562531716103 26-27 23.278712675549865 26.520766505152704 26.73833425443417 23.46218656486326 28-29 23.437235038352107 26.682248628574058 26.54534443511265 23.33517189796118 30-31 23.763592975433646 26.385400202767283 26.421862376717286 23.429144445081786 32-33 23.519884078818993 26.42112012268804 26.312209055070717 23.74678674342225 34-35 23.80972322712569 26.48870718852081 26.390163302284407 23.31140628206909 36-37 23.83374190176281 26.307983295360287 26.427306099061976 23.43096870381493 38-39 23.64177789349366 26.449182530844595 26.388680443674602 23.520359131987142 40-41 23.897029913144955 26.245337623822717 26.403245838878064 23.454386624154264 42-43 23.737919588958512 26.208842710235707 26.241556531057952 23.81168116974783 44-45 23.647055929354025 26.274568012617568 26.358665757830558 23.719710300197853 46-47 23.75547344580674 26.25131221734465 26.17132154866799 23.82189278818062 48-49 23.505121184127674 26.35560593722341 26.316009152731084 23.82326372591783 50-51 23.677249627828324 26.349063586767546 26.282769211548846 23.690917573855277 52-53 23.831580995620065 26.189114274235887 26.21790108365823 23.761403646485817 54-55 23.431519773969136 26.111034179097175 26.49105990110873 23.966386145824956 56-57 23.490627904485823 26.226720060257826 26.341845672251342 23.940806363005013 58-59 23.542386135989133 26.15022256843672 26.416439463403158 23.890951832170988 60-61 23.553792793868553 26.182055543024944 26.487102134773323 23.777049528333176 62-63 23.555404308208796 26.169710396654764 26.444429823458037 23.8304554716784 64-65 23.36131672541778 26.007632990467194 26.391453019339068 24.23959726477596 66-67 23.34455304639961 26.192526625731443 26.287038258474865 24.175882069394078 68-69 23.4317465619708 26.083616586603604 26.333332042885633 24.15130480853996 70-71 23.349001158838284 25.892927767590695 26.262400814229096 24.495670259341924 72-73 23.311528770397107 26.058436449852756 26.192141980011357 24.43789279973878 74-75 23.293653777676532 26.154971988950397 26.142323888681236 24.409050344691835 76-77 23.254452760921605 25.79541115315902 26.358425007177903 24.59171107874147 78-79 23.194839668396387 25.85470032273511 26.391029253073068 24.559430755795443 80-81 23.330221022040256 25.940220391465335 26.186186094827406 24.543372491667007 82-83 23.259645199959305 25.9558114486157 26.275484250523068 24.50905910090193 84-85 23.172363903440466 25.93418441614753 26.226848984142713 24.66660269626929 86-87 23.083281095356053 25.965254796179238 26.19221169442021 24.7592524140445 88-89 23.004316209352854 25.811120416877387 26.251486585767942 24.933076788001816 90-91 22.91073833531 25.800647844678053 26.31331582629025 24.975297993721693 92-93 23.008701257382917 25.62567379057832 26.40114219298897 24.964482759049794 94-95 22.83458124436367 25.5719878237975 26.417370092288984 25.17606083954985 96-97 22.71618968059226 25.448335028093116 26.50078154295335 25.334693748361275 98-99 22.55688422575997 25.37271334374508 26.412050098555056 25.658352331939895 100-101 22.491377263615135 25.406634677067846 26.451603363247226 25.65038469606979 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 47.0 1 38.5 2 53.0 3 84.0 4 81.0 5 81.5 6 124.0 7 263.0 8 416.5 9 453.0 10 399.0 11 354.0 12 351.5 13 367.5 14 408.5 15 457.0 16 517.5 17 581.5 18 673.0 19 764.0 20 878.0 21 1066.5 22 1276.5 23 1595.5 24 1996.5 25 2540.0 26 3455.5 27 4871.5 28 7019.5 29 10342.0 30 15349.5 31 22031.5 32 31499.0 33 40466.0 34 48297.0 35 57741.5 36 69140.5 37 81110.5 38 91778.5 39 101482.5 40 110036.0 41 118274.5 42 126536.5 43 134337.5 44 141501.0 45 149243.5 46 154834.5 47 158368.0 48 162350.5 49 163429.5 50 160269.0 51 156426.0 52 152544.0 53 148645.0 54 144288.0 55 134538.5 56 121495.0 57 108219.5 58 96120.5 59 83316.0 60 67930.5 61 55466.5 62 45650.5 63 34402.0 64 24095.5 65 17324.5 66 12841.5 67 9701.5 68 7217.0 69 5389.5 70 3915.0 71 2734.5 72 1927.5 73 1391.5 74 1036.0 75 698.0 76 454.0 77 277.5 78 154.5 79 91.5 80 53.0 81 35.0 82 22.0 83 14.0 84 6.5 85 4.5 86 6.0 87 3.0 88 2.0 89 3.0 90 2.5 91 1.5 92 0.5 93 1.0 94 1.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.16445290939308033 2 1.381957221790591E-4 3 0.012327058418372071 4 0.006108250920314412 5 0.02429480795907859 6 0.0019071009660710154 7 0.0 8 0.0 9 2.7639144435811816E-5 10-11 0.04893510522360482 12-13 4.4222631097298905E-4 14-15 0.005085602576189375 16-17 0.0 18-19 0.0014786942273159322 20-21 1.7965443883277682E-4 22-23 0.0 24-25 5.804220331520482E-4 26-27 0.0028606514491065233 28-29 0.005486370170508646 30-31 0.016846058533627306 32-33 0.01178809510187374 34-35 0.010489055313390585 36-37 0.0038694802210136547 38-39 0.0 40-41 0.0036621866377450655 42-43 0.008844526219459782 44-45 0.006716312097902272 46-47 0.0037312844988345952 48-49 0.009369669963740206 50-51 0.0028468318768886175 52-53 0.0022249511270828514 54-55 0.003980036798756902 56-57 0.0074487494254512855 58-59 0.014317076817750522 60-61 0.006882146964517142 62-63 0.02017657543814263 64-65 0.0383631324769068 66-67 0.05804220331520482 68-69 0.04811975046274838 70-71 0.06542185487956657 72-73 0.03188175310670893 74-75 0.02523453886989619 76-77 0.2217073970918645 78-79 0.08341493790728007 80-81 0.06381878450228949 82-83 0.025455652025382684 84-85 0.04977809912889708 86-87 0.06612665306267979 88-89 0.28682522138263716 90-91 0.29177262823664746 92-93 0.05128443250064883 94-95 0.009521685258137172 96-97 0.014745483556505604 98-99 7.877156164206369E-4 100-101 1.6583486661487091E-4 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 3618057.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 62.615845086126185 #Duplication Level Percentage of deduplicated Percentage of total 1 79.52148054066663 49.7930470655378 2 11.790819095557184 14.765842038518942 3 3.698499790166232 6.9475406973635705 4 1.6031543498808107 4.0153145768514475 5 0.9037721350932048 2.829522800207681 6 0.5564081585053868 2.090398023457803 7 0.37744830574784327 1.6543971248509421 8 0.26583533279472604 1.3316403213354695 9 0.19246956721367628 1.0846480144000776 >10 1.0274610797832804 11.218029602487894 >50 0.047712708331000594 2.0188047348633305 >100 0.01338868387382244 1.3779860374172404 >500 0.001063030220110152 0.4641350094317576 >1k 4.8722216608295315E-4 0.40869395327611396 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 8.291743330743546E-5 2 0.0 0.0 0.0 5.527828887162364E-5 8.291743330743546E-5 3 0.0 0.0 0.0 5.527828887162364E-5 8.291743330743546E-5 4 0.0 0.0 0.0 5.527828887162364E-5 8.291743330743546E-5 5 0.0 0.0 0.0 5.527828887162364E-5 8.291743330743546E-5 6 0.0 0.0 0.0 5.527828887162364E-5 1.6583486661487091E-4 7 0.0 0.0 0.0 5.527828887162364E-5 1.6583486661487091E-4 8 0.0 0.0 0.0 5.527828887162364E-5 1.6583486661487091E-4 9 0.0 0.0 0.0 1.1055657774324728E-4 1.9347401105068273E-4 10-11 0.0 0.0 0.0 1.381957221790591E-4 1.9347401105068273E-4 12-13 2.763914443581182E-5 0.0 0.0 1.381957221790591E-4 1.9347401105068273E-4 14-15 2.763914443581182E-5 0.0 0.0 1.381957221790591E-4 2.2111315548649455E-4 16-17 2.763914443581182E-5 0.0 0.0 1.6583486661487091E-4 2.2111315548649455E-4 18-19 2.763914443581182E-5 2.763914443581182E-5 0.0 1.9347401105068273E-4 3.0403058879393E-4 20-21 2.763914443581182E-5 2.763914443581182E-5 0.0 1.9347401105068273E-4 3.0403058879393E-4 22-23 2.763914443581182E-5 2.763914443581182E-5 0.0 2.0729358326858864E-4 3.3166973322974183E-4 24-25 2.763914443581182E-5 2.763914443581182E-5 0.0 3.3166973322974183E-4 3.5930887766555365E-4 26-27 2.763914443581182E-5 2.763914443581182E-5 0.0 6.495198942415778E-4 3.8694802210136547E-4 28-29 2.763914443581182E-5 2.763914443581182E-5 0.0 0.002390785993697722 3.8694802210136547E-4 30-31 2.763914443581182E-5 4.145871665371773E-5 0.0 0.010544333602262208 3.8694802210136547E-4 32-33 2.763914443581182E-5 5.527828887162364E-5 0.0 0.032102866262195426 4.422263109729891E-4 34-35 2.763914443581182E-5 5.527828887162364E-5 0.0 0.06102723091427249 4.975045998446127E-4 36-37 2.763914443581182E-5 5.527828887162364E-5 0.0 0.1076130088608333 4.975045998446127E-4 38-39 2.763914443581182E-5 6.909786108952955E-5 0.0 0.1866471423750372 5.389633164983305E-4 40-41 2.763914443581182E-5 8.291743330743546E-5 0.0 0.2776490254299476 5.527828887162364E-4 42-43 2.763914443581182E-5 8.291743330743546E-5 0.0 0.3729764345890626 5.666024609341422E-4 44-45 2.763914443581182E-5 8.291743330743546E-5 0.0 0.49219788411293686 5.942416053699542E-4 46-47 2.763914443581182E-5 8.291743330743546E-5 0.0 0.6326185574190788 6.0806117758786E-4 48-49 2.763914443581182E-5 8.291743330743546E-5 0.0 0.7782077507347176 6.0806117758786E-4 50-51 2.763914443581182E-5 8.291743330743546E-5 0.0 0.9326276506975981 6.0806117758786E-4 52-53 2.763914443581182E-5 8.291743330743546E-5 0.0 1.0942751869304437 6.909786108952955E-4 54-55 2.763914443581182E-5 8.291743330743546E-5 0.0 1.279982598394663 7.186177553311073E-4 56-57 2.763914443581182E-5 8.291743330743546E-5 0.0 1.4918780992118146 7.186177553311073E-4 58-59 2.763914443581182E-5 1.1055657774324728E-4 0.0 1.7170818480748091 7.186177553311073E-4 60-61 2.763914443581182E-5 1.1055657774324728E-4 0.0 1.9534656308620897 7.186177553311073E-4 62-63 2.763914443581182E-5 1.1055657774324728E-4 0.0 2.201499313029065 7.738960442027309E-4 64-65 2.763914443581182E-5 1.1055657774324728E-4 0.0 2.4758454606989333 7.738960442027309E-4 66-67 2.763914443581182E-5 1.381957221790591E-4 0.0 2.7877255665126337 7.738960442027309E-4 68-69 2.763914443581182E-5 1.381957221790591E-4 0.0 3.12345825397444 7.738960442027309E-4 70-71 4.145871665371773E-5 1.381957221790591E-4 0.0 3.4810120459683196 7.738960442027309E-4 72-73 5.527828887162364E-5 1.381957221790591E-4 0.0 3.8543892481517013 8.982721941638841E-4 74-75 5.527828887162364E-5 1.381957221790591E-4 0.0 4.25279369562171 9.950091996892255E-4 76-77 5.527828887162364E-5 1.381957221790591E-4 0.0 4.695406954616802 9.950091996892255E-4 78-79 5.527828887162364E-5 1.381957221790591E-4 0.0 5.182795627597907 9.950091996892255E-4 80-81 5.527828887162364E-5 1.381957221790591E-4 0.0 5.69257200757202 0.0010226483441250372 82-83 5.527828887162364E-5 1.381957221790591E-4 0.0 6.226891947805134 0.0011055657774324728 84-85 8.291743330743546E-5 1.381957221790591E-4 0.0 6.787206503380129 0.0011055657774324728 86-87 8.291743330743546E-5 1.381957221790591E-4 0.0 7.386312598170786 0.0011055657774324728 88-89 8.291743330743546E-5 1.381957221790591E-4 0.0 8.031202935719365 0.0011055657774324728 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 2615 0.0 43.986904 1 GTATCAA 4500 0.0 43.728798 1 TCAACGC 5630 0.0 33.97109 4 CAACGCA 5770 0.0 33.50177 5 ATCAACG 5990 0.0 32.167107 3 TATCAAC 6040 0.0 31.900824 2 AACGCAG 6355 0.0 30.263315 6 ACGCAGA 7580 0.0 24.682665 7 GTACATG 9120 0.0 24.338945 1 CGCAGAG 7950 0.0 23.175528 8 TACATGG 9435 0.0 22.63515 2 ACATGGG 9465 0.0 22.312702 3 CATGGGG 7930 0.0 20.34785 4 GCAGAGT 9165 0.0 19.015888 9 AGAGTAC 7905 0.0 17.150913 10-11 GTATTAG 955 0.0 16.92214 1 ATGGGGG 4510 0.0 16.533785 5 CAGAGTA 8525 0.0 15.513645 10-11 CTATACT 1515 0.0 15.349572 4 GTATACG 280 1.3309258E-5 15.277919 1 >>END_MODULE