##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2921692_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3567625 Sequences flagged as poor quality 0 Sequence length 101 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.35138082057391 33.0 31.0 34.0 28.0 34.0 2 31.48904243018815 34.0 31.0 34.0 28.0 34.0 3 31.561590974387723 34.0 31.0 34.0 28.0 34.0 4 35.034628078904035 37.0 35.0 37.0 32.0 37.0 5 34.77014680634876 37.0 35.0 37.0 32.0 37.0 6 34.743319995795524 37.0 35.0 37.0 32.0 37.0 7 34.628608948530186 37.0 35.0 37.0 32.0 37.0 8 34.57457243964823 37.0 35.0 37.0 32.0 37.0 9 36.158950282050384 39.0 37.0 39.0 32.0 39.0 10-11 36.05016138187169 39.0 37.0 39.0 31.5 39.0 12-13 35.97124753862864 39.0 37.0 39.0 31.0 39.0 14-15 37.2111647104166 40.0 38.0 41.0 31.0 41.0 16-17 37.17756742931222 40.0 38.0 41.0 31.0 41.0 18-19 37.13688434182404 40.0 38.0 41.0 31.0 41.0 20-21 37.07752944886304 40.0 38.0 41.0 31.0 41.0 22-23 36.98569005991381 40.0 37.5 41.0 31.0 41.0 24-25 36.89930738236222 40.0 37.0 41.0 30.0 41.0 26-27 36.775298272660386 40.0 37.0 41.0 30.0 41.0 28-29 36.65502680354578 40.0 37.0 41.0 30.0 41.0 30-31 36.501442836620996 40.0 37.0 41.0 30.0 41.0 32-33 36.45318173855156 40.0 37.0 41.0 30.0 41.0 34-35 36.58475568480432 40.0 37.0 41.0 30.0 41.0 36-37 36.585462037069476 40.0 37.0 41.0 30.0 41.0 38-39 36.48029277180197 40.0 37.0 41.0 30.0 41.0 40-41 36.4006116113661 40.0 37.0 41.0 30.0 41.0 42-43 36.28416663746891 40.0 36.5 41.0 29.0 41.0 44-45 36.15381465260502 40.0 36.0 41.0 28.5 41.0 46-47 36.00432276374339 40.0 36.0 41.0 28.0 41.0 48-49 35.86471041659367 40.0 35.5 41.0 28.0 41.0 50-51 35.711545916400965 40.0 35.0 41.0 27.5 41.0 52-53 35.53705252093479 39.0 35.0 41.0 27.0 41.0 54-55 35.320991556007144 39.0 35.0 41.0 26.5 41.0 56-57 35.095058196979785 39.0 35.0 41.0 26.0 41.0 58-59 34.85458869696227 38.5 35.0 40.5 26.0 41.0 60-61 34.57615808836411 38.0 34.5 40.0 26.0 41.0 62-63 34.27196650432711 37.5 34.0 40.0 25.5 41.0 64-65 33.93565999789776 37.0 34.0 40.0 24.5 41.0 66-67 33.58112792123612 36.5 34.0 39.0 23.0 41.0 68-69 33.2219636312673 36.0 34.0 39.0 23.0 41.0 70-71 32.82226733471147 35.0 33.0 38.5 22.0 40.0 72-73 32.46377211730493 35.0 33.0 37.5 21.5 40.0 74-75 32.060717283907366 35.0 33.0 37.0 20.5 39.0 76-77 29.36393258820644 33.0 29.0 34.5 13.5 36.5 78-79 30.93109267369749 34.5 31.5 36.0 17.5 37.0 80-81 31.113937563505132 35.0 32.0 35.5 18.0 37.0 82-83 30.94477054062577 35.0 32.0 35.0 18.0 37.0 84-85 30.748994358992327 35.0 32.0 35.0 16.0 36.0 86-87 30.54473101853474 35.0 32.0 35.0 11.5 36.0 88-89 30.278712729056444 35.0 32.0 35.0 7.0 36.0 90-91 30.087046704740548 34.5 31.5 35.0 2.0 35.0 92-93 29.934791913387755 34.0 31.0 35.0 2.0 35.0 94-95 29.834784765775552 34.0 31.0 35.0 2.0 35.0 96-97 29.638208051574928 34.0 31.0 35.0 2.0 35.0 98-99 29.44265526786027 34.0 31.0 35.0 2.0 35.0 100-101 28.335338775796224 33.0 29.0 34.5 2.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 69677.0 3 24154.0 4 12999.0 5 9098.0 6 7819.0 7 7804.0 8 8309.0 9 8877.0 10 9572.0 11 10430.0 12 11045.0 13 11702.0 14 12616.0 15 13346.0 16 14056.0 17 14948.0 18 14214.0 19 12899.0 20 12633.0 21 12499.0 22 13205.0 23 15265.0 24 17910.0 25 21685.0 26 25990.0 27 31310.0 28 37850.0 29 45622.0 30 55430.0 31 69506.0 32 88432.0 33 116431.0 34 166105.0 35 249386.0 36 441906.0 37 859171.0 38 905342.0 39 108381.0 40 1.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.77025638808398 19.446340319167664 13.648276572669026 26.13512672007933 2 14.909892258644284 20.790314433888383 38.003283983879435 26.296509323587898 3 17.669407628701077 24.995017154723865 28.99926245480048 28.336312761774586 4 13.099876297259955 16.979091069379773 35.47642093466348 34.44461169869679 5 14.328607448574566 37.23342423981592 34.227622467910535 14.210345843698983 6 33.49083563111779 35.62596021322094 17.0501352882791 13.833068867382167 7 28.918734452191586 31.642030762762342 21.20421849269472 18.235016292351354 8 26.594274902771453 35.03465190427806 19.80861217196314 18.56246102098735 9 26.706366280088297 15.749160856311972 19.17833292456466 38.36613993903507 10-11 25.61777328334303 25.30929502482058 27.836376962114525 21.236554729721867 12-13 26.18839863931544 22.666915385512343 27.642492914035593 23.502193061136627 14-15 23.409043287892413 24.17031481147962 24.701688389684236 27.718953510943734 16-17 23.75219140915755 27.231467325106664 25.479293014161104 23.53704825157468 18-19 23.785102796002494 26.713660299550774 26.610158635745762 22.89107826870097 20-21 24.324646290011355 25.909768214704965 26.481621319807196 23.28396417547648 22-23 24.16861357345573 25.633621807224692 26.242191934410148 23.95557268490943 24-25 24.016016358324674 25.876901925032286 26.14053835874372 23.96654335789932 26-27 23.808425944119865 26.01051035604756 26.218413361180804 23.962650338651766 28-29 23.92455067412022 26.160994161759422 26.07099934056123 23.843455823559133 30-31 24.22154864371304 25.926754504743176 25.862905653966422 23.98879119757736 32-33 24.00635733949911 25.99670527334275 25.77440303228106 24.222534354877073 34-35 24.268568513976447 26.029649856746133 25.887748567286145 23.814033061991267 36-37 24.33646780591171 25.834346069823244 25.9448442520833 23.884341872181746 38-39 24.179461126099298 25.9242212956799 25.879990189551872 24.01632738866893 40-41 24.32489782051674 25.806833194253564 25.93430351868551 23.93396546654419 42-43 24.198643959277852 25.781340886391014 25.77108101736413 24.24893413696701 44-45 24.063728535902314 25.780842334917082 25.924505130724036 24.23092399845657 46-47 24.247930196261347 25.79502720121273 25.729364751892646 24.227677850633274 48-49 24.02460807718141 25.898148283119593 25.789984761516045 24.287258878182953 50-51 24.093155938566348 25.944061756005247 25.806403237427865 24.156379068000533 52-53 24.315850801312887 25.724253735370045 25.7850237060348 24.174871757282272 54-55 23.84556702756136 25.67227842986492 26.013668204962247 24.468486337611477 56-57 23.9002099189912 25.783804323038932 25.90166563017676 24.41432012779311 58-59 24.02368205891163 25.652209077515174 25.918869128141903 24.40523973543129 60-61 23.97146351120751 25.767019751987636 26.01932099695503 24.24219573984982 62-63 23.99125731104 25.710217316826594 25.99778068478042 24.30074468735299 64-65 23.748439150494075 25.60927460772308 25.932450723704193 24.709835518078656 66-67 23.79925477586692 25.675931694939663 25.87710939644025 24.647704132753162 68-69 23.835699916331674 25.64367612855841 25.904440310494042 24.616183644615873 70-71 23.776159636418868 25.489961787573577 25.88324951619144 24.850629059816114 72-73 23.753514351958685 25.669566938748844 25.71663058500519 24.86028812428728 74-75 23.689036665197502 25.756325540030257 25.775951788960626 24.77868600581161 76-77 23.72734199021339 25.39101764882044 25.967198736472337 24.914441624493826 78-79 23.621521076612094 25.465444977194668 25.952200041154384 24.96083390503886 80-81 23.73603719208196 25.551675536950164 25.810814032578133 24.901473238389745 82-83 23.677442417955223 25.57259613362679 25.86579843831046 24.884163010107525 84-85 23.585824238846488 25.565966170331805 25.837069048924437 25.01114054189727 86-87 23.49012800274652 25.655678894749183 25.81406953144196 25.040123571062335 88-89 23.39911912651445 25.43077311027842 25.87607329573583 25.2940344674713 90-91 23.335172910922086 25.426879461655066 25.913838046700345 25.324109580722503 92-93 23.412297832284494 25.29701604861911 25.990010260089125 25.300675859007278 94-95 23.247946578883592 25.267567418691865 25.993386835370437 25.4910991670541 96-97 23.157430257713767 25.06758296732609 26.099738807214944 25.6752479677452 98-99 22.962650894699244 25.067205629113502 26.034383662609734 25.93575981357752 100-101 22.979334813966233 25.034823650566896 26.067459286916467 25.918382248550397 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 46.0 1 36.5 2 50.5 3 72.0 4 66.0 5 85.5 6 129.0 7 280.5 8 438.0 9 464.5 10 402.5 11 340.0 12 344.5 13 375.5 14 402.5 15 424.5 16 478.0 17 540.5 18 619.5 19 719.0 20 805.5 21 906.5 22 1084.5 23 1321.0 24 1607.5 25 2007.5 26 2665.5 27 3601.0 28 4999.5 29 7345.5 30 11017.0 31 16441.5 32 23953.5 33 31069.0 34 38156.5 35 47099.0 36 57972.5 37 69241.5 38 80307.0 39 90801.5 40 99344.5 41 107147.0 42 115874.5 43 125504.0 44 134484.5 45 142871.5 46 148599.5 47 153450.5 48 158430.5 49 160254.0 50 158777.5 51 157367.0 52 156476.5 53 155166.5 54 152292.5 55 144221.5 56 133249.0 57 119933.5 58 107760.0 59 93839.0 60 76741.5 61 63441.0 62 52135.5 63 40011.0 64 28805.5 65 21062.5 66 15759.0 67 12146.5 68 9290.5 69 6935.0 70 5241.5 71 3827.0 72 2645.0 73 1879.5 74 1369.5 75 973.0 76 663.0 77 391.0 78 204.0 79 123.0 80 81.5 81 52.0 82 32.0 83 18.5 84 13.5 85 12.0 86 7.5 87 6.0 88 5.5 89 3.0 90 3.0 91 2.0 92 1.0 93 0.5 94 0.5 95 1.5 96 1.5 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.16251708069093584 2 1.9620896254511053E-4 3 0.010819522791773239 4 0.005662030062016047 5 0.02679653831330367 6 0.0016257314039452016 7 0.0 8 0.0 9 0.0 10-11 0.04858974808170702 12-13 2.5226866612942787E-4 14-15 0.004835149434147367 16-17 1.4014925896079323E-5 18-19 0.001387477663711853 20-21 3.6438807329806244E-4 22-23 0.0 24-25 6.306716653235695E-4 26-27 0.0026908657720472306 28-29 0.005535895728951333 30-31 0.0170141200378403 32-33 0.011478224308888967 34-35 0.009992642163904558 36-37 0.004078343435759083 38-39 0.0 40-41 0.0035878210293963067 42-43 0.009193791387828037 44-45 0.006825268911390631 46-47 0.0038400896955257348 48-49 0.009558179461126099 50-51 0.0028450299569041026 52-53 0.0020601941067236607 54-55 0.00416243299113556 56-57 0.00831085105637504 58-59 0.015038015486493117 60-61 0.0073578360954416454 62-63 0.021274657510248415 64-65 0.04086752391296731 66-67 0.05943730072527242 68-69 0.04931852422830314 70-71 0.06793034581829649 72-73 0.033019165411162885 74-75 0.027273045793770365 76-77 0.22611681440734382 78-79 0.0840475105987877 80-81 0.06587015171157282 82-83 0.02732910549735468 84-85 0.05101433026172873 86-87 0.06696331593146701 88-89 0.29358466767106967 90-91 0.2984898917346975 92-93 0.05231771837006412 94-95 0.009712343645982972 96-97 0.014799761746259767 98-99 8.268806278686802E-4 100-101 1.8219403664903122E-4 >>END_MODULE >>Sequence Length Distribution pass #Length Count 101 3567625.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 57.27797753274471 #Duplication Level Percentage of deduplicated Percentage of total 1 76.68989064849133 43.92641833552935 2 12.564260047678802 14.393108094530168 3 4.34012657775676 7.457810178300598 4 2.003742767319589 4.590813328317245 5 1.1493076926795862 3.2915010099756 6 0.6918845572323404 2.377784887464421 7 0.48076341170008846 1.9276009125746354 8 0.3472203393793697 1.5910463038306826 9 0.25427362453757174 1.3107851058089341 >10 1.3932626591574608 14.08808276802306 >50 0.06491082383331807 2.4911344974887553 >100 0.01873625009647268 1.7043154344161735 >500 0.001080400096868505 0.42980648222172874 >1k 5.402000404132007E-4 0.4197926615186363 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 2.802985179215865E-5 2 0.0 0.0 0.0 0.0 2.802985179215865E-5 3 0.0 0.0 0.0 0.0 2.802985179215865E-5 4 0.0 0.0 0.0 2.802985179215865E-5 2.802985179215865E-5 5 0.0 0.0 0.0 2.802985179215865E-5 2.802985179215865E-5 6 0.0 0.0 0.0 2.802985179215865E-5 8.408955537647594E-5 7 0.0 0.0 0.0 2.802985179215865E-5 8.408955537647594E-5 8 0.0 0.0 0.0 2.802985179215865E-5 8.408955537647594E-5 9 0.0 0.0 0.0 5.60597035843173E-5 1.121194071686346E-4 10-11 0.0 0.0 0.0 5.60597035843173E-5 1.121194071686346E-4 12-13 0.0 0.0 0.0 5.60597035843173E-5 1.8219403664903122E-4 14-15 0.0 1.4014925896079325E-5 0.0 5.60597035843173E-5 2.802985179215865E-4 16-17 0.0 2.802985179215865E-5 0.0 8.408955537647596E-5 3.924179250902211E-4 18-19 0.0 2.802985179215865E-5 0.0 1.4014925896079324E-4 3.924179250902211E-4 20-21 0.0 2.802985179215865E-5 0.0 1.4014925896079324E-4 4.064328509863004E-4 22-23 0.0 5.60597035843173E-5 0.0 1.6817911075295188E-4 4.6249255457061773E-4 24-25 0.0 5.60597035843173E-5 0.0 2.3825374023334853E-4 5.045373322588557E-4 26-27 0.0 5.60597035843173E-5 0.0 5.746119617392523E-4 5.045373322588557E-4 28-29 0.0 5.60597035843173E-5 0.0 0.001962089625451105 5.045373322588557E-4 30-31 0.0 5.60597035843173E-5 0.0 0.009305910794996671 5.045373322588557E-4 32-33 0.0 5.60597035843173E-5 0.0 0.029123016012052836 5.045373322588557E-4 34-35 0.0 5.60597035843173E-5 0.0 0.05561122595564276 5.045373322588557E-4 36-37 0.0 7.007462948039662E-5 0.0 0.09709540660803756 5.045373322588557E-4 38-39 0.0 8.408955537647594E-5 0.0 0.1693984093059108 5.18552258154935E-4 40-41 0.0 8.408955537647594E-5 0.0 0.2545250691986966 5.60597035843173E-4 42-43 0.0 1.4014925896079324E-4 0.0 0.34329560982446305 5.886268876353316E-4 44-45 0.0 1.4014925896079324E-4 0.0 0.453172628849725 5.886268876353316E-4 46-47 0.0 1.4014925896079324E-4 0.0 0.5810167828737606 6.306716653235696E-4 48-49 0.0 1.4014925896079324E-4 0.0 0.7150835639956554 7.007462948039662E-4 50-51 0.0 1.4014925896079324E-4 0.0 0.8558074349181879 7.568059983882835E-4 52-53 0.0 1.4014925896079324E-4 0.0 1.0048561718229916 8.268806278686801E-4 54-55 0.0 1.6817911075295188E-4 0.0 1.1705406257664412 8.689254055569181E-4 56-57 0.0 1.6817911075295188E-4 0.0 1.3611996776567046 8.689254055569181E-4 58-59 0.0 1.6817911075295188E-4 0.0 1.5679618794015626 8.969552573490768E-4 60-61 0.0 1.6817911075295188E-4 0.0 1.7921866788129357 8.969552573490768E-4 62-63 0.0 1.6817911075295188E-4 0.0 2.021372761991521 9.810448127255528E-4 64-65 0.0 1.6817911075295188E-4 0.0 2.268175607021478 9.810448127255528E-4 66-67 0.0 1.6817911075295188E-4 0.0 2.558424722329281 9.810448127255528E-4 68-69 0.0 1.6817911075295188E-4 0.0 2.870915525034161 9.810448127255528E-4 70-71 0.0 1.6817911075295188E-4 0.0 3.204386671805473 0.00103710451630987 72-73 0.0 1.6817911075295188E-4 0.0 3.551017833993203 0.0011912687011667426 74-75 0.0 1.6817911075295188E-4 0.0 3.9168354297326653 0.0012613433306471393 76-77 0.0 1.6817911075295188E-4 0.0 4.323268280718965 0.0012613433306471393 78-79 0.0 1.6817911075295188E-4 0.0 4.777029536456325 0.0012613433306471393 80-81 0.0 1.6817911075295188E-4 0.0 5.254504046809853 0.0013174030342314566 82-83 0.0 1.6817911075295188E-4 0.0 5.746554080095302 0.001429522441400091 84-85 0.0 1.6817911075295188E-4 0.0 6.26137836796188 0.001429522441400091 86-87 0.0 1.6817911075295188E-4 0.0 6.813258119897691 0.0014575522931922498 88-89 0.0 1.6817911075295188E-4 0.0 7.408682246592621 0.0014855821449844084 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 2385 0.0 45.445354 1 GTATCAA 4610 0.0 42.38224 1 TCAACGC 5550 0.0 34.20751 4 CAACGCA 5655 0.0 33.599205 5 ATCAACG 5915 0.0 32.17734 3 TATCAAC 6125 0.0 31.229103 2 AACGCAG 6180 0.0 31.201263 6 GTACATG 9955 0.0 27.840067 1 TACATGG 10375 0.0 26.305119 2 ACGCAGA 7430 0.0 25.44069 7 ACATGGG 10695 0.0 25.074263 3 CGCAGAG 7700 0.0 24.363573 8 CATGGGG 8960 0.0 22.989851 4 ATGGGGG 5170 0.0 19.569994 5 GCAGAGT 9050 0.0 19.418068 9 AGAGTAC 7420 0.0 18.786983 10-11 GTACCGT 485 0.0 18.605719 6 TACCGTA 260 3.2895878E-7 18.266748 7 GAGTACA 7685 0.0 16.45435 1 TAAGGTG 1710 0.0 16.111408 5 >>END_MODULE